Ritonavir_CHP-212 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Ritonavir perturbation in CHP-212 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Ritonavir_CHP-212 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
NALF1 NALCN channel auxiliary factor 1 0.11087
PTPRD protein tyrosine phosphatase, receptor type, D 0.0882653
VCL vinculin 0.0879372
LSAMP limbic system-associated membrane protein 0.066185
IGFBP3 insulin-like growth factor binding protein 3 0.064072
VMP1 vacuole membrane protein 1 0.0622589
EXT1 exostosin glycosyltransferase 1 0.0558239
ZBTB20 zinc finger and BTB domain containing 20 0.0526535
LRFN5 leucine rich repeat and fibronectin type III domain containing 5 0.0488584
PACS1 phosphofurin acidic cluster sorting protein 1 0.0460849
NRG1 neuregulin 1 0.0454503
BCAS3 breast carcinoma amplified sequence 3 0.0447945
PTPRK protein tyrosine phosphatase, receptor type, K 0.0441555
PLPP1 phospholipid phosphatase 1 0.0428366
PDE10A phosphodiesterase 10A 0.0415614
NPAS2 neuronal PAS domain protein 2 0.0410298
CEMIP cell migration inducing protein, hyaluronan binding 0.0403744
CDH13 cadherin 13 0.0402395
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0390082
RBMS3 RNA binding motif, single stranded interacting protein 3 0.0389716
RAD51B RAD51 paralog B 0.0387168
ANTXR1 anthrax toxin receptor 1 0.0380196
THSD4 thrombospondin, type I, domain containing 4 0.0372757
ARID1B AT rich interactive domain 1B (SWI1-like) 0.0370157
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 0.0365797
MX2 MX dynamin-like GTPase 2 0.0350478
PDE3A phosphodiesterase 3A, cGMP-inhibited 0.0343959
MYCN v-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog 0.0342641
COL4A5 collagen, type IV, alpha 5 0.0338707
DNM3 dynamin 3 0.0337286
GLCCI1 glucocorticoid induced 1 0.032954
STK38L serine/threonine kinase 38 like 0.0314302
LPP LIM domain containing preferred translocation partner in lipoma 0.0310202
MAML2 mastermind-like 2 (Drosophila) 0.0308463
FRMD4A FERM domain containing 4A 0.0304816
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0304619
PTEN phosphatase and tensin homolog 0.0302079
KLHL13 kelch-like family member 13 0.0301432
PRKCA protein kinase C, alpha 0.0301161
RIGI RNA sensor RIG-I 0.0290858
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0285297
SIK2 salt-inducible kinase 2 0.0282291
RNF213 ring finger protein 213 0.0280988
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) 0.0277542
FN1 fibronectin 1 0.0276716
CRH corticotropin releasing hormone 0.027601
ST6GALNAC3 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 0.0270722
PTPRE protein tyrosine phosphatase, receptor type, E 0.0269198
EGR1 early growth response 1 0.0262948
GREM2 gremlin 2, DAN family BMP antagonist 0.0258273
SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 0.0255863
FNDC3A fibronectin type III domain containing 3A 0.0253533
SLIT2 slit homolog 2 (Drosophila) 0.0253419
FAM107B family with sequence similarity 107, member B 0.0248966
SENP6 SUMO1/sentrin specific peptidase 6 0.0246819
SLITRK6 SLIT and NTRK-like family, member 6 0.0243982
NR4A3 nuclear receptor subfamily 4, group A, member 3 0.0241194
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0236842
TRPS1 trichorhinophalangeal syndrome I 0.0233292
THSD7A thrombospondin, type I, domain containing 7A 0.0232424
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 0.0231583
ZNF804A zinc finger protein 804A 0.0229349
VCAN versican 0.0227983
CPED1 cadherin-like and PC-esterase domain containing 1 0.0224495
AKAP12 A kinase (PRKA) anchor protein 12 0.0220893
COL6A3 collagen, type VI, alpha 3 0.0217816
ARHGAP24 Rho GTPase activating protein 24 0.0217293
PLSCR1 phospholipid scramblase 1 0.0217124
SMAD6 SMAD family member 6 0.0216425
MAPK10 mitogen-activated protein kinase 10 0.0215024
MBD5 methyl-CpG binding domain protein 5 0.0212982
ZCCHC7 zinc finger, CCHC domain containing 7 0.0212452
PHF14 PHD finger protein 14 0.0212149
RAB7A RAB7A, member RAS oncogene family 0.021195
FHIT fragile histidine triad 0.0211047
CUX1 cut-like homeobox 1 0.0209397
CACNA2D1 calcium channel, voltage-dependent, alpha 2/delta subunit 1 0.0203992
LRP1B low density lipoprotein receptor-related protein 1B 0.0203334
FOXP1 forkhead box P1 0.0203187
FERMT2 fermitin family member 2 0.0199063
MCL1 myeloid cell leukemia 1 0.0197774
UBXN4 UBX domain protein 4 0.01969
BDKRB2 bradykinin receptor B2 0.0196046
OXR1 oxidation resistance 1 0.0193384
TNFRSF19 tumor necrosis factor receptor superfamily, member 19 0.0192284
SLFN5 schlafen family member 5 0.0191167
PTPRG protein tyrosine phosphatase, receptor type, G 0.0190238
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0189244
ATRX alpha thalassemia/mental retardation syndrome X-linked 0.0189005
DIAPH2 diaphanous-related formin 2 0.0186353
GAB2 GRB2-associated binding protein 2 0.0185686
RUNX1T1 runt-related transcription factor 1; translocated to, 1 (cyclin D-related) 0.0183653
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0182543
ADGRB3 adhesion G protein-coupled receptor B3 0.018089
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 0.0180249
SDK1 sidekick cell adhesion molecule 1 0.0180191
STXBP4 syntaxin binding protein 4 0.0180131
TBL1X transducin (beta)-like 1X-linked 0.0178287
CCAR1 cell division cycle and apoptosis regulator 1 0.0177165
PRRX1 paired related homeobox 1 0.0176939

decreased expression

Symbol Name Standardized Value
IGF2 insulin-like growth factor 2 -0.262589
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.160631
DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1 -0.104575
VIM vimentin -0.0926047
FAM13A family with sequence similarity 13, member A -0.0607562
LPIN1 lipin 1 -0.0606239
PTMA prothymosin, alpha -0.0493434
HELZ helicase with zinc finger -0.0493401
HAND2 heart and neural crest derivatives expressed 2 -0.0483789
DST dystonin -0.0440601
RPL38 ribosomal protein L38 -0.0423986
COL1A1 collagen, type I, alpha 1 -0.0405081
FNBP1 formin binding protein 1 -0.0403458
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0400372
NPEPPS aminopeptidase puromycin sensitive -0.038646
KDM3A lysine (K)-specific demethylase 3A -0.0374865
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0365062
SCN9A sodium channel, voltage gated, type IX alpha subunit -0.036165
FNDC3B fibronectin type III domain containing 3B -0.0353548
NEK7 NIMA-related kinase 7 -0.0350612
DSCAM Down syndrome cell adhesion molecule -0.0347977
SETD5 SET domain containing 5 -0.0343899
CLTC clathrin, heavy chain (Hc) -0.0338493
ZNF292 zinc finger protein 292 -0.0332261
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0323599
OGA O-GlcNAcase -0.0319699
XPO1 exportin 1 -0.0316365
WDR45B WD repeat domain 45B -0.0313178
ADAR adenosine deaminase, RNA-specific -0.0309844
FMN1 formin 1 -0.030582
LUC7L3 LUC7-like 3 (S. cerevisiae) -0.030544
NIPBL Nipped-B homolog (Drosophila) -0.0296802
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0296106
SYT1 synaptotagmin I -0.0287075
ZFAND3 zinc finger, AN1-type domain 3 -0.0281599
LMNA lamin A/C -0.0281069
SBF2 SET binding factor 2 -0.0277357
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0273532
EIF1 eukaryotic translation initiation factor 1 -0.0272298
PLAT plasminogen activator, tissue -0.0264291
ACSL3 acyl-CoA synthetase long-chain family member 3 -0.0262478
RPS6 ribosomal protein S6 -0.0260969
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0253658
MBNL2 muscleblind-like splicing regulator 2 -0.0247499
SQSTM1 sequestosome 1 -0.0244935
PKM pyruvate kinase, muscle -0.0243002
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0242318
PTK2 protein tyrosine kinase 2 -0.0240806
TNKS tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase -0.0240758
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0237004
RPS2 ribosomal protein S2 -0.0235048
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0232731
SMG7 SMG7 nonsense mediated mRNA decay factor -0.023196
NBAS neuroblastoma amplified sequence -0.0231252
FXR1 fragile X mental retardation, autosomal homolog 1 -0.0230384
BBX bobby sox homolog (Drosophila) -0.0229305
CDC27 cell division cycle 27 -0.0228424
ANXA2 annexin A2 -0.0225075
H3-3B H3.3 histone B -0.0224807
TMTC2 transmembrane and tetratricopeptide repeat containing 2 -0.021993
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0219657
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0217076
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 -0.0217042
GARS1 glycyl-tRNA synthetase 1 -0.0216395
SPTBN1 spectrin, beta, non-erythrocytic 1 -0.021608
MARCHF6 membrane associated ring-CH-type finger 6 -0.0213014
MEIS2 Meis homeobox 2 -0.0212608
PRTG protogenin -0.0211707
PPP3R1 protein phosphatase 3, regulatory subunit B, alpha -0.0211143
SLMAP sarcolemma associated protein -0.0210435
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.020966
MXI1 MAX interactor 1, dimerization protein -0.0206518
SPAG9 sperm associated antigen 9 -0.0204061
CNOT1 CCR4-NOT transcription complex, subunit 1 -0.0203897
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0202408
EPRS1 glutamyl-prolyl-tRNA synthetase 1 -0.020223
CLINT1 clathrin interactor 1 -0.0200994
PRRC2C proline-rich coiled-coil 2C -0.0200284
NAP1L1 nucleosome assembly protein 1-like 1 -0.0199209
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0198759
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0197627
UBC ubiquitin C -0.0197275
SSBP2 single-stranded DNA binding protein 2 -0.0195594
NF1 neurofibromin 1 -0.0195552
ANKS1B ankyrin repeat and sterile alpha motif domain containing 1B -0.0195477
PAPOLA poly(A) polymerase alpha -0.0195235
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0192378
UBE2O ubiquitin-conjugating enzyme E2O -0.0191341
CASC3 cancer susceptibility candidate 3 -0.0190181
FOXK2 forkhead box K2 -0.0189064
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha -0.0189011
LAMC1 laminin, gamma 1 (formerly LAMB2) -0.0188986
PIAS1 protein inhibitor of activated STAT, 1 -0.0188791
SRP54 signal recognition particle 54kDa -0.0188699
RUNX1 runt-related transcription factor 1 -0.0187929
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0187561
ZMYM2 zinc finger, MYM-type 2 -0.0186997
EPHA3 EPH receptor A3 -0.0186312
KMT2C lysine (K)-specific methyltransferase 2C -0.0185295
COL3A1 collagen, type III, alpha 1 -0.018461