Ritonavir_HepG2/C3A Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Ritonavir perturbation in HepG2/C3A cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Ritonavir_HepG2/C3A drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
SVIL supervillin 0.0281118
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) 0.0237217
TNS1 tensin 1 0.0225692
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0225414
ARHGAP9 Rho GTPase activating protein 9 0.0197858
RPS12 ribosomal protein S12 0.0194857
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.018987
FTH1 ferritin, heavy polypeptide 1 0.0178276
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0168414
CRY1 cryptochrome circadian clock 1 0.0166488
RPL37A ribosomal protein L37a 0.0163613
CAB39 calcium binding protein 39 0.0161639
EEF1B2 eukaryotic translation elongation factor 1 beta 2 0.0161457
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0158781
SERINC1 serine incorporator 1 0.0152291
ZEB1 zinc finger E-box binding homeobox 1 0.0151326
GAREM1 GRB2 associated regulator of MAPK1 subtype 1 0.0148407
JMJD1C jumonji domain containing 1C 0.0145819
ENKUR enkurin, TRPC channel interacting protein 0.0144825
CSGALNACT2 chondroitin sulfate N-acetylgalactosaminyltransferase 2 0.0141587
EIF1 eukaryotic translation initiation factor 1 0.0138842
SET SET nuclear proto-oncogene 0.0131454
IGFBP3 insulin-like growth factor binding protein 3 0.0130718
KALRN kalirin, RhoGEF kinase 0.0130508
ARHGAP5 Rho GTPase activating protein 5 0.0129353
CCNY cyclin Y 0.012823
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0123603
NRIP1 nuclear receptor interacting protein 1 0.012272
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0122187
UGDH UDP-glucose 6-dehydrogenase 0.0116363
RPL30 ribosomal protein L30 0.0115109
RPL37 ribosomal protein L37 0.0114828
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0113972
TMED2 transmembrane emp24 domain trafficking protein 2 0.0113907
SPIRE1 spire-type actin nucleation factor 1 0.0113824
SPDYA speedy/RINGO cell cycle regulator family member A 0.0112747
HM13 histocompatibility (minor) 13 0.0112543
GDI2 GDP dissociation inhibitor 2 0.011187
FXR1 fragile X mental retardation, autosomal homolog 1 0.0111361
RPS3 ribosomal protein S3 0.0110579
RPS7 ribosomal protein S7 0.0109347
DNAJC1 DnaJ (Hsp40) homolog, subfamily C, member 1 0.0108775
TCIM transcriptional and immune response regulator 0.0108759
ZFC3H1 zinc finger, C3H1-type containing 0.0106525
FRK fyn-related Src family tyrosine kinase 0.0105822
KANSL3 KAT8 regulatory NSL complex subunit 3 0.0105375
TFF1 trefoil factor 1 0.0105227
SEC24D SEC24 family member D 0.0103309
AGFG1 ArfGAP with FG repeats 1 0.0101055
EFL1 elongation factor like GTPase 1 0.0100617
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0100253
RPS17 ribosomal protein S17 0.0100112
ZMIZ1 zinc finger, MIZ-type containing 1 0.0100047
ERN1 endoplasmic reticulum to nucleus signaling 1 0.00999476
RELL1 RELT-like 1 0.00992504
RAB2A RAB2A, member RAS oncogene family 0.0099005
PSMF1 proteasome (prosome, macropain) inhibitor subunit 1 (PI31) 0.00989598
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.00983078
SP3 Sp3 transcription factor 0.00979072
RANBP9 RAN binding protein 9 0.00976724
SMAP1 small ArfGAP 1 0.00967072
PPIL4 peptidylprolyl isomerase (cyclophilin)-like 4 0.00961001
PAWR PRKC, apoptosis, WT1, regulator 0.00950362
RPS27 ribosomal protein S27 0.00945653
PLAC8 placenta-specific 8 0.00932388
KRT19 keratin 19, type I 0.00920905
OSBPL2 oxysterol binding protein-like 2 0.00918476
RBP1 retinol binding protein 1, cellular 0.00909544
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.00899104
QSOX1 quiescin Q6 sulfhydryl oxidase 1 0.00892757
SLC41A2 solute carrier family 41 (magnesium transporter), member 2 0.00872657
KIF5B kinesin family member 5B 0.0086728
RASGRF2 Ras protein-specific guanine nucleotide-releasing factor 2 0.00862141
USP47 ubiquitin specific peptidase 47 0.00861078
TMF1 TATA element modulatory factor 1 0.00856477
S100A6 S100 calcium binding protein A6 0.00846445
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0084205
SLU7 SLU7 splicing factor homolog (S. cerevisiae) 0.00838459
ZBTB44 zinc finger and BTB domain containing 44 0.00833408
MORF4L2 mortality factor 4 like 2 0.00830579
RALGAPB Ral GTPase activating protein, beta subunit (non-catalytic) 0.00829948
AAK1 AP2 associated kinase 1 0.00820848
GRB10 growth factor receptor-bound protein 10 0.0081888
ALDH1A2 aldehyde dehydrogenase 1 family, member A2 0.0081591
TMEM39A transmembrane protein 39A 0.0081381
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.00813233
ITGA6 integrin, alpha 6 0.00812755
S100P S100 calcium binding protein P 0.00810191
JAK1 Janus kinase 1 0.00810104
IARS1 isoleucyl-tRNA synthetase 1 0.00807493
RSL1D1 ribosomal L1 domain containing 1 0.00805833
RPL31 ribosomal protein L31 0.00804537
NFE2L1 nuclear factor, erythroid 2-like 1 0.00801743
PSMD11 proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 0.00801461
SLK STE20-like kinase 0.00793547
MAST4 microtubule associated serine/threonine kinase family member 4 0.00791645
AARS1 alanyl-tRNA synthetase 1 0.00790709
TCEA1 transcription elongation factor A (SII), 1 0.00790626
RRAS2 related RAS viral (r-ras) oncogene homolog 2 0.0078982
TMEM87A transmembrane protein 87A 0.00788926

decreased expression

Symbol Name Standardized Value
IGF2 insulin-like growth factor 2 -0.355688
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 -0.31752
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.241591
APOB apolipoprotein B -0.124686
C3 complement component 3 -0.0963098
SLC38A2 solute carrier family 38, member 2 -0.0959892
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 -0.0897765
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0890391
FN1 fibronectin 1 -0.0785462
GPC6 glypican 6 -0.0697842
APOA2 apolipoprotein A-II -0.0687416
FBF1 Fas (TNFRSF6) binding factor 1 -0.067045
GPC3 glypican 3 -0.0580837
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0566944
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0490679
FNDC3B fibronectin type III domain containing 3B -0.0473523
EHBP1 EH domain binding protein 1 -0.0460855
ZMYND8 zinc finger, MYND-type containing 8 -0.0459029
MT2A metallothionein 2A -0.045535
DST dystonin -0.043472
IGFBP1 insulin-like growth factor binding protein 1 -0.0431746
TM4SF1 transmembrane 4 L six family member 1 -0.0431279
ACSL4 acyl-CoA synthetase long-chain family member 4 -0.0424449
TRIM26 tripartite motif containing 26 -0.0416072
GMDS GDP-mannose 4,6-dehydratase -0.0412339
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0403845
RPS6 ribosomal protein S6 -0.040173
FTL ferritin, light polypeptide -0.0393352
LRMDA leucine rich melanocyte differentiation associated -0.0392463
TRIO trio Rho guanine nucleotide exchange factor -0.0384592
FRMD5 FERM domain containing 5 -0.0369337
TIMP1 TIMP metallopeptidase inhibitor 1 -0.0358659
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0349817
TMEM123 transmembrane protein 123 -0.0348594
SAMD4A sterile alpha motif domain containing 4A -0.034198
NPAS2 neuronal PAS domain protein 2 -0.0331865
GNAS GNAS complex locus -0.0329677
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.0324724
DOCK4 dedicator of cytokinesis 4 -0.032021
ROCK2 Rho-associated, coiled-coil containing protein kinase 2 -0.0317642
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0305478
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase -0.030305
EML4 echinoderm microtubule associated protein like 4 -0.0297598
APOE apolipoprotein E -0.0289686
EXT1 exostosin glycosyltransferase 1 -0.0287966
RERE arginine-glutamic acid dipeptide (RE) repeats -0.0284262
FMNL2 formin-like 2 -0.0282316
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 -0.0278439
TF transferrin -0.0272523
ACTN4 actinin, alpha 4 -0.0272188
PEG3 paternally expressed 3 -0.0271593
LYZ lysozyme -0.0266894
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) -0.0266464
ACSL3 acyl-CoA synthetase long-chain family member 3 -0.0262631
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0261792
PDIA3 protein disulfide isomerase family A, member 3 -0.0261298
FARP1 FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived) -0.0260013
PTCHD4 patched domain containing 4 -0.025988
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0258263
TPT1 tumor protein, translationally-controlled 1 -0.0254503
A2M alpha-2-macroglobulin -0.0253518
PTPRM protein tyrosine phosphatase, receptor type, M -0.0253024
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0251877
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0249852
HELZ helicase with zinc finger -0.0240269
AHNAK AHNAK nucleoprotein -0.0236714
PTMA prothymosin, alpha -0.0235908
MSI2 musashi RNA-binding protein 2 -0.0235329
DDIT4 DNA-damage-inducible transcript 4 -0.0235126
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0234945
MAML2 mastermind-like 2 (Drosophila) -0.0230821
PKM pyruvate kinase, muscle -0.0228237
ZBTB20 zinc finger and BTB domain containing 20 -0.0222735
CMIP c-Maf inducing protein -0.0221867
ANKRD12 ankyrin repeat domain 12 -0.0220592
DSPP dentin sialophosphoprotein -0.0219216
RRBP1 ribosome binding protein 1 -0.0218583
UBE2D2 ubiquitin-conjugating enzyme E2D 2 -0.021803
RBM39 RNA binding motif protein 39 -0.0214428
APOA1 apolipoprotein A-I -0.0214198
PTBP3 polypyrimidine tract binding protein 3 -0.0212749
SFTPA2 surfactant protein A2 -0.0211908
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0210017
MAN1A1 mannosidase, alpha, class 1A, member 1 -0.0209992
RPS5 ribosomal protein S5 -0.0209015
SCN9A sodium channel, voltage gated, type IX alpha subunit -0.0201643
ELL2 elongation factor, RNA polymerase II, 2 -0.020028
KRT8 keratin 8, type II -0.0199744
ATXN1 ataxin 1 -0.0197661
MAP4K3 mitogen-activated protein kinase kinase kinase kinase 3 -0.0196925
MYH9 myosin, heavy chain 9, non-muscle -0.0195322
ATP1A4 ATPase, Na+/K+ transporting, alpha 4 polypeptide -0.0195277
WSB1 WD repeat and SOCS box containing 1 -0.0195224
IER3 immediate early response 3 -0.019487
H1-0 H1.0 linker histone -0.0194431
NIPBL Nipped-B homolog (Drosophila) -0.019245
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0191963
PTPRK protein tyrosine phosphatase, receptor type, K -0.0189399
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) -0.0186656
TRAM1 translocation associated membrane protein 1 -0.0186568