Ritonavir_MIA PaCa-2 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Ritonavir perturbation in MIA PaCa-2 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Ritonavir_MIA PaCa-2 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0988229
DST dystonin 0.0575981
TXNIP thioredoxin interacting protein 0.0479407
CANX calnexin 0.0427285
TTC3 tetratricopeptide repeat domain 3 0.0388087
ENO1 enolase 1, (alpha) 0.031902
PTMA prothymosin, alpha 0.0317155
ESYT2 extended synaptotagmin-like protein 2 0.0305644
P4HB prolyl 4-hydroxylase, beta polypeptide 0.029857
PDIA3 protein disulfide isomerase family A, member 3 0.0297843
SPAG9 sperm associated antigen 9 0.02972
EZR ezrin 0.0270388
ACBD3 acyl-CoA binding domain containing 3 0.0263945
CAMTA1 calmodulin binding transcription activator 1 0.0262199
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.0256378
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0249489
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0248926
CEP350 centrosomal protein 350kDa 0.0246295
PDIA6 protein disulfide isomerase family A, member 6 0.0245258
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 0.0244868
GOLGA4 golgin A4 0.0241059
XPO1 exportin 1 0.0236642
PGK1 phosphoglycerate kinase 1 0.0233825
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.022859
SLK STE20-like kinase 0.0224712
IBTK inhibitor of Bruton agammaglobulinemia tyrosine kinase 0.0218073
CDK13 cyclin-dependent kinase 13 0.0211998
RPLP1 ribosomal protein, large, P1 0.0210701
ITSN2 intersectin 2 0.0207846
CALR calreticulin 0.0204357
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0203712
DDX41 DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 0.019631
KLHL24 kelch-like family member 24 0.0195379
TPM4 tropomyosin 4 0.0194218
PCM1 pericentriolar material 1 0.0194184
ERC1 ELKS/RAB6-interacting/CAST family member 1 0.0185639
RAB1A RAB1A, member RAS oncogene family 0.0183483
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0178224
RPS6 ribosomal protein S6 0.0172435
RPS29 ribosomal protein S29 0.0172172
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0170608
KMT2C lysine (K)-specific methyltransferase 2C 0.0169165
VMP1 vacuole membrane protein 1 0.0168922
N4BP2L2 NEDD4 binding protein 2-like 2 0.0162679
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0161523
KIF5B kinesin family member 5B 0.0161247
F2R coagulation factor II (thrombin) receptor 0.0160832
GPBP1 GC-rich promoter binding protein 1 0.0160545
SEPTIN7 septin 7 0.0156121
RAB6A RAB6A, member RAS oncogene family 0.0155858
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 0.0153748
AVL9 AVL9 homolog (S. cerevisiase) 0.015262
HILPDA hypoxia inducible lipid droplet-associated 0.0149936
USP9X ubiquitin specific peptidase 9, X-linked 0.014887
SLC35F5 solute carrier family 35, member F5 0.0147735
HNRNPD heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) 0.0147365
PDS5A PDS5 cohesin associated factor A 0.0146878
ATF7IP activating transcription factor 7 interacting protein 0.0146752
OPTN optineurin 0.0146572
SRP54 signal recognition particle 54kDa 0.0145456
AKAP9 A kinase (PRKA) anchor protein 9 0.0143185
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.0142471
SUCO SUN domain containing ossification factor 0.0141567
AKAP12 A kinase (PRKA) anchor protein 12 0.0141221
SEC31A SEC31 homolog A (S. cerevisiae) 0.014069
KMT2E lysine (K)-specific methyltransferase 2E 0.0140673
SPIRE1 spire-type actin nucleation factor 1 0.0140115
SOS2 son of sevenless homolog 2 (Drosophila) 0.0140028
EIF2AK3 eukaryotic translation initiation factor 2-alpha kinase 3 0.0139966
NPEPPS aminopeptidase puromycin sensitive 0.0139949
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.0139931
SEC24D SEC24 family member D 0.0139225
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0138396
GOLGB1 golgin B1 0.0138091
RAB2A RAB2A, member RAS oncogene family 0.0136381
EPRS1 glutamyl-prolyl-tRNA synthetase 1 0.0135619
RPL38 ribosomal protein L38 0.0134564
RPS23 ribosomal protein S23 0.0134312
VCL vinculin 0.0133863
WNK1 WNK lysine deficient protein kinase 1 0.0133201
IFIH1 interferon induced with helicase C domain 1 0.0132811
NIBAN2 niban apoptosis regulator 2 0.0132084
RARS1 arginyl-tRNA synthetase 1 0.0131986
ZKSCAN1 zinc finger with KRAB and SCAN domains 1 0.0131722
SAMHD1 SAM domain and HD domain 1 0.0130926
KDELR2 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2 0.0128791
RPL37A ribosomal protein L37a 0.0128608
HLA-A major histocompatibility complex, class I, A 0.0128593
SETD5 SET domain containing 5 0.0128287
RNMT RNA (guanine-7-) methyltransferase 0.0127534
SDK1 sidekick cell adhesion molecule 1 0.0127302
CALU calumenin 0.0126105
MATR3 matrin 3 0.0125263
USP47 ubiquitin specific peptidase 47 0.0125178
APLP2 amyloid beta (A4) precursor-like protein 2 0.0124883
HLA-E major histocompatibility complex, class I, E 0.0123621
PARP9 poly (ADP-ribose) polymerase family, member 9 0.0123541
ARFGEF2 ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) 0.0122096
LYST lysosomal trafficking regulator 0.0120472
ARID4B AT rich interactive domain 4B (RBP1-like) 0.0118647

decreased expression

Symbol Name Standardized Value
MT2A metallothionein 2A -0.19014
VIM vimentin -0.125813
TM4SF1 transmembrane 4 L six family member 1 -0.12296
TMSB10 thymosin beta 10 -0.0900861
PSD3 pleckstrin and Sec7 domain containing 3 -0.0818851
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 -0.0683025
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0678721
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0632419
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 -0.0553322
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0543232
SLC38A2 solute carrier family 38, member 2 -0.052872
MT1X metallothionein 1X -0.0528705
CD44 CD44 molecule (Indian blood group) -0.0512844
TXNRD1 thioredoxin reductase 1 -0.051166
SDCCAG8 serologically defined colon cancer antigen 8 -0.0438465
RAI1 retinoic acid induced 1 -0.0430474
EHBP1 EH domain binding protein 1 -0.0427033
TMSB4X thymosin beta 4, X-linked -0.0395452
EGR1 early growth response 1 -0.0375548
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0360628
RPLP0 ribosomal protein, large, P0 -0.0359553
ZBTB38 zinc finger and BTB domain containing 38 -0.0357882
HMGA1 high mobility group AT-hook 1 -0.0352285
CMIP c-Maf inducing protein -0.0349883
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0349682
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 -0.0347472
DNER delta/notch-like EGF repeat containing -0.0345294
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.034495
KLF6 Kruppel-like factor 6 -0.0332508
RPL12 ribosomal protein L12 -0.0322521
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 -0.0314713
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.0308103
MT1E metallothionein 1E -0.0304837
PTK2 protein tyrosine kinase 2 -0.0304497
BCAR3 breast cancer anti-estrogen resistance 3 -0.0303826
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0302634
TPT1 tumor protein, translationally-controlled 1 -0.0299215
RPS3 ribosomal protein S3 -0.0299051
RPL26 ribosomal protein L26 -0.0294408
LOC112694756 uncharaterized LOC112694756 -0.0294038
EEF2 eukaryotic translation elongation factor 2 -0.0291691
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.028923
STK17A serine/threonine kinase 17a -0.0287326
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0284673
ZMYND8 zinc finger, MYND-type containing 8 -0.028301
DENND1A DENN/MADD domain containing 1A -0.0281387
S100A6 S100 calcium binding protein A6 -0.0278412
APP amyloid beta (A4) precursor protein -0.0273628
BABAM2 BRISC and BRCA1 A complex member 2 -0.027169
RUNX1 runt-related transcription factor 1 -0.0268125
ZEB1 zinc finger E-box binding homeobox 1 -0.0264487
RPL18 ribosomal protein L18 -0.026371
NPAS2 neuronal PAS domain protein 2 -0.0261597
NEK10 NIMA-related kinase 10 -0.0258403
FMNL2 formin-like 2 -0.0254458
RPL23 ribosomal protein L23 -0.0251916
IFI6 interferon, alpha-inducible protein 6 -0.0251681
PODXL podocalyxin-like -0.0248162
RPL19 ribosomal protein L19 -0.0247426
ANKRD12 ankyrin repeat domain 12 -0.0243087
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0237831
THSD4 thrombospondin, type I, domain containing 4 -0.0233899
FLNB filamin B, beta -0.0233284
RPS4X ribosomal protein S4, X-linked -0.023197
RBM25 RNA binding motif protein 25 -0.0227535
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 -0.0225348
TSC22D1 TSC22 domain family, member 1 -0.022396
ZDHHC14 zinc finger, DHHC-type containing 14 -0.022177
EREG epiregulin -0.0219291
PTPRF protein tyrosine phosphatase, receptor type, F -0.0219273
PRRC2B proline-rich coiled-coil 2B -0.0217685
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.021653
PDE10A phosphodiesterase 10A -0.0215944
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0215932
CAPN2 calpain 2, (m/II) large subunit -0.0209352
TP63 tumor protein p63 -0.0209242
ACTG1 actin gamma 1 -0.0206051
DLG1 discs, large homolog 1 (Drosophila) -0.0202948
OSMR oncostatin M receptor -0.0200918
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 -0.0197277
SPRY4 sprouty homolog 4 (Drosophila) -0.0192901
AHNAK AHNAK nucleoprotein -0.0190867
FBXO11 F-box protein 11 -0.01899
ARB2A ARB2 cotranscriptional regulator A -0.0187549
SERPINB9 serpin peptidase inhibitor, clade B (ovalbumin), member 9 -0.0183865
MCTP1 multiple C2 domains, transmembrane 1 -0.0181845
TRIO trio Rho guanine nucleotide exchange factor -0.0180919
PLSCR1 phospholipid scramblase 1 -0.017964
TPI1 triosephosphate isomerase 1 -0.0178203
ANGPTL4 angiopoietin-like 4 -0.0176263
WDR27 WD repeat domain 27 -0.0174315
RASAL2 RAS protein activator like 2 -0.0172401
COMMD10 COMM domain containing 10 -0.0171172
KRT18 keratin 18, type I -0.0170706
BMERB1 bMERB domain containing 1 -0.0169983
EIF5B eukaryotic translation initiation factor 5B -0.0169144
GSK3B glycogen synthase kinase 3 beta -0.0167198
FNDC3B fibronectin type III domain containing 3B -0.0164021
RERE arginine-glutamic acid dipeptide (RE) repeats -0.0162374
NT5E 5'-nucleotidase, ecto (CD73) -0.0161981