Ritonavir_NCI-H2030 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Ritonavir perturbation in NCI-H2030 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Ritonavir_NCI-H2030 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
MT2A metallothionein 2A 0.135864
SAMD4A sterile alpha motif domain containing 4A 0.104627
POTEF POTE ankyrin domain family, member F 0.0982492
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.088374
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0836186
TPM3 tropomyosin 3 0.0813407
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0664355
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) 0.0658409
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.060961
IGFBP3 insulin-like growth factor binding protein 3 0.0598488
APLP2 amyloid beta (A4) precursor-like protein 2 0.0526931
IL6 interleukin 6 0.0510339
SOD2 superoxide dismutase 2, mitochondrial 0.0506608
WAC WW domain containing adaptor with coiled-coil 0.0501866
RPS27A ribosomal protein S27a 0.0495183
ENO1 enolase 1, (alpha) 0.0493521
PCBP2 poly(rC) binding protein 2 0.0480533
DOCK4 dedicator of cytokinesis 4 0.0480029
DOCK5 dedicator of cytokinesis 5 0.0471993
EEF2 eukaryotic translation elongation factor 2 0.0458216
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.0450638
FTH1 ferritin, heavy polypeptide 1 0.0446267
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0444678
COPA coatomer protein complex, subunit alpha 0.0437987
MSN moesin 0.0437402
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0407646
ARHGAP26 Rho GTPase activating protein 26 0.0404621
FMNL2 formin-like 2 0.0398581
FAM107B family with sequence similarity 107, member B 0.0398564
FLNB filamin B, beta 0.0397955
UBA6 ubiquitin-like modifier activating enzyme 6 0.0388156
ERBIN erbb2 interacting protein 0.0386043
HDGF hepatoma-derived growth factor 0.0385285
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0383672
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0378937
UBC ubiquitin C 0.0370495
KTN1 kinectin 1 (kinesin receptor) 0.0365997
CHD1 chromodomain helicase DNA binding protein 1 0.0360576
AKAP12 A kinase (PRKA) anchor protein 12 0.0355967
CYP24A1 cytochrome P450, family 24, subfamily A, polypeptide 1 0.0352616
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0352568
CDCP1 CUB domain containing protein 1 0.0347807
ITGB5 integrin, beta 5 0.0336311
LAMC2 laminin, gamma 2 0.0329805
BRD2 bromodomain containing 2 0.0329158
PLS3 plastin 3 0.0327956
ZBTB20 zinc finger and BTB domain containing 20 0.0326305
B2M beta-2-microglobulin 0.031677
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0305891
CCL5 chemokine (C-C motif) ligand 5 0.0305473
EGFR epidermal growth factor receptor 0.0304292
CFLAR CASP8 and FADD-like apoptosis regulator 0.0303782
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0300884
GLG1 golgi glycoprotein 1 0.0298956
PYGL phosphorylase, glycogen, liver 0.0298928
DIAPH1 diaphanous-related formin 1 0.0297904
ACTN1 actinin, alpha 1 0.0297125
HLA-A major histocompatibility complex, class I, A 0.0295505
BCLAF1 BCL2-associated transcription factor 1 0.0292822
GRAMD1B GRAM domain containing 1B 0.0290113
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 0.0289534
SRRM2 serine/arginine repetitive matrix 2 0.0287939
AP1G1 adaptor-related protein complex 1, gamma 1 subunit 0.0285574
RPL3 ribosomal protein L3 0.0285216
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.0285145
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.028324
MCL1 myeloid cell leukemia 1 0.0280454
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 0.0278526
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0276554
PTBP2 polypyrimidine tract binding protein 2 0.0276521
AKAP13 A kinase (PRKA) anchor protein 13 0.0276167
ACTR3 ARP3 actin-related protein 3 homolog (yeast) 0.0275549
MYH9 myosin, heavy chain 9, non-muscle 0.0275405
TJP1 tight junction protein 1 0.027394
BCAR3 breast cancer anti-estrogen resistance 3 0.0269654
RANBP9 RAN binding protein 9 0.0264832
ITCH itchy E3 ubiquitin protein ligase 0.0263027
FNDC3B fibronectin type III domain containing 3B 0.0260912
MT1X metallothionein 1X 0.0260117
SFPQ splicing factor proline/glutamine-rich 0.0258492
EDIL3 EGF-like repeats and discoidin I-like domains 3 0.0257703
HLA-B major histocompatibility complex, class I, B 0.025727
IBTK inhibitor of Bruton agammaglobulinemia tyrosine kinase 0.0252948
AXL AXL receptor tyrosine kinase 0.0252318
RPS2 ribosomal protein S2 0.0248788
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 0.024506
ANXA5 annexin A5 0.0244262
BIRC3 baculoviral IAP repeat containing 3 0.024342
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0239042
RAB18 RAB18, member RAS oncogene family 0.0236769
NEBL nebulette 0.0234299
RBM25 RNA binding motif protein 25 0.0232837
JMJD1C jumonji domain containing 1C 0.0232312
RNF145 ring finger protein 145 0.0232247
CCNL1 cyclin L1 0.023055
BIRC6 baculoviral IAP repeat containing 6 0.0230213
SREK1 splicing regulatory glutamine/lysine-rich protein 1 0.0228899
CXCL8 chemokine (C-X-C motif) ligand 8 0.022694
ARHGAP29 Rho GTPase activating protein 29 0.0226625
PTPN14 protein tyrosine phosphatase, non-receptor type 14 0.0225787

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.211749
VIM vimentin -0.182261
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.146049
TFPI2 tissue factor pathway inhibitor 2 -0.12072
TMSB10 thymosin beta 10 -0.103781
TM4SF1 transmembrane 4 L six family member 1 -0.0971481
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.0963136
FTL ferritin, light polypeptide -0.0854071
TXNRD1 thioredoxin reductase 1 -0.0833398
ACTG1 actin gamma 1 -0.0763996
IGF2 insulin-like growth factor 2 -0.0741891
RPS21 ribosomal protein S21 -0.0676498
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0676286
RPL19 ribosomal protein L19 -0.0627538
SLC38A2 solute carrier family 38, member 2 -0.0591919
DENND4A DENN/MADD domain containing 4A -0.0583941
TPT1 tumor protein, translationally-controlled 1 -0.0556448
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0554864
RAD21 RAD21 homolog (S. pombe) -0.0545725
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0497672
HDAC9 histone deacetylase 9 -0.046724
BICC1 BicC family RNA binding protein 1 -0.0464547
IER3 immediate early response 3 -0.0462241
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0446089
KLF6 Kruppel-like factor 6 -0.0445839
TMEM123 transmembrane protein 123 -0.0440929
SMAD2 SMAD family member 2 -0.0418342
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon -0.0413875
RERE arginine-glutamic acid dipeptide (RE) repeats -0.0397187
RPS19 ribosomal protein S19 -0.0392873
KYNU kynureninase -0.0390001
PDE4D phosphodiesterase 4D, cAMP-specific -0.0389044
EIF3H eukaryotic translation initiation factor 3, subunit H -0.0388952
RPL23 ribosomal protein L23 -0.0382346
AP2B1 adaptor-related protein complex 2, beta 1 subunit -0.0378072
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0375155
SERF2 small EDRK-rich factor 2 -0.035296
GNAS GNAS complex locus -0.0351363
RPL35A ribosomal protein L35a -0.0350432
RPL32 ribosomal protein L32 -0.0349097
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0346666
AK1 adenylate kinase 1 -0.0342743
RPL8 ribosomal protein L8 -0.0342732
FUS FUS RNA binding protein -0.034205
RPL7 ribosomal protein L7 -0.0329977
RPL4 ribosomal protein L4 -0.0328699
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0319434
RPL34 ribosomal protein L34 -0.0318257
RPLP1 ribosomal protein, large, P1 -0.0317926
PTMA prothymosin, alpha -0.0316161
HMGB1 high mobility group box 1 -0.0307331
BIRC2 baculoviral IAP repeat containing 2 -0.0306157
RHEB Ras homolog enriched in brain -0.0296244
PTK2 protein tyrosine kinase 2 -0.0291523
SRGN serglycin -0.0289829
NAMPT nicotinamide phosphoribosyltransferase -0.0289119
RPL38 ribosomal protein L38 -0.0287724
ADGRG6 adhesion G protein-coupled receptor G6 -0.0284299
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0280259
CAVIN1 caveolae associated protein 1 -0.027866
FKBP10 FK506 binding protein 10, 65 kDa -0.027555
BASP1 brain abundant, membrane attached signal protein 1 -0.0275358
CHN1 chimerin 1 -0.0274506
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0272673
NQO1 NAD(P)H dehydrogenase, quinone 1 -0.0271359
BABAM2 BRISC and BRCA1 A complex member 2 -0.02707
ILF2 interleukin enhancer binding factor 2 -0.0269877
NCOA7 nuclear receptor coactivator 7 -0.0269809
SPIDR scaffolding protein involved in DNA repair -0.0265453
RPS24 ribosomal protein S24 -0.0264419
S100A10 S100 calcium binding protein A10 -0.0264252
USP34 ubiquitin specific peptidase 34 -0.0262246
RBM39 RNA binding motif protein 39 -0.0259029
TFRC transferrin receptor -0.0258332
RPS5 ribosomal protein S5 -0.0254939
UGDH UDP-glucose 6-dehydrogenase -0.025421
RPS8 ribosomal protein S8 -0.0254038
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0252208
RPL11 ribosomal protein L11 -0.0248934
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0246994
COTL1 coactosin-like F-actin binding protein 1 -0.0242789
CLTC clathrin, heavy chain (Hc) -0.0242164
RPS29 ribosomal protein S29 -0.0241752
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0241739
AGO2 argonaute RISC catalytic component 2 -0.0240967
CDK12 cyclin-dependent kinase 12 -0.0239935
PARK7 parkinson protein 7 -0.0237678
RPL6 ribosomal protein L6 -0.0237328
THSD4 thrombospondin, type I, domain containing 4 -0.0236915
AHNAK AHNAK nucleoprotein -0.0236222
SLC38A1 solute carrier family 38, member 1 -0.0235509
PSMC6 proteasome (prosome, macropain) 26S subunit, ATPase, 6 -0.0232451
RPLP2 ribosomal protein, large, P2 -0.022875
NABP1 nucleic acid binding protein 1 -0.0227323
BTBD7 BTB (POZ) domain containing 7 -0.0225673
KDM3A lysine (K)-specific demethylase 3A -0.0225549
HMGA1 high mobility group AT-hook 1 -0.0225118
IFRD1 interferon-related developmental regulator 1 -0.022401
PPP2CA protein phosphatase 2, catalytic subunit, alpha isozyme -0.0223381
NEGR1 neuronal growth regulator 1 -0.0223317