Ritonavir_NCI-H23 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Ritonavir perturbation in NCI-H23 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Ritonavir_NCI-H23 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
AKAP12 A kinase (PRKA) anchor protein 12 0.1716
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.140956
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.118856
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.10155
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0755349
ERRFI1 ERBB receptor feedback inhibitor 1 0.0742865
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 0.0708506
ENO1 enolase 1, (alpha) 0.060542
KTN1 kinectin 1 (kinesin receptor) 0.0583533
VMP1 vacuole membrane protein 1 0.0581159
TPM3 tropomyosin 3 0.0573732
KDM2A lysine (K)-specific demethylase 2A 0.0516015
PCBP2 poly(rC) binding protein 2 0.0492873
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0456943
GOLGA4 golgin A4 0.0426946
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0421991
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0415098
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0408807
GRAMD1B GRAM domain containing 1B 0.0408661
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0393338
CSNK1A1 casein kinase 1, alpha 1 0.0389303
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0387034
ATP11A ATPase, class VI, type 11A 0.0383121
RPL37 ribosomal protein L37 0.0380954
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0374034
TMEM165 transmembrane protein 165 0.0365198
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.0350743
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0346969
ZCCHC7 zinc finger, CCHC domain containing 7 0.0345549
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0337016
PGK1 phosphoglycerate kinase 1 0.0333385
RAB6A RAB6A, member RAS oncogene family 0.0328174
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0326961
PRELID2 PRELI domain containing 2 0.0324748
ATXN1 ataxin 1 0.0320884
CANX calnexin 0.0314661
YBX1 Y box binding protein 1 0.0304679
GOLGB1 golgin B1 0.0301228
TMEM41B transmembrane protein 41B 0.0295989
AKAP9 A kinase (PRKA) anchor protein 9 0.0293532
TPM4 tropomyosin 4 0.0292459
COPA coatomer protein complex, subunit alpha 0.0290806
FMNL2 formin-like 2 0.0281931
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0274499
PDIA3 protein disulfide isomerase family A, member 3 0.0273474
PDE4B phosphodiesterase 4B, cAMP-specific 0.0266003
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0264985
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0262751
KMT5B lysine methyltransferase 5B 0.025997
SSH2 slingshot protein phosphatase 2 0.0258182
TJP1 tight junction protein 1 0.0253798
NSD1 nuclear receptor binding SET domain protein 1 0.0253025
OGA O-GlcNAcase 0.0252992
ZNF638 zinc finger protein 638 0.0251418
CHD1L chromodomain helicase DNA binding protein 1-like 0.0250764
LDHA lactate dehydrogenase A 0.0246893
RNF145 ring finger protein 145 0.0244918
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 0.0244261
SOS2 son of sevenless homolog 2 (Drosophila) 0.0239911
SRRM2 serine/arginine repetitive matrix 2 0.0235831
TBK1 TANK-binding kinase 1 0.0235636
MNAT1 MNAT CDK-activating kinase assembly factor 1 0.0234653
NGLY1 N-glycanase 1 0.0234352
SCAF11 SR-related CTD-associated factor 11 0.0232118
PTP4A2 protein tyrosine phosphatase type IVA, member 2 0.0230615
CDCP1 CUB domain containing protein 1 0.0229512
ZNF292 zinc finger protein 292 0.0228989
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 0.0227261
AAK1 AP2 associated kinase 1 0.0221194
APLP2 amyloid beta (A4) precursor-like protein 2 0.0220186
TM9SF3 transmembrane 9 superfamily member 3 0.0218891
WNK1 WNK lysine deficient protein kinase 1 0.0216748
NUP58 nucleoporin 58 0.0211356
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0209327
PPIG peptidylprolyl isomerase G (cyclophilin G) 0.0207648
CALU calumenin 0.0205855
PPP1R21 protein phosphatase 1, regulatory subunit 21 0.0205304
CBFA2T2 core-binding factor, runt domain, alpha subunit 2; translocated to, 2 0.0205173
SET SET nuclear proto-oncogene 0.0201861
TMF1 TATA element modulatory factor 1 0.0201433
RBM25 RNA binding motif protein 25 0.0200224
SMAP1 small ArfGAP 1 0.019982
XPO1 exportin 1 0.019893
PKM pyruvate kinase, muscle 0.0198308
ZNF148 zinc finger protein 148 0.0198175
LMAN1 lectin, mannose-binding, 1 0.0197476
RPS29 ribosomal protein S29 0.0196387
SEC24A SEC24 family member A 0.0196227
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0196206
RPLP0 ribosomal protein, large, P0 0.0195739
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.0195496
UBE2H ubiquitin-conjugating enzyme E2H 0.0195443
ITSN2 intersectin 2 0.019454
USP24 ubiquitin specific peptidase 24 0.0194362
FNDC3B fibronectin type III domain containing 3B 0.0191749
UBA6 ubiquitin-like modifier activating enzyme 6 0.0191695
PDE4D phosphodiesterase 4D, cAMP-specific 0.0191647
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0191208
DSPP dentin sialophosphoprotein 0.0190646
PPME1 protein phosphatase methylesterase 1 0.0189545

decreased expression

Symbol Name Standardized Value
VIM vimentin -0.0921898
TMSB10 thymosin beta 10 -0.0796142
TFPI2 tissue factor pathway inhibitor 2 -0.0771356
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0739949
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0710758
YBX3 Y box binding protein 3 -0.0698158
NABP1 nucleic acid binding protein 1 -0.0565092
TRIO trio Rho guanine nucleotide exchange factor -0.0476716
SLC38A2 solute carrier family 38, member 2 -0.0455111
IGF1R insulin-like growth factor 1 receptor -0.0450567
HMGA2 high mobility group AT-hook 2 -0.042539
KLF6 Kruppel-like factor 6 -0.0379281
EGR1 early growth response 1 -0.0366521
PPP6R3 protein phosphatase 6, regulatory subunit 3 -0.0365403
WNT2B wingless-type MMTV integration site family, member 2B -0.0357437
EGFR epidermal growth factor receptor -0.0326425
PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2 -0.032623
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0320051
TXNRD1 thioredoxin reductase 1 -0.0315375
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0307418
TM4SF1 transmembrane 4 L six family member 1 -0.0293093
RPL23 ribosomal protein L23 -0.0291213
E2F3 E2F transcription factor 3 -0.0275818
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0272027
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0265826
ADAR adenosine deaminase, RNA-specific -0.0264118
THSD4 thrombospondin, type I, domain containing 4 -0.0263956
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0262918
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.026222
PNPT1 polyribonucleotide nucleotidyltransferase 1 -0.0260701
INTS6 integrator complex subunit 6 -0.0255403
BICD1 bicaudal D homolog 1 (Drosophila) -0.0254606
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0252933
CDK12 cyclin-dependent kinase 12 -0.0251824
PTPRF protein tyrosine phosphatase, receptor type, F -0.0250076
AHNAK AHNAK nucleoprotein -0.024878
CRK v-crk avian sarcoma virus CT10 oncogene homolog -0.0243337
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0240882
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) -0.0233945
STC1 stanniocalcin 1 -0.0233097
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0229058
ST7L suppression of tumorigenicity 7 like -0.0227475
LARP4B La ribonucleoprotein domain family, member 4B -0.0227214
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0227085
TPT1 tumor protein, translationally-controlled 1 -0.0224088
RPS21 ribosomal protein S21 -0.0223956
RPL12 ribosomal protein L12 -0.0221857
DDAH1 dimethylarginine dimethylaminohydrolase 1 -0.022172
ZNFX1 zinc finger, NFX1-type containing 1 -0.0221574
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0218861
AEBP2 AE binding protein 2 -0.0218486
DNAH14 dynein, axonemal, heavy chain 14 -0.0217765
EXOC4 exocyst complex component 4 -0.0205036
SETX senataxin -0.0203991
ADIPOR2 adiponectin receptor 2 -0.0195322
RIGI RNA sensor RIG-I -0.0195248
GNAS GNAS complex locus -0.0194716
IER3 immediate early response 3 -0.0194211
THADA thyroid adenoma associated -0.0191299
FLNA filamin A, alpha -0.019092
SHANK2 SH3 and multiple ankyrin repeat domains 2 -0.0188352
FARS2 phenylalanyl-tRNA synthetase 2, mitochondrial -0.0184043
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0183788
AKT3 v-akt murine thymoma viral oncogene homolog 3 -0.0180513
PFN1 profilin 1 -0.0179621
TRIP12 thyroid hormone receptor interactor 12 -0.0177437
SMYD3 SET and MYND domain containing 3 -0.0173341
DHFR dihydrofolate reductase -0.0171518
RAD51B RAD51 paralog B -0.017133
EIF3H eukaryotic translation initiation factor 3, subunit H -0.0170116
IFIH1 interferon induced with helicase C domain 1 -0.0169125
SRSF6 serine/arginine-rich splicing factor 6 -0.0167704
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0167185
CRY1 cryptochrome circadian clock 1 -0.016544
ANKRD17 ankyrin repeat domain 17 -0.0165391
MYPN myopalladin -0.0163231
NFE2L2 nuclear factor, erythroid 2-like 2 -0.0163117
ATP5F1B ATP synthase F1 subunit beta -0.0162033
PLSCR1 phospholipid scramblase 1 -0.01617
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae) -0.0161514
FBXO11 F-box protein 11 -0.0161377
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0160387
TRIM56 tripartite motif containing 56 -0.0159966
SMAD3 SMAD family member 3 -0.0159086
KNTC1 kinetochore associated 1 -0.0158362
OSMR oncostatin M receptor -0.0157962
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0156355
PHF3 PHD finger protein 3 -0.0156354
GPHN gephyrin -0.0156324
NR4A1 nuclear receptor subfamily 4, group A, member 1 -0.0155514
STAT2 signal transducer and activator of transcription 2, 113kDa -0.0154748
SCLT1 sodium channel and clathrin linker 1 -0.0152751
PMP22 peripheral myelin protein 22 -0.0152739
WSB1 WD repeat and SOCS box containing 1 -0.0152103
EHBP1 EH domain binding protein 1 -0.0151218
PPP1R10 protein phosphatase 1, regulatory subunit 10 -0.0151122
TAS2R14 taste receptor, type 2, member 14 -0.0150716
MOB1A MOB kinase activator 1A -0.0149833
SFPQ splicing factor proline/glutamine-rich -0.0149712
ZBTB7A zinc finger and BTB domain containing 7A -0.0149364