Ritonavir_NCI-H460 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Ritonavir perturbation in NCI-H460 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Ritonavir_NCI-H460 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.0960023
TNFAIP3 tumor necrosis factor, alpha-induced protein 3 0.0651795
PDLIM5 PDZ and LIM domain 5 0.061979
IGFBP3 insulin-like growth factor binding protein 3 0.0553281
PDE3A phosphodiesterase 3A, cGMP-inhibited 0.0429463
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0349555
SMOC1 SPARC related modular calcium binding 1 0.0324379
FTH1 ferritin, heavy polypeptide 1 0.0320377
IL6 interleukin 6 0.0308026
CHL1 cell adhesion molecule L1-like 0.0289996
RPS12 ribosomal protein S12 0.0282221
ZEB2 zinc finger E-box binding homeobox 2 0.0271633
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0271013
LSAMP limbic system-associated membrane protein 0.0264512
MCL1 myeloid cell leukemia 1 0.0248495
EGR1 early growth response 1 0.02473
FNDC3A fibronectin type III domain containing 3A 0.0246546
P3H2 prolyl 3-hydroxylase 2 0.0236345
MT2A metallothionein 2A 0.0231821
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 0.023062
MAP7 microtubule-associated protein 7 0.0228227
CD109 CD109 molecule 0.0218413
POTEF POTE ankyrin domain family, member F 0.0217673
NTN4 netrin 4 0.0216416
FMNL2 formin-like 2 0.0214401
ADARB2 adenosine deaminase, RNA-specific, B2 (non-functional) 0.020794
PM20D1 peptidase M20 domain containing 1 0.0207761
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0195943
DPP10 dipeptidyl-peptidase 10 (non-functional) 0.019289
RPS2 ribosomal protein S2 0.0187615
TENM2 teneurin transmembrane protein 2 0.0181691
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0170294
ESM1 endothelial cell-specific molecule 1 0.0165976
FAM107B family with sequence similarity 107, member B 0.0163462
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0160259
VMP1 vacuole membrane protein 1 0.0159239
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.0158543
TXNIP thioredoxin interacting protein 0.0157977
RAPH1 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 0.0154314
BMP6 bone morphogenetic protein 6 0.0153887
SOX9 SRY (sex determining region Y)-box 9 0.015383
MAF v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog 0.0150497
DNER delta/notch-like EGF repeat containing 0.0149892
PCBP2 poly(rC) binding protein 2 0.0148563
XYLT1 xylosyltransferase I 0.0146868
AUTS2 autism susceptibility candidate 2 0.0143388
AXL AXL receptor tyrosine kinase 0.0140933
ASTN2 astrotactin 2 0.0140835
PCDH9 protocadherin 9 0.0138509
NIPA1 non imprinted in Prader-Willi/Angelman syndrome 1 0.0135453
DARS1 aspartyl-tRNA synthetase 1 0.0135164
ITPRID2 ITPR interacting domain containing 2 0.0135056
RAB27B RAB27B, member RAS oncogene family 0.0134546
NR4A2 nuclear receptor subfamily 4, group A, member 2 0.0130415
RPS7 ribosomal protein S7 0.0130263
RPL3 ribosomal protein L3 0.0129674
MYADM myeloid-associated differentiation marker 0.0129124
AKAP13 A kinase (PRKA) anchor protein 13 0.0128272
BTG1 B-cell translocation gene 1, anti-proliferative 0.0128117
WARS1 tryptophanyl-tRNA synthetase 1 0.012689
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.012605
ZMIZ1 zinc finger, MIZ-type containing 1 0.0124798
SLK STE20-like kinase 0.0123167
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0120552
RPL39 ribosomal protein L39 0.0119907
SRRM2 serine/arginine repetitive matrix 2 0.0119851
TMX4 thioredoxin-related transmembrane protein 4 0.0118282
SVIL supervillin 0.0117514
FOS FBJ murine osteosarcoma viral oncogene homolog 0.0116019
ESYT2 extended synaptotagmin-like protein 2 0.0115957
RPS27 ribosomal protein S27 0.0114173
EEF1G eukaryotic translation elongation factor 1 gamma 0.0114138
PGM2L1 phosphoglucomutase 2-like 1 0.0114117
OLFML2A olfactomedin-like 2A 0.0113412
TENM3 teneurin transmembrane protein 3 0.0111339
GLRX glutaredoxin (thioltransferase) 0.0110745
ITGB8 integrin, beta 8 0.0110158
SCARA5 scavenger receptor class A, member 5 0.0109314
NRXN3 neurexin 3 0.0108494
RAP2B RAP2B, member of RAS oncogene family 0.0108441
SHC1 SHC (Src homology 2 domain containing) transforming protein 1 0.0107092
NBEAL1 neurobeachin-like 1 0.0103684
ID2 inhibitor of DNA binding 2, dominant negative helix-loop-helix protein 0.0103505
MT1X metallothionein 1X 0.0103457
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0102534
IL6R interleukin 6 receptor 0.0101062
HMGA2 high mobility group AT-hook 2 0.0100816
RPLP0 ribosomal protein, large, P0 0.0100693
MSN moesin 0.0100686
LGALS3 lectin, galactoside-binding, soluble, 3 0.0100549
TGFBR1 transforming growth factor, beta receptor 1 0.010029
LAMA5 laminin, alpha 5 0.010022
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 0.00984075
CREB3L2 cAMP responsive element binding protein 3-like 2 0.00981676
RHCG Rh family, C glycoprotein 0.00979041
PAG1 phosphoprotein membrane anchor with glycosphingolipid microdomains 1 0.00962256
DOCK5 dedicator of cytokinesis 5 0.00955993
TOB1 transducer of ERBB2, 1 0.00955638
DUSP4 dual specificity phosphatase 4 0.0095039
ZFP36 ZFP36 ring finger protein 0.00947861

decreased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.209213
ASPH aspartate beta-hydroxylase -0.135149
NAMPT nicotinamide phosphoribosyltransferase -0.134315
CDH11 cadherin 11, type 2, OB-cadherin (osteoblast) -0.129771
EFNA5 ephrin-A5 -0.111208
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.106628
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.104913
PDE4D phosphodiesterase 4D, cAMP-specific -0.101277
TXNRD1 thioredoxin reductase 1 -0.0981219
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0916266
PTMA prothymosin, alpha -0.0871279
SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 -0.0863626
TPT1 tumor protein, translationally-controlled 1 -0.085
TRIO trio Rho guanine nucleotide exchange factor -0.0838562
TM4SF1 transmembrane 4 L six family member 1 -0.0823212
VIM vimentin -0.0815241
TMSB10 thymosin beta 10 -0.0809622
SMYD3 SET and MYND domain containing 3 -0.0774153
PDE10A phosphodiesterase 10A -0.0749182
TFPI2 tissue factor pathway inhibitor 2 -0.0734399
NRCAM neuronal cell adhesion molecule -0.0733351
NALF1 NALCN channel auxiliary factor 1 -0.0705814
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.0703057
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0684951
OGA O-GlcNAcase -0.0607811
RPS24 ribosomal protein S24 -0.0602412
RBM39 RNA binding motif protein 39 -0.0585037
GNAS GNAS complex locus -0.0569591
MYOF myoferlin -0.0524643
PCBP3 poly(rC) binding protein 3 -0.0511239
ACTG1 actin gamma 1 -0.0510988
NAP1L1 nucleosome assembly protein 1-like 1 -0.0507913
TNPO1 transportin 1 -0.0499236
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0498029
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0494194
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0490596
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.048468
RTN4 reticulon 4 -0.0466191
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0464869
BASP1 brain abundant, membrane attached signal protein 1 -0.0454786
CANX calnexin -0.0441955
VCL vinculin -0.0433852
HLA-B major histocompatibility complex, class I, B -0.0422972
RPLP1 ribosomal protein, large, P1 -0.0401586
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0395345
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0388523
RPL34 ribosomal protein L34 -0.0384406
RPL38 ribosomal protein L38 -0.0380046
RPL23 ribosomal protein L23 -0.0377618
SPAG9 sperm associated antigen 9 -0.0377475
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.037453
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0372635
LIMCH1 LIM and calponin homology domains 1 -0.0368672
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0366865
FUS FUS RNA binding protein -0.0366599
SRGN serglycin -0.0352243
PRRC2C proline-rich coiled-coil 2C -0.0345556
NEK7 NIMA-related kinase 7 -0.0344289
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0343724
NFE2L2 nuclear factor, erythroid 2-like 2 -0.0340062
EIF1 eukaryotic translation initiation factor 1 -0.0337818
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0336985
EIF3A eukaryotic translation initiation factor 3, subunit A -0.0336058
ANKRD11 ankyrin repeat domain 11 -0.0335225
DST dystonin -0.0330349
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0326314
IGF1R insulin-like growth factor 1 receptor -0.0324655
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0319397
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0318763
RPL35A ribosomal protein L35a -0.0317457
LUC7L3 LUC7-like 3 (S. cerevisiae) -0.0316052
NF1 neurofibromin 1 -0.031395
NCOA7 nuclear receptor coactivator 7 -0.0312421
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0307598
S100A10 S100 calcium binding protein A10 -0.0307159
BIRC6 baculoviral IAP repeat containing 6 -0.0305427
NIPBL Nipped-B homolog (Drosophila) -0.030487
RRBP1 ribosome binding protein 1 -0.0303803
DHX9 DEAH (Asp-Glu-Ala-His) box helicase 9 -0.0302987
KDM3A lysine (K)-specific demethylase 3A -0.0302071
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0301072
ENAH enabled homolog (Drosophila) -0.0296884
MORF4L2 mortality factor 4 like 2 -0.0296727
FNDC3B fibronectin type III domain containing 3B -0.0294745
PTGR1 prostaglandin reductase 1 -0.0293851
RPS21 ribosomal protein S21 -0.0293581
GOLGA4 golgin A4 -0.0291918
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon -0.0291586
RPH3AL rabphilin 3A-like (without C2 domains) -0.0291133
PBX1 pre-B-cell leukemia homeobox 1 -0.0287825
PUM2 pumilio RNA-binding family member 2 -0.0287417
GRAMD1B GRAM domain containing 1B -0.028678
RPS6 ribosomal protein S6 -0.0284452
TRA2A transformer 2 alpha homolog (Drosophila) -0.0284066
PNISR PNN-interacting serine/arginine-rich protein -0.0282552
AHNAK AHNAK nucleoprotein -0.0282289
ARF1 ADP-ribosylation factor 1 -0.027753
AP2B1 adaptor-related protein complex 2, beta 1 subunit -0.0276155
PGK1 phosphoglycerate kinase 1 -0.0273249
NOP58 NOP58 ribonucleoprotein -0.0269281