Ritonavir_SW 1271 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Ritonavir perturbation in SW 1271 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Ritonavir_SW 1271 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
BIRC3 baculoviral IAP repeat containing 3 0.0685354
TRIO trio Rho guanine nucleotide exchange factor 0.0593006
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.058897
SMAD3 SMAD family member 3 0.0494111
VMP1 vacuole membrane protein 1 0.045067
FTH1 ferritin, heavy polypeptide 1 0.0388909
JMJD1C jumonji domain containing 1C 0.0385223
AKAP12 A kinase (PRKA) anchor protein 12 0.0345662
MACF1 microtubule-actin crosslinking factor 1 0.0344314
ITSN2 intersectin 2 0.0333074
SAMD4A sterile alpha motif domain containing 4A 0.0331453
RIGI RNA sensor RIG-I 0.0313695
NCEH1 neutral cholesterol ester hydrolase 1 0.0286867
ERRFI1 ERBB receptor feedback inhibitor 1 0.0281823
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0272962
IL1RAP interleukin 1 receptor accessory protein 0.027204
CEMIP2 cell migration inducing hyaluronidase 2 0.0265129
ITGB4 integrin, beta 4 0.0264777
NAV2 neuron navigator 2 0.0262613
SET SET nuclear proto-oncogene 0.0258189
ELL2 elongation factor, RNA polymerase II, 2 0.0256715
RAI1 retinoic acid induced 1 0.025323
NKTR natural killer cell triggering receptor 0.0247553
CHD1 chromodomain helicase DNA binding protein 1 0.0247431
EGR1 early growth response 1 0.0247421
AREG amphiregulin 0.0246426
TMEM245 transmembrane protein 245 0.0246022
MSN moesin 0.0245825
SVIL supervillin 0.0238936
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 0.0238087
EXT1 exostosin glycosyltransferase 1 0.0229113
ANXA1 annexin A1 0.022901
BIRC6 baculoviral IAP repeat containing 6 0.0228916
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0228292
PPP4R4 protein phosphatase 4, regulatory subunit 4 0.0223735
DIAPH1 diaphanous-related formin 1 0.0219193
BHLHE40 basic helix-loop-helix family, member e40 0.0218186
NEDD4 neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase 0.0214226
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0207512
ITPRID2 ITPR interacting domain containing 2 0.0206315
SMC5 structural maintenance of chromosomes 5 0.020553
NGLY1 N-glycanase 1 0.0205348
CCNL1 cyclin L1 0.0204709
FAM3C family with sequence similarity 3, member C 0.0200301
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.01999
MYOF myoferlin 0.01982
RSRC2 arginine/serine-rich coiled-coil 2 0.0195154
PRG2 proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein) 0.01948
BAZ1B bromodomain adjacent to zinc finger domain, 1B 0.0191407
RNF19A ring finger protein 19A, RBR E3 ubiquitin protein ligase 0.0191179
MIS18BP1 MIS18 binding protein 1 0.018886
KTN1 kinectin 1 (kinesin receptor) 0.0188039
KMT2E lysine (K)-specific methyltransferase 2E 0.0186184
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0184442
RBMS3 RNA binding motif, single stranded interacting protein 3 0.0184211
NAMPT nicotinamide phosphoribosyltransferase 0.0183336
SIPA1L3 signal-induced proliferation-associated 1 like 3 0.0183136
CAPRIN2 caprin family member 2 0.0182083
PCMTD1 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 0.0181695
MB21D2 Mab-21 domain containing 2 0.0180564
STK24 serine/threonine kinase 24 0.0179677
ZBTB10 zinc finger and BTB domain containing 10 0.0179636
ITGB5 integrin, beta 5 0.0179365
VEGFA vascular endothelial growth factor A 0.0179107
ARHGAP21 Rho GTPase activating protein 21 0.01781
ANO6 anoctamin 6 0.0176346
ITGAV integrin, alpha V 0.0176013
NIPBL Nipped-B homolog (Drosophila) 0.0175433
MAP3K5 mitogen-activated protein kinase kinase kinase 5 0.0174943
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0174703
SLC20A1 solute carrier family 20 (phosphate transporter), member 1 0.0174681
NDRG1 N-myc downstream regulated 1 0.0173989
CCDC88A coiled-coil domain containing 88A 0.0173833
FSD1L fibronectin type III and SPRY domain containing 1-like 0.0171204
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa 0.0170525
PAG1 phosphoprotein membrane anchor with glycosphingolipid microdomains 1 0.0168804
PDE10A phosphodiesterase 10A 0.0168579
RPL36 ribosomal protein L36 0.0166796
SMAD2 SMAD family member 2 0.0166573
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.016537
CAMKMT calmodulin-lysine N-methyltransferase 0.0163789
TMTC2 transmembrane and tetratricopeptide repeat containing 2 0.0162645
EGFR epidermal growth factor receptor 0.0162532
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0161156
DARS1 aspartyl-tRNA synthetase 1 0.0160491
DIP2B DIP2 disco-interacting protein 2 homolog B (Drosophila) 0.0159803
BCAR3 breast cancer anti-estrogen resistance 3 0.0159082
NR1D2 nuclear receptor subfamily 1, group D, member 2 0.0158508
PACS1 phosphofurin acidic cluster sorting protein 1 0.0158036
ATP13A3 ATPase type 13A3 0.0157889
HDAC9 histone deacetylase 9 0.0156031
CYFIP1 cytoplasmic FMR1 interacting protein 1 0.0154215
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 0.0153627
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.015314
KRIT1 KRIT1, ankyrin repeat containing 0.0150681
SHB Src homology 2 domain containing adaptor protein B 0.015063
DGKD diacylglycerol kinase, delta 130kDa 0.0149437
YTHDC1 YTH domain containing 1 0.0148927
CCNT2 cyclin T2 0.0147962
SFSWAP splicing factor, suppressor of white-apricot family 0.0147337

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.382868
VIM vimentin -0.224212
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.140202
TPT1 tumor protein, translationally-controlled 1 -0.0970492
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.070813
TMSB10 thymosin beta 10 -0.0695185
HMGA2 high mobility group AT-hook 2 -0.0560282
GNAS GNAS complex locus -0.0544182
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0526642
IGF2 insulin-like growth factor 2 -0.0515699
MAP1B microtubule-associated protein 1B -0.0507769
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0494165
FUS FUS RNA binding protein -0.047207
ATM ATM serine/threonine kinase -0.0465965
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0445511
INTS6 integrator complex subunit 6 -0.0442678
ANKRD11 ankyrin repeat domain 11 -0.0437949
CD44 CD44 molecule (Indian blood group) -0.0430677
TM4SF1 transmembrane 4 L six family member 1 -0.04187
OSMR oncostatin M receptor -0.0413404
ACTG1 actin gamma 1 -0.0404298
CANX calnexin -0.0392428
PALM2AKAP2 PALM2 and AKAP2 fusion -0.0380809
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0378595
AHNAK AHNAK nucleoprotein -0.0377189
MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2 -0.03758
SMYD3 SET and MYND domain containing 3 -0.0373769
UBC ubiquitin C -0.0350993
H3-3B H3.3 histone B -0.0346702
RALY RALY heterogeneous nuclear ribonucleoprotein -0.0343378
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0340535
RPS13 ribosomal protein S13 -0.0340053
FMN1 formin 1 -0.0338996
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0330281
EEF2 eukaryotic translation elongation factor 2 -0.0310272
DEK DEK proto-oncogene -0.0307795
DPYD dihydropyrimidine dehydrogenase -0.0306931
CELF1 CUGBP, Elav-like family member 1 -0.0303483
CDH4 cadherin 4, type 1, R-cadherin (retinal) -0.0299498
RRBP1 ribosome binding protein 1 -0.0299387
G3BP1 GTPase activating protein (SH3 domain) binding protein 1 -0.0298424
AP2B1 adaptor-related protein complex 2, beta 1 subunit -0.0297086
RBM39 RNA binding motif protein 39 -0.0286338
MED13L mediator complex subunit 13-like -0.028097
ZFAND3 zinc finger, AN1-type domain 3 -0.0280653
RPL26 ribosomal protein L26 -0.027906
PHF3 PHD finger protein 3 -0.0277924
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0277004
SCAPER S-phase cyclin A-associated protein in the ER -0.0275292
PDCD6IP programmed cell death 6 interacting protein -0.0272723
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0272497
S100A10 S100 calcium binding protein A10 -0.0270031
DSCAM Down syndrome cell adhesion molecule -0.0267771
NPC1 Niemann-Pick disease, type C1 -0.0266696
HSPH1 heat shock 105kDa/110kDa protein 1 -0.0265376
LIMS1 LIM and senescent cell antigen-like domains 1 -0.0263215
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) -0.026296
RPS8 ribosomal protein S8 -0.0260485
ENO2 enolase 2 (gamma, neuronal) -0.0259286
CSDE1 cold shock domain containing E1, RNA-binding -0.0257613
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0253775
SDC4 syndecan 4 -0.0252706
HMGA1 high mobility group AT-hook 1 -0.0252546
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0249619
PKM pyruvate kinase, muscle -0.0249157
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0247744
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0246366
AEBP2 AE binding protein 2 -0.0244352
RBMX RNA binding motif protein, X-linked -0.0242531
TBC1D5 TBC1 domain family, member 5 -0.0240607
HNRNPK heterogeneous nuclear ribonucleoprotein K -0.02397
TCF12 transcription factor 12 -0.0239466
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.0239282
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.0238304
UMAD1 UBAP1-MVB12-associated (UMA) domain containing 1 -0.0236937
PHF21A PHD finger protein 21A -0.0236575
PTMA prothymosin, alpha -0.0236567
BZW1 basic leucine zipper and W2 domains 1 -0.0234361
SHANK2 SH3 and multiple ankyrin repeat domains 2 -0.0233346
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0231378
RANBP17 RAN binding protein 17 -0.0231141
GSK3B glycogen synthase kinase 3 beta -0.023082
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0229303
BASP1 brain abundant, membrane attached signal protein 1 -0.0228108
SEPTIN7 septin 7 -0.0225007
RPS27A ribosomal protein S27a -0.0223251
PTPN14 protein tyrosine phosphatase, non-receptor type 14 -0.0222569
CALU calumenin -0.0222151
PYGL phosphorylase, glycogen, liver -0.022152
ZMYND8 zinc finger, MYND-type containing 8 -0.0216975
TRPC4AP transient receptor potential cation channel, subfamily C, member 4 associated protein -0.0215513
BBX bobby sox homolog (Drosophila) -0.0214722
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0214104
WSB1 WD repeat and SOCS box containing 1 -0.0213387
SEPTIN9 septin 9 -0.0211297
ZFAND6 zinc finger, AN1-type domain 6 -0.0209195
ZBTB7A zinc finger and BTB domain containing 7A -0.0208426
PRELID2 PRELI domain containing 2 -0.0207283
ATG7 autophagy related 7 -0.0206869
POTEF POTE ankyrin domain family, member F -0.0206075