Ropivacaine (hydrochloride monohydrate)_NCI-H23 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Ropivacaine (hydrochloride monohydrate) perturbation in NCI-H23 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Ropivacaine (hydrochloride monohydrate)_NCI-H23 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
AKAP12 A kinase (PRKA) anchor protein 12 0.244149
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 0.120185
TMSB10 thymosin beta 10 0.0970144
YBX3 Y box binding protein 3 0.0910351
UBC ubiquitin C 0.0712719
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0603564
FMNL2 formin-like 2 0.058632
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.058169
THSD4 thrombospondin, type I, domain containing 4 0.0575527
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0516975
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like 0.0485845
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 0.0473898
TM4SF1 transmembrane 4 L six family member 1 0.0463247
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0448797
OSMR oncostatin M receptor 0.0441793
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0434368
MT2A metallothionein 2A 0.0433332
AFF3 AF4/FMR2 family, member 3 0.0423055
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0417871
ACTG1 actin gamma 1 0.0411889
IFI6 interferon, alpha-inducible protein 6 0.0398965
PTPRF protein tyrosine phosphatase, receptor type, F 0.039407
ANKRD36 ankyrin repeat domain 36 0.0392821
PRKCE protein kinase C, epsilon 0.0389295
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0371098
WWOX WW domain containing oxidoreductase 0.035396
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0352584
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0349771
RIMS2 regulating synaptic membrane exocytosis 2 0.0338617
DOCK5 dedicator of cytokinesis 5 0.0335471
MCL1 myeloid cell leukemia 1 0.0334902
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0314349
MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2 0.0307752
ERRFI1 ERBB receptor feedback inhibitor 1 0.0306855
RPS3 ribosomal protein S3 0.0306674
SFPQ splicing factor proline/glutamine-rich 0.0306525
ZSWIM6 zinc finger, SWIM-type containing 6 0.0299057
JUN jun proto-oncogene 0.029816
RPS27A ribosomal protein S27a 0.0296608
VMP1 vacuole membrane protein 1 0.0283111
PDE10A phosphodiesterase 10A 0.027855
HMGA2 high mobility group AT-hook 2 0.026702
KLF6 Kruppel-like factor 6 0.0260576
CUX1 cut-like homeobox 1 0.0259181
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae) 0.025238
FOS FBJ murine osteosarcoma viral oncogene homolog 0.0246212
PDE8A phosphodiesterase 8A 0.0243788
CALD1 caldesmon 1 0.0238619
VCL vinculin 0.0231983
ATP11A ATPase, class VI, type 11A 0.0227851
VPS13B vacuolar protein sorting 13 homolog B (yeast) 0.0225834
DPYSL2 dihydropyrimidinase-like 2 0.0225711
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0220979
CHIC2 cysteine-rich hydrophobic domain 2 0.0218365
EXOC6B exocyst complex component 6B 0.021664
LPP LIM domain containing preferred translocation partner in lipoma 0.0215939
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0215377
EML4 echinoderm microtubule associated protein like 4 0.0214906
NR4A3 nuclear receptor subfamily 4, group A, member 3 0.0214251
DIAPH2 diaphanous-related formin 2 0.0209943
GRAMD1B GRAM domain containing 1B 0.0205846
ACTN1 actinin, alpha 1 0.0204948
SPRED2 sprouty-related, EVH1 domain containing 2 0.0204058
STC1 stanniocalcin 1 0.0204024
PPM1L protein phosphatase, Mg2+/Mn2+ dependent, 1L 0.0203651
FNDC3B fibronectin type III domain containing 3B 0.0203131
RABGAP1L RAB GTPase activating protein 1-like 0.0202173
HLA-B major histocompatibility complex, class I, B 0.0200591
TCIM transcriptional and immune response regulator 0.0199557
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0199284
TPM2 tropomyosin 2 (beta) 0.0198549
RAB7A RAB7A, member RAS oncogene family 0.019554
HOMER1 homer scaffolding protein 1 0.01954
FLNA filamin A, alpha 0.0193399
PRELID2 PRELI domain containing 2 0.0192897
LOXL2 lysyl oxidase-like 2 0.0192498
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 0.0192152
NT5E 5'-nucleotidase, ecto (CD73) 0.019187
CDK17 cyclin-dependent kinase 17 0.0191289
TRIM9 tripartite motif containing 9 0.0190093
EXT1 exostosin glycosyltransferase 1 0.0187768
SIK3 SIK family kinase 3 0.0187515
EXOC4 exocyst complex component 4 0.018473
SAMD4A sterile alpha motif domain containing 4A 0.0183806
POTEF POTE ankyrin domain family, member F 0.0182177
PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2 0.0181547
IER3 immediate early response 3 0.017885
DOCK1 dedicator of cytokinesis 1 0.0178103
ETV6 ets variant 6 0.0176386
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0175835
CACNA2D1 calcium channel, voltage-dependent, alpha 2/delta subunit 1 0.0175231
ANKRD36B ankyrin repeat domain 36B 0.0175099
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.0174193
PDE4B phosphodiesterase 4B, cAMP-specific 0.0173584
NR4A2 nuclear receptor subfamily 4, group A, member 2 0.0171979
CTNND1 catenin (cadherin-associated protein), delta 1 0.0171316
SLC9A1 solute carrier family 9, subfamily A (NHE1, cation proton antiporter 1), member 1 0.017007
FAM13A family with sequence similarity 13, member A 0.016887
ANGPTL4 angiopoietin-like 4 0.0168303
PHC2 polyhomeotic homolog 2 (Drosophila) 0.0168263

decreased expression

Symbol Name Standardized Value
TFPI2 tissue factor pathway inhibitor 2 -0.196379
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.117207
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.100103
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0867245
RPL35A ribosomal protein L35a -0.0765489
VIM vimentin -0.0747116
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0726575
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0693596
CSDE1 cold shock domain containing E1, RNA-binding -0.0692213
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0682511
MKI67 marker of proliferation Ki-67 -0.0602037
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 -0.0601582
TXNRD1 thioredoxin reductase 1 -0.057345
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0562268
NCAPD2 non-SMC condensin I complex, subunit D2 -0.0513245
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0500104
RPLP1 ribosomal protein, large, P1 -0.0484044
KPNB1 karyopherin (importin) beta 1 -0.0477774
RPL23 ribosomal protein L23 -0.0475557
NIPBL Nipped-B homolog (Drosophila) -0.0470252
RPS6 ribosomal protein S6 -0.0469597
YBX1 Y box binding protein 1 -0.0468433
RPS8 ribosomal protein S8 -0.0460236
PTMA prothymosin, alpha -0.045898
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0442247
ARID2 AT rich interactive domain 2 (ARID, RFX-like) -0.0426297
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0422964
ATP5F1B ATP synthase F1 subunit beta -0.0421023
SYNE2 spectrin repeat containing, nuclear envelope 2 -0.0416024
EGR1 early growth response 1 -0.04019
RPS27 ribosomal protein S27 -0.0396669
WNK1 WNK lysine deficient protein kinase 1 -0.0392015
GOLGA4 golgin A4 -0.0388867
GOLGB1 golgin B1 -0.0388196
SMC4 structural maintenance of chromosomes 4 -0.0380349
LDHB lactate dehydrogenase B -0.0378326
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0366578
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0366101
PDIA3 protein disulfide isomerase family A, member 3 -0.0362391
ZFR zinc finger RNA binding protein -0.0347841
ACTR2 ARP2 actin-related protein 2 homolog (yeast) -0.0347618
SCAF11 SR-related CTD-associated factor 11 -0.0341604
PKM pyruvate kinase, muscle -0.0340509
RPL3 ribosomal protein L3 -0.032876
PGK1 phosphoglycerate kinase 1 -0.0327873
PIP5K1A phosphatidylinositol-4-phosphate 5-kinase, type I, alpha -0.0325839
PPP2R5E protein phosphatase 2, regulatory subunit B', epsilon isoform -0.0320526
MATR3 matrin 3 -0.0319395
RPS29 ribosomal protein S29 -0.0315563
CBX3 chromobox homolog 3 -0.0314525
PDE4D phosphodiesterase 4D, cAMP-specific -0.0309912
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.030547
LRPPRC leucine-rich pentatricopeptide repeat containing -0.0302847
RPL12 ribosomal protein L12 -0.0302733
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0298023
PRRC2C proline-rich coiled-coil 2C -0.0294532
DLGAP5 discs, large (Drosophila) homolog-associated protein 5 -0.0293884
PHIP pleckstrin homology domain interacting protein -0.029308
RPLP0 ribosomal protein, large, P0 -0.0288969
HP1BP3 heterochromatin protein 1, binding protein 3 -0.0288243
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 -0.0287866
CCT4 chaperonin containing TCP1, subunit 4 (delta) -0.0287049
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0286432
PPFIA1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 -0.0282104
UBE2H ubiquitin-conjugating enzyme E2H -0.0282089
RPL26 ribosomal protein L26 -0.028187
TUBB tubulin, beta class I -0.0280837
CENPF centromere protein F, 350/400kDa -0.0279092
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa -0.0278322
RPL5 ribosomal protein L5 -0.0274648
RPS20 ribosomal protein S20 -0.0273662
EIF3A eukaryotic translation initiation factor 3, subunit A -0.0272055
SF3B2 splicing factor 3b, subunit 2, 145kDa -0.0271675
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0271026
PCBP2 poly(rC) binding protein 2 -0.0267263
R3HDM1 R3H domain containing 1 -0.0264345
TAGLN2 transgelin 2 -0.0264134
H1-0 H1.0 linker histone -0.026283
RPL37 ribosomal protein L37 -0.0261939
EIF1 eukaryotic translation initiation factor 1 -0.0261463
KTN1 kinectin 1 (kinesin receptor) -0.0258788
RPS19 ribosomal protein S19 -0.0255505
RPL38 ribosomal protein L38 -0.0254633
PPP1R12A protein phosphatase 1, regulatory subunit 12A -0.0254544
GATAD2B GATA zinc finger domain containing 2B -0.025384
MIS18BP1 MIS18 binding protein 1 -0.0252069
TPX2 TPX2, microtubule-associated -0.0251178
RPL34 ribosomal protein L34 -0.0249657
EIF4B eukaryotic translation initiation factor 4B -0.0249034
RPLP2 ribosomal protein, large, P2 -0.024774
SF3B1 splicing factor 3b, subunit 1, 155kDa -0.0246279
FBL fibrillarin -0.0242374
RPS23 ribosomal protein S23 -0.0242179
RPL30 ribosomal protein L30 -0.024036
RPL28 ribosomal protein L28 -0.0239958
KIF5B kinesin family member 5B -0.0239765
COG5 component of oligomeric golgi complex 5 -0.0237818
KMT2A lysine (K)-specific methyltransferase 2A -0.0236849
RPS2 ribosomal protein S2 -0.023575
SRP54 signal recognition particle 54kDa -0.0233824