Ropivacaine (hydrochloride monohydrate)_SNU-423 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Ropivacaine (hydrochloride monohydrate) perturbation in SNU-423 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Ropivacaine (hydrochloride monohydrate)_SNU-423 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
IGFN1 immunoglobulin-like and fibronectin type III domain containing 1 0.114515
TRIO trio Rho guanine nucleotide exchange factor 0.110525
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.103079
EEF2 eukaryotic translation elongation factor 2 0.0810507
HDAC9 histone deacetylase 9 0.0768816
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0692363
PDE10A phosphodiesterase 10A 0.0560871
SOD2 superoxide dismutase 2, mitochondrial 0.0501708
FMNL2 formin-like 2 0.0481645
NAP1L1 nucleosome assembly protein 1-like 1 0.0466907
ZMIZ1 zinc finger, MIZ-type containing 1 0.044331
ATXN1 ataxin 1 0.0408594
NAV2 neuron navigator 2 0.0407205
FNIP1 folliculin interacting protein 1 0.0406315
SPDYA speedy/RINGO cell cycle regulator family member A 0.0402332
MLPH melanophilin 0.0400971
INTS6 integrator complex subunit 6 0.0394144
UBC ubiquitin C 0.0389143
MYOF myoferlin 0.0387762
FLNB filamin B, beta 0.0382405
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.038237
APLP2 amyloid beta (A4) precursor-like protein 2 0.0377314
RPS27A ribosomal protein S27a 0.0353709
AFF3 AF4/FMR2 family, member 3 0.0329752
SFPQ splicing factor proline/glutamine-rich 0.0327253
TMEM132D transmembrane protein 132D 0.0321946
PRELID2 PRELI domain containing 2 0.031931
FLNA filamin A, alpha 0.0313958
ASPH aspartate beta-hydroxylase 0.0311362
ZHX2 zinc fingers and homeoboxes 2 0.0311069
GRIN2A glutamate receptor, ionotropic, N-methyl D-aspartate 2A 0.0309873
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0305067
ZSWIM6 zinc finger, SWIM-type containing 6 0.0300954
COL5A1 collagen, type V, alpha 1 0.0300007
EGFR epidermal growth factor receptor 0.0298397
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0298301
BACE2 beta-site APP-cleaving enzyme 2 0.0295585
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0283044
FRMPD4 FERM and PDZ domain containing 4 0.0272672
SDK1 sidekick cell adhesion molecule 1 0.0259846
TBC1D22A TBC1 domain family, member 22A 0.0258949
CEP250 centrosomal protein 250kDa 0.0249841
IQCJ-SCHIP1 IQCJ-SCHIP1 readthrough 0.0246524
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.0240409
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0237744
ENO2 enolase 2 (gamma, neuronal) 0.0237162
CDH13 cadherin 13 0.0236858
MYH9 myosin, heavy chain 9, non-muscle 0.0235833
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0235762
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.0230259
SQSTM1 sequestosome 1 0.0227444
JMJD1C jumonji domain containing 1C 0.0226751
MMP12 matrix metallopeptidase 12 0.0225786
SLC39A11 solute carrier family 39, member 11 0.022138
ABTB3 ankyrin repeat and BTB domain containing 3 0.0220827
DOCK5 dedicator of cytokinesis 5 0.0218421
SPSB1 splA/ryanodine receptor domain and SOCS box containing 1 0.0217377
TRIM25 tripartite motif containing 25 0.0215242
RND3 Rho family GTPase 3 0.0214749
KDM4C lysine (K)-specific demethylase 4C 0.0214419
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 0.0213066
OGA O-GlcNAcase 0.0211211
NOTCH2 notch 2 0.0209914
RPS3 ribosomal protein S3 0.0209009
ADM adrenomedullin 0.0208909
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0208639
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 0.0207995
ANKRD36 ankyrin repeat domain 36 0.0206813
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.0206619
PRKCE protein kinase C, epsilon 0.0206225
DSCAM Down syndrome cell adhesion molecule 0.0202702
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0199161
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0197602
DTNA dystrobrevin, alpha 0.0196925
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0196323
GPC6 glypican 6 0.0195685
DUSP10 dual specificity phosphatase 10 0.0192495
COL8A1 collagen, type VIII, alpha 1 0.0192129
KIRREL1 kirre like nephrin family adhesion molecule 1 0.0191829
ARFGEF3 ARFGEF family member 3 0.0188127
BRD2 bromodomain containing 2 0.0186709
RBMS3 RNA binding motif, single stranded interacting protein 3 0.0185866
ZNF638 zinc finger protein 638 0.0184369
TMEM263 transmembrane protein 263 0.018417
DDX3X DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked 0.0183419
ITPR3 inositol 1,4,5-trisphosphate receptor, type 3 0.0182306
RPS6KA2 ribosomal protein S6 kinase, 90kDa, polypeptide 2 0.0181095
PHC3 polyhomeotic homolog 3 (Drosophila) 0.0181079
FAM219A family with sequence similarity 219, member A 0.018056
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0178069
SLC35F3 solute carrier family 35, member F3 0.0177052
FER fer (fps/fes related) tyrosine kinase 0.0175063
GIGYF2 GRB10 interacting GYF protein 2 0.0173933
PPP1R10 protein phosphatase 1, regulatory subunit 10 0.01739
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0173362
COL7A1 collagen, type VII, alpha 1 0.0172794
RASA3 RAS p21 protein activator 3 0.0172696
CREBRF CREB3 regulatory factor 0.0172529
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0171514
SETX senataxin 0.0171411

decreased expression

Symbol Name Standardized Value
VIM vimentin -0.166546
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.132833
FN1 fibronectin 1 -0.122028
RPS6 ribosomal protein S6 -0.114887
NAMPT nicotinamide phosphoribosyltransferase -0.112168
IGFBP3 insulin-like growth factor binding protein 3 -0.101034
HLA-B major histocompatibility complex, class I, B -0.0961587
FTH1 ferritin, heavy polypeptide 1 -0.0920872
BICC1 BicC family RNA binding protein 1 -0.091526
VCL vinculin -0.0887623
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0840142
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0824473
GLIS3 GLIS family zinc finger 3 -0.0816288
EXT1 exostosin glycosyltransferase 1 -0.0769052
MT2A metallothionein 2A -0.0732019
FTL ferritin, light polypeptide -0.0716071
B2M beta-2-microglobulin -0.0691482
PGK1 phosphoglycerate kinase 1 -0.0686749
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0634369
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0610788
RPL35A ribosomal protein L35a -0.0593982
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0589752
RPLP1 ribosomal protein, large, P1 -0.0563614
ANXA2 annexin A2 -0.0543426
MKI67 marker of proliferation Ki-67 -0.0533721
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0532166
TMSB4X thymosin beta 4, X-linked -0.0531214
CD44 CD44 molecule (Indian blood group) -0.0514093
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0509461
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0496148
TMSB10 thymosin beta 10 -0.049405
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0489258
COL1A2 collagen, type I, alpha 2 -0.0458947
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0456838
EIF1 eukaryotic translation initiation factor 1 -0.0453159
CENPF centromere protein F, 350/400kDa -0.0453051
THBS1 thrombospondin 1 -0.0447897
KPNB1 karyopherin (importin) beta 1 -0.0447842
PTMA prothymosin, alpha -0.0439285
SFTPA2 surfactant protein A2 -0.0438857
EDIL3 EGF-like repeats and discoidin I-like domains 3 -0.0438625
TPM4 tropomyosin 4 -0.0435796
RPL19 ribosomal protein L19 -0.0427695
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.041855
GNAS GNAS complex locus -0.0416234
RPS8 ribosomal protein S8 -0.0406462
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0405604
TUBB tubulin, beta class I -0.04054
RPS19 ribosomal protein S19 -0.0390082
SLC38A1 solute carrier family 38, member 1 -0.0377238
IFITM3 interferon induced transmembrane protein 3 -0.0361093
MAP4 microtubule-associated protein 4 -0.0351717
RPL36A ribosomal protein L36a -0.0344521
HLA-A major histocompatibility complex, class I, A -0.0342848
ACTG1 actin gamma 1 -0.0342561
RPL35 ribosomal protein L35 -0.033571
AKAP12 A kinase (PRKA) anchor protein 12 -0.0333128
VCAN versican -0.033123
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 -0.0331012
BASP1 brain abundant, membrane attached signal protein 1 -0.0326329
TXNIP thioredoxin interacting protein -0.0324961
UGCG UDP-glucose ceramide glucosyltransferase -0.0322653
CDCP1 CUB domain containing protein 1 -0.0319256
EGR1 early growth response 1 -0.031893
S100A9 S100 calcium binding protein A9 -0.0313888
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0313122
RPL12 ribosomal protein L12 -0.0310431
RRBP1 ribosome binding protein 1 -0.0309245
NCOA7 nuclear receptor coactivator 7 -0.030755
KLF6 Kruppel-like factor 6 -0.030639
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0303127
HLA-C major histocompatibility complex, class I, C -0.0301007
ICAM1 intercellular adhesion molecule 1 -0.0298293
RPL34 ribosomal protein L34 -0.0295434
RPLP2 ribosomal protein, large, P2 -0.0295028
RPLP0 ribosomal protein, large, P0 -0.0292746
IER3 immediate early response 3 -0.0292333
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.029222
PHF21A PHD finger protein 21A -0.0286648
PAPPA pregnancy-associated plasma protein A, pappalysin 1 -0.028214
RPL36 ribosomal protein L36 -0.0281015
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II -0.0280954
RPL32 ribosomal protein L32 -0.028085
PALLD palladin, cytoskeletal associated protein -0.0279954
RPS23 ribosomal protein S23 -0.0278927
ANLN anillin, actin binding protein -0.0275098
SRGN serglycin -0.0271321
TNNC1 troponin C type 1 (slow) -0.0270161
KIF4A kinesin family member 4A -0.0269686
TMEM41B transmembrane protein 41B -0.0268328
TXNRD1 thioredoxin reductase 1 -0.0267925
RPS2 ribosomal protein S2 -0.0266377
QKI QKI, KH domain containing, RNA binding -0.0264827
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) -0.0261818
RPL26 ribosomal protein L26 -0.026082
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0260001
RAD21 RAD21 homolog (S. pombe) -0.025861
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0257736
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0257362
RPL8 ribosomal protein L8 -0.025729