Ropivacaine (hydrochloride monohydrate)_SW48 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Ropivacaine (hydrochloride monohydrate) perturbation in SW48 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Ropivacaine (hydrochloride monohydrate)_SW48 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
LAMC2 laminin, gamma 2 0.102285
EMP1 epithelial membrane protein 1 0.0949874
UBC ubiquitin C 0.0917405
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0885935
RPS27A ribosomal protein S27a 0.0808879
EEF2 eukaryotic translation elongation factor 2 0.074416
HMGA2 high mobility group AT-hook 2 0.0599615
AREG amphiregulin 0.0592653
ATXN1 ataxin 1 0.0576952
LMO7 LIM domain 7 0.0569332
DOCK5 dedicator of cytokinesis 5 0.0519361
FHL2 four and a half LIM domains 2 0.0496474
EZR ezrin 0.0490349
PLAUR plasminogen activator, urokinase receptor 0.0415149
SNX9 sorting nexin 9 0.0414234
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0412124
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0411671
ACTG1 actin gamma 1 0.0385411
AHNAK AHNAK nucleoprotein 0.0382485
LRP8 low density lipoprotein receptor-related protein 8, apolipoprotein e receptor 0.0335552
TPM4 tropomyosin 4 0.0326825
NUP50 nucleoporin 50kDa 0.03191
LOC112694756 uncharaterized LOC112694756 0.0301296
PDIA4 protein disulfide isomerase family A, member 4 0.0300692
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 0.0300523
NCEH1 neutral cholesterol ester hydrolase 1 0.0299696
ITPKC inositol-trisphosphate 3-kinase C 0.0293451
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0283488
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.027742
CDCP1 CUB domain containing protein 1 0.0276639
ENO1 enolase 1, (alpha) 0.0275536
ZMYM2 zinc finger, MYM-type 2 0.0272643
SH3RF2 SH3 domain containing ring finger 2 0.0272161
IGSF9B immunoglobulin superfamily, member 9B 0.0269201
SFPQ splicing factor proline/glutamine-rich 0.0268641
SORL1 sortilin-related receptor, L(DLR class) A repeats containing 0.0268145
PDE4B phosphodiesterase 4B, cAMP-specific 0.0267723
LPP LIM domain containing preferred translocation partner in lipoma 0.0265832
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0262293
ARRDC3 arrestin domain containing 3 0.0259472
TSC22D1 TSC22 domain family, member 1 0.0257388
CD44 CD44 molecule (Indian blood group) 0.0256257
ANXA1 annexin A1 0.0255639
SLCO1B3 solute carrier organic anion transporter family, member 1B3 0.0246947
EXOC4 exocyst complex component 4 0.023762
CD36 CD36 molecule (thrombospondin receptor) 0.0237582
NAALADL2 N-acetylated alpha-linked acidic dipeptidase-like 2 0.0235092
BCL2L1 BCL2-like 1 0.02305
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0228618
TGFBR2 transforming growth factor, beta receptor II (70/80kDa) 0.0226634
JUN jun proto-oncogene 0.022397
FAT1 FAT atypical cadherin 1 0.0220877
CTSB cathepsin B 0.022043
SET SET nuclear proto-oncogene 0.0217174
RNF43 ring finger protein 43 0.0216732
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0209402
PCBP2 poly(rC) binding protein 2 0.0208383
MTUS1 microtubule associated tumor suppressor 1 0.0205811
TNRC6B trinucleotide repeat containing 6B 0.0203619
KCNK1 potassium channel, two pore domain subfamily K, member 1 0.0201357
KDM4C lysine (K)-specific demethylase 4C 0.0199437
SPATS2L spermatogenesis associated, serine-rich 2-like 0.0195774
ARHGAP21 Rho GTPase activating protein 21 0.0194611
MACF1 microtubule-actin crosslinking factor 1 0.0193387
RTN4 reticulon 4 0.0193374
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) 0.0192118
PERP PERP, TP53 apoptosis effector 0.0190926
ANKLE2 ankyrin repeat and LEM domain containing 2 0.0187744
ANK3 ankyrin 3, node of Ranvier (ankyrin G) 0.0187564
ASPH aspartate beta-hydroxylase 0.018694
ITGA6 integrin, alpha 6 0.0186837
FBXL17 F-box and leucine-rich repeat protein 17 0.0186352
KDM5C lysine (K)-specific demethylase 5C 0.0186121
XRCC5 X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining) 0.0184521
GIGYF2 GRB10 interacting GYF protein 2 0.0183818
MAN1A1 mannosidase, alpha, class 1A, member 1 0.0183165
PDCD6IP programmed cell death 6 interacting protein 0.0182887
PRKN parkin RBR E3 ubiquitin protein ligase 0.0182739
WRN Werner syndrome, RecQ helicase-like 0.0179249
PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2 0.0177553
FERMT1 fermitin family member 1 0.0177325
PHF14 PHD finger protein 14 0.0176886
HSPA8 heat shock 70kDa protein 8 0.0175229
DUSP6 dual specificity phosphatase 6 0.0174445
CAMK2D calcium/calmodulin-dependent protein kinase II delta 0.0174205
ITPRID2 ITPR interacting domain containing 2 0.0172931
AKAP9 A kinase (PRKA) anchor protein 9 0.0172138
WASHC4 WASH complex subunit 4 0.0170966
ARRDC4 arrestin domain containing 4 0.0167093
UGGT2 UDP-glucose glycoprotein glucosyltransferase 2 0.0166963
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0165834
TRIB1 tribbles pseudokinase 1 0.0163903
SGMS2 sphingomyelin synthase 2 0.0163666
APLP2 amyloid beta (A4) precursor-like protein 2 0.0161596
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.0159847
PPP1R12A protein phosphatase 1, regulatory subunit 12A 0.0159447
WDPCP WD repeat containing planar cell polarity effector 0.0159371
AKAP13 A kinase (PRKA) anchor protein 13 0.0159353
USP6NL USP6 N-terminal like 0.0159345
SPG11 spastic paraplegia 11 (autosomal recessive) 0.0159224

decreased expression

Symbol Name Standardized Value
PTMA prothymosin, alpha -0.162793
RPS6 ribosomal protein S6 -0.158869
RPL35A ribosomal protein L35a -0.114565
EGR1 early growth response 1 -0.0836333
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0618074
RPL34 ribosomal protein L34 -0.0605914
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0516786
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0484114
RPS19 ribosomal protein S19 -0.0464326
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0461255
RPLP1 ribosomal protein, large, P1 -0.0461138
FRAS1 Fraser extracellular matrix complex subunit 1 -0.0447582
RCOR1 REST corepressor 1 -0.0444211
MKI67 marker of proliferation Ki-67 -0.0435712
KRT18 keratin 18, type I -0.0435468
RPS2 ribosomal protein S2 -0.0424283
RPS24 ribosomal protein S24 -0.0418089
PARD3 par-3 family cell polarity regulator -0.0416925
RPLP2 ribosomal protein, large, P2 -0.0415149
HILPDA hypoxia inducible lipid droplet-associated -0.0398744
CENPF centromere protein F, 350/400kDa -0.0396982
IGFBP3 insulin-like growth factor binding protein 3 -0.0396561
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase -0.0391039
RPL11 ribosomal protein L11 -0.0382268
RPS13 ribosomal protein S13 -0.0380802
TPT1 tumor protein, translationally-controlled 1 -0.0373433
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0369494
RPL31 ribosomal protein L31 -0.0369111
LMNA lamin A/C -0.0365167
RPS11 ribosomal protein S11 -0.0365139
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0359863
COG5 component of oligomeric golgi complex 5 -0.0357845
CUX1 cut-like homeobox 1 -0.0352198
SYNE2 spectrin repeat containing, nuclear envelope 2 -0.0350036
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha -0.034272
RPL19 ribosomal protein L19 -0.032653
IARS1 isoleucyl-tRNA synthetase 1 -0.0322263
KPNB1 karyopherin (importin) beta 1 -0.0320858
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0317618
HDAC2 histone deacetylase 2 -0.0312016
FTH1 ferritin, heavy polypeptide 1 -0.0309935
IER3 immediate early response 3 -0.0305721
BRD2 bromodomain containing 2 -0.0300994
SGPP2 sphingosine-1-phosphate phosphatase 2 -0.0297085
PKM pyruvate kinase, muscle -0.0295092
EIF3A eukaryotic translation initiation factor 3, subunit A -0.0284225
RPL32 ribosomal protein L32 -0.0276618
BIRC3 baculoviral IAP repeat containing 3 -0.0275963
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0274034
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0273899
EPRS1 glutamyl-prolyl-tRNA synthetase 1 -0.027131
RPL5 ribosomal protein L5 -0.0269422
RPS8 ribosomal protein S8 -0.0261909
MAP4 microtubule-associated protein 4 -0.0261668
RPS14 ribosomal protein S14 -0.0261457
NCOR1 nuclear receptor corepressor 1 -0.0258395
RPS21 ribosomal protein S21 -0.0254357
RPL36 ribosomal protein L36 -0.0254203
RPL3 ribosomal protein L3 -0.0252212
CDPF1 cysteine-rich, DPF motif domain containing 1 -0.0250506
FOXK1 forkhead box K1 -0.0250193
MATR3 matrin 3 -0.0247261
RPS25 ribosomal protein S25 -0.0243552
RPL27A ribosomal protein L27a -0.024291
PACS1 phosphofurin acidic cluster sorting protein 1 -0.0242259
BAMBI BMP and activin membrane-bound inhibitor -0.0240357
TAS2R14 taste receptor, type 2, member 14 -0.0237106
CBX3 chromobox homolog 3 -0.0236028
GARS1 glycyl-tRNA synthetase 1 -0.0236009
SBF2 SET binding factor 2 -0.023508
FLOT1 flotillin 1 -0.0234306
CLIP2 CAP-GLY domain containing linker protein 2 -0.023269
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 -0.0231917
EIF3E eukaryotic translation initiation factor 3, subunit E -0.0231034
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0230518
ANKRD11 ankyrin repeat domain 11 -0.0229402
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0225683
BPTF bromodomain PHD finger transcription factor -0.0224529
COPB1 coatomer protein complex, subunit beta 1 -0.0223673
PA2G4 proliferation-associated 2G4, 38kDa -0.0222767
RREB1 ras responsive element binding protein 1 -0.0220836
ANK2 ankyrin 2, neuronal -0.0220708
CNOT1 CCR4-NOT transcription complex, subunit 1 -0.0219774
RBM39 RNA binding motif protein 39 -0.021884
TUBB tubulin, beta class I -0.0215643
CDC42BPB CDC42 binding protein kinase beta (DMPK-like) -0.021406
ABR active BCR-related -0.0211595
RPS15 ribosomal protein S15 -0.0211141
SIK3 SIK family kinase 3 -0.0210221
VSNL1 visinin-like 1 -0.0208775
HLA-A major histocompatibility complex, class I, A -0.020389
PFN1 profilin 1 -0.0203667
KRT8 keratin 8, type II -0.0202775
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0200993
GSTP1 glutathione S-transferase pi 1 -0.0200596
MARK3 MAP/microtubule affinity-regulating kinase 3 -0.0198867
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa -0.0197813
YLPM1 YLP motif containing 1 -0.0196384
TRA2A transformer 2 alpha homolog (Drosophila) -0.0194819
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0193264