Rosiglitazone_COLO 205 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Rosiglitazone perturbation in COLO 205 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Rosiglitazone_COLO 205 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PLIN2 perilipin 2 0.208465
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.184065
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.124668
SQSTM1 sequestosome 1 0.107664
MBNL2 muscleblind-like splicing regulator 2 0.0965231
ZMYND8 zinc finger, MYND-type containing 8 0.0857027
ERRFI1 ERBB receptor feedback inhibitor 1 0.0713775
RPS6 ribosomal protein S6 0.0662209
PTMA prothymosin, alpha 0.0627915
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0623356
DENND4C DENN/MADD domain containing 4C 0.0604229
CSTB cystatin B (stefin B) 0.0554445
PDIA3 protein disulfide isomerase family A, member 3 0.0550865
RNF149 ring finger protein 149 0.050512
FNDC3B fibronectin type III domain containing 3B 0.0495668
PTGR1 prostaglandin reductase 1 0.049141
EGLN3 egl-9 family hypoxia-inducible factor 3 0.0489041
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0484139
EIF1 eukaryotic translation initiation factor 1 0.0482405
FTH1 ferritin, heavy polypeptide 1 0.0478218
SPATA13 spermatogenesis associated 13 0.0467947
ENO1 enolase 1, (alpha) 0.0451703
RPL23 ribosomal protein L23 0.0451486
GOLGA4 golgin A4 0.0447735
ABCC3 ATP-binding cassette, sub-family C (CFTR/MRP), member 3 0.0443268
CANX calnexin 0.0425878
B2M beta-2-microglobulin 0.0422197
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0420516
ANXA1 annexin A1 0.0395729
PDK3 pyruvate dehydrogenase kinase, isozyme 3 0.0363055
HMGCS2 3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial) 0.0361183
RPL12 ribosomal protein L12 0.0334566
S100P S100 calcium binding protein P 0.0328179
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide 0.0325365
STYXL2 serine/threonine/tyrosine interacting like 2 0.0305128
ATP2B4 ATPase, Ca++ transporting, plasma membrane 4 0.0304621
HECTD1 HECT domain containing E3 ubiquitin protein ligase 1 0.0301863
MXI1 MAX interactor 1, dimerization protein 0.0298818
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0293916
MT2A metallothionein 2A 0.0291567
ESRP1 epithelial splicing regulatory protein 1 0.029121
FAM13A family with sequence similarity 13, member A 0.0288584
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0285785
NEDD9 neural precursor cell expressed, developmentally down-regulated 9 0.028329
PCK1 phosphoenolpyruvate carboxykinase 1 (soluble) 0.0282603
SAMD4A sterile alpha motif domain containing 4A 0.0282593
B3GNT5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 0.0279609
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0279593
CALR calreticulin 0.027496
RLF rearranged L-myc fusion 0.027277
PDIA6 protein disulfide isomerase family A, member 6 0.027166
RPS8 ribosomal protein S8 0.0263496
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0262225
ACBD3 acyl-CoA binding domain containing 3 0.0261365
RPLP1 ribosomal protein, large, P1 0.0259965
OGA O-GlcNAcase 0.0257457
MCTP2 multiple C2 domains, transmembrane 2 0.0253473
LDHA lactate dehydrogenase A 0.0253104
GOLGA2 golgin A2 0.025024
WDR45B WD repeat domain 45B 0.0249531
RRBP1 ribosome binding protein 1 0.0249422
RPL11 ribosomal protein L11 0.0245774
NAP1L1 nucleosome assembly protein 1-like 1 0.0243935
TTC3 tetratricopeptide repeat domain 3 0.0243576
FTL ferritin, light polypeptide 0.0243002
RAB1A RAB1A, member RAS oncogene family 0.0240337
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0239706
SEC24D SEC24 family member D 0.0239366
SSH2 slingshot protein phosphatase 2 0.023837
GNAS GNAS complex locus 0.0235524
SLC44A1 solute carrier family 44 (choline transporter), member 1 0.0234484
DDIT4 DNA-damage-inducible transcript 4 0.0234139
MYH9 myosin, heavy chain 9, non-muscle 0.0233784
RALGPS2 Ral GEF with PH domain and SH3 binding motif 2 0.023312
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0229674
HILPDA hypoxia inducible lipid droplet-associated 0.0225605
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0225604
RPL37A ribosomal protein L37a 0.022532
PRRC2C proline-rich coiled-coil 2C 0.0224343
COPB1 coatomer protein complex, subunit beta 1 0.0223581
PIK3C2A phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha 0.0223321
ACSL5 acyl-CoA synthetase long-chain family member 5 0.0222891
PNISR PNN-interacting serine/arginine-rich protein 0.0219459
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0218032
TSC22D1 TSC22 domain family, member 1 0.0215248
RPL21 ribosomal protein L21 0.0214564
NUCB2 nucleobindin 2 0.0212234
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0207942
ADM adrenomedullin 0.0207852
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0205224
MYZAP myocardial zonula adherens protein 0.0204423
PGK1 phosphoglycerate kinase 1 0.020386
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0202818
MORF4L2 mortality factor 4 like 2 0.0200923
SPDYA speedy/RINGO cell cycle regulator family member A 0.0200598
LCORL ligand dependent nuclear receptor corepressor-like 0.0198966
RACK1 receptor for activated C kinase 1 0.0197792
RPL26 ribosomal protein L26 0.0197102
CENPF centromere protein F, 350/400kDa 0.0196975
SRRM1 serine/arginine repetitive matrix 1 0.0195859

decreased expression

Symbol Name Standardized Value
NCKAP5 NCK-associated protein 5 -0.134597
EPSTI1 epithelial stromal interaction 1 (breast) -0.107366
C6ORF132 chromosome 6 open reading frame 132 -0.0933732
LMO7 LIM domain 7 -0.0859043
MACC1 metastasis associated in colon cancer 1 -0.0854104
LRCH1 leucine-rich repeats and calponin homology (CH) domain containing 1 -0.0845234
CHST11 carbohydrate (chondroitin 4) sulfotransferase 11 -0.0826437
SPTBN1 spectrin, beta, non-erythrocytic 1 -0.0787521
LCN2 lipocalin 2 -0.077346
ATP11A ATPase, class VI, type 11A -0.077094
MYO1E myosin IE -0.073634
STS steroid sulfatase (microsomal), isozyme S -0.0724332
VCL vinculin -0.0695471
MX2 MX dynamin-like GTPase 2 -0.0691852
RABGAP1L RAB GTPase activating protein 1-like -0.0686429
RNF213 ring finger protein 213 -0.0684376
BTBD9 BTB (POZ) domain containing 9 -0.0681159
TMC5 transmembrane channel-like 5 -0.0679002
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0661042
TJP1 tight junction protein 1 -0.0648532
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 -0.0646607
N4BP2L2 NEDD4 binding protein 2-like 2 -0.0645682
MX1 MX dynamin-like GTPase 1 -0.0623734
TRERF1 transcriptional regulating factor 1 -0.0617506
GCLC glutamate-cysteine ligase, catalytic subunit -0.0616036
RIGI RNA sensor RIG-I -0.0598237
VMP1 vacuole membrane protein 1 -0.0595204
EGR1 early growth response 1 -0.0592849
MAP7 microtubule-associated protein 7 -0.0587271
PERP PERP, TP53 apoptosis effector -0.0572068
LPP LIM domain containing preferred translocation partner in lipoma -0.0567233
SP100 SP100 nuclear antigen -0.0533786
PLSCR1 phospholipid scramblase 1 -0.0530013
PRKCA protein kinase C, alpha -0.0527941
STK24 serine/threonine kinase 24 -0.0510429
ERBIN erbb2 interacting protein -0.0493858
BCL2L1 BCL2-like 1 -0.0478054
SYNE2 spectrin repeat containing, nuclear envelope 2 -0.0474103
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0464301
EFNB2 ephrin-B2 -0.0463105
ANXA2 annexin A2 -0.0459692
BICRAL BICRA like chromatin remodeling complex associated protein -0.0449824
RAB7A RAB7A, member RAS oncogene family -0.0441821
TSHZ2 teashirt zinc finger homeobox 2 -0.0430652
PHF3 PHD finger protein 3 -0.04265
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) -0.0426053
ETV6 ets variant 6 -0.0422584
FMN1 formin 1 -0.0418641
DSCAM Down syndrome cell adhesion molecule -0.0418111
MEIS2 Meis homeobox 2 -0.0416435
SMAD3 SMAD family member 3 -0.0414566
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) -0.0408553
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 -0.0406295
EXT1 exostosin glycosyltransferase 1 -0.0399197
AREG amphiregulin -0.0396557
SIPA1L2 signal-induced proliferation-associated 1 like 2 -0.0395745
PAN3 PAN3 poly(A) specific ribonuclease subunit -0.0393886
KIAA1217 KIAA1217 -0.039239
MAP3K5 mitogen-activated protein kinase kinase kinase 5 -0.0381294
RNF43 ring finger protein 43 -0.0380748
NAALADL2 N-acetylated alpha-linked acidic dipeptidase-like 2 -0.0376173
ADAM10 ADAM metallopeptidase domain 10 -0.0365066
FOXP1 forkhead box P1 -0.0364695
ANKRD10 ankyrin repeat domain 10 -0.0362474
TRIO trio Rho guanine nucleotide exchange factor -0.0362397
SERINC5 serine incorporator 5 -0.0359489
DST dystonin -0.0355253
MACF1 microtubule-actin crosslinking factor 1 -0.0354941
TRIM2 tripartite motif containing 2 -0.0349127
CATSPERB catsper channel auxiliary subunit beta -0.0348753
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0346388
PTBP3 polypyrimidine tract binding protein 3 -0.0342368
CTNND1 catenin (cadherin-associated protein), delta 1 -0.03421
ACTG1 actin gamma 1 -0.0342064
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0340032
SAMD12 sterile alpha motif domain containing 12 -0.0337979
MAP2K6 mitogen-activated protein kinase kinase 6 -0.0336331
HS2ST1 heparan sulfate 2-O-sulfotransferase 1 -0.0335201
FHIT fragile histidine triad -0.0333132
NKD1 naked cuticle homolog 1 (Drosophila) -0.0332784
ZBTB20 zinc finger and BTB domain containing 20 -0.0329546
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0324946
ZSWIM6 zinc finger, SWIM-type containing 6 -0.032446
MCU mitochondrial calcium uniporter -0.0323357
DGKH diacylglycerol kinase, eta -0.0323118
FAT1 FAT atypical cadherin 1 -0.0321734
RALGAPA2 Ral GTPase activating protein, alpha subunit 2 (catalytic) -0.0321668
LYZ lysozyme -0.0318427
DNAJC15 DnaJ (Hsp40) homolog, subfamily C, member 15 -0.0315487
HDAC4 histone deacetylase 4 -0.0315471
MSI2 musashi RNA-binding protein 2 -0.0312489
ELOF1 elongation factor 1 homolog (S. cerevisiae) -0.0312263
EPS8 epidermal growth factor receptor pathway substrate 8 -0.0307344
MAP3K20 mitogen-activated protein kinase kinase kinase 20 -0.0307247
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0305654
AKAP13 A kinase (PRKA) anchor protein 13 -0.0305371
MYO10 myosin X -0.0294697
SHB Src homology 2 domain containing adaptor protein B -0.0294518
SMYD3 SET and MYND domain containing 3 -0.0294048
NCEH1 neutral cholesterol ester hydrolase 1 -0.0292505