Rosiglitazone_NCI-H1573 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Rosiglitazone perturbation in NCI-H1573 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Rosiglitazone_NCI-H1573 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
NAMPT nicotinamide phosphoribosyltransferase 0.0751876
FAM13A family with sequence similarity 13, member A 0.0687271
RNF145 ring finger protein 145 0.0620329
TOP1 topoisomerase (DNA) I 0.0515828
BZW1 basic leucine zipper and W2 domains 1 0.0492208
ATP13A3 ATPase type 13A3 0.0469347
FTH1 ferritin, heavy polypeptide 1 0.0465204
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0406116
TPD52 tumor protein D52 0.0388159
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0388053
FNDC3B fibronectin type III domain containing 3B 0.0385901
KDM6A lysine (K)-specific demethylase 6A 0.0368862
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.036677
HILPDA hypoxia inducible lipid droplet-associated 0.036407
NCKAP1 NCK-associated protein 1 0.0352916
ANXA5 annexin A5 0.0346943
PTPRM protein tyrosine phosphatase, receptor type, M 0.0345741
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0342898
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0338252
AKAP12 A kinase (PRKA) anchor protein 12 0.0302485
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 0.0289521
RICTOR RPTOR independent companion of MTOR, complex 2 0.0281732
HELZ helicase with zinc finger 0.0267518
ENO1 enolase 1, (alpha) 0.0263463
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0253787
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0249196
UBA6 ubiquitin-like modifier activating enzyme 6 0.0248629
PTPRJ protein tyrosine phosphatase, receptor type, J 0.0247419
WAC WW domain containing adaptor with coiled-coil 0.0247303
LMO7 LIM domain 7 0.0246717
USP3 ubiquitin specific peptidase 3 0.0245293
ADAM17 ADAM metallopeptidase domain 17 0.0243168
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 0.0241399
DSPP dentin sialophosphoprotein 0.0239106
MSN moesin 0.023683
RAD21 RAD21 homolog (S. pombe) 0.022844
ITSN2 intersectin 2 0.022826
UVRAG UV radiation resistance associated 0.022788
THSD4 thrombospondin, type I, domain containing 4 0.0218464
NGLY1 N-glycanase 1 0.0215467
KMT2E lysine (K)-specific methyltransferase 2E 0.0214258
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B 0.0212834
ARL8B ADP-ribosylation factor-like 8B 0.0210934
IFNGR2 interferon gamma receptor 2 (interferon gamma transducer 1) 0.0209545
MATR3 matrin 3 0.020862
ARHGAP21 Rho GTPase activating protein 21 0.0208251
RAB27B RAB27B, member RAS oncogene family 0.0199846
ZNF292 zinc finger protein 292 0.0198264
RLF rearranged L-myc fusion 0.0197725
RAD23B RAD23 homolog B (S. cerevisiae) 0.0197002
USP9X ubiquitin specific peptidase 9, X-linked 0.0194821
MBOAT2 membrane bound O-acyltransferase domain containing 2 0.0194164
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0193652
CSDE1 cold shock domain containing E1, RNA-binding 0.0192291
YBX1 Y box binding protein 1 0.018995
NUP58 nucleoporin 58 0.0188773
NPAS2 neuronal PAS domain protein 2 0.018611
FBXL5 F-box and leucine-rich repeat protein 5 0.0182943
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0182275
PDIA6 protein disulfide isomerase family A, member 6 0.0181362
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.018002
SREBF2 sterol regulatory element binding transcription factor 2 0.0179353
ZFR zinc finger RNA binding protein 0.0178766
PPP1CB protein phosphatase 1, catalytic subunit, beta isozyme 0.0178595
RNMT RNA (guanine-7-) methyltransferase 0.0177998
QKI QKI, KH domain containing, RNA binding 0.0177789
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0177255
CAPZA2 capping protein (actin filament) muscle Z-line, alpha 2 0.0171431
GARS1 glycyl-tRNA synthetase 1 0.0170811
MYOF myoferlin 0.0170693
CD109 CD109 molecule 0.0169939
BCAP31 B-cell receptor-associated protein 31 0.0168994
MIER1 mesoderm induction early response 1, transcriptional regulator 0.0166505
EIF4B eukaryotic translation initiation factor 4B 0.0165906
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0165571
CCNY cyclin Y 0.0163922
TFG TRK-fused gene 0.0160823
ECT2 epithelial cell transforming 2 0.0159253
FNBP1L formin binding protein 1-like 0.0158252
TMEM45B transmembrane protein 45B 0.0155663
ZFC3H1 zinc finger, C3H1-type containing 0.0155002
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.0152645
FLNB filamin B, beta 0.0152078
STC1 stanniocalcin 1 0.0148653
RNASE1 ribonuclease, RNase A family, 1 (pancreatic) 0.014663
MIMS1 mitochondrial inner membrane scaffold 1 0.0145459
AMOTL1 angiomotin like 1 0.0144026
MARF1 meiosis regulator and mRNA stability factor 1 0.0143898
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) 0.014243
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0140267
MSMO1 methylsterol monooxygenase 1 0.0139591
SLMAP sarcolemma associated protein 0.0138503
WDR45B WD repeat domain 45B 0.0137868
UBE2O ubiquitin-conjugating enzyme E2O 0.0136941
HNRNPDL heterogeneous nuclear ribonucleoprotein D-like 0.0136598
SPTBN1 spectrin, beta, non-erythrocytic 1 0.013615
AGFG1 ArfGAP with FG repeats 1 0.0136133
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.013486
KDM3A lysine (K)-specific demethylase 3A 0.0134367
CXCL8 chemokine (C-X-C motif) ligand 8 0.0133583

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.349116
EGFR epidermal growth factor receptor -0.19151
NDRG1 N-myc downstream regulated 1 -0.122125
EGR1 early growth response 1 -0.0892039
TMSB10 thymosin beta 10 -0.076983
MCL1 myeloid cell leukemia 1 -0.0701782
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0694539
TMTC2 transmembrane and tetratricopeptide repeat containing 2 -0.0669958
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0584343
LOC112694756 uncharaterized LOC112694756 -0.0554793
INTS6 integrator complex subunit 6 -0.0551667
DOCK5 dedicator of cytokinesis 5 -0.0529517
TXNRD1 thioredoxin reductase 1 -0.0528608
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 -0.0481936
JMJD1C jumonji domain containing 1C -0.0480256
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 -0.0457866
PKM pyruvate kinase, muscle -0.0454109
PATJ PATJ crumbs cell polarity complex component -0.044842
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0447463
GOLGB1 golgin B1 -0.0440262
TBC1D22A TBC1 domain family, member 22A -0.0424815
MT2A metallothionein 2A -0.04244
AGO2 argonaute RISC catalytic component 2 -0.0422049
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0418517
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0407175
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0402787
AKAP9 A kinase (PRKA) anchor protein 9 -0.0402379
MYO1E myosin IE -0.0401658
RPL35A ribosomal protein L35a -0.0399197
NSUN6 NOP2/Sun domain family, member 6 -0.0394975
NABP1 nucleic acid binding protein 1 -0.039092
BLZF1 basic leucine zipper nuclear factor 1 -0.0383083
EFNA5 ephrin-A5 -0.0378387
ZBTB20 zinc finger and BTB domain containing 20 -0.0370606
ANKRD12 ankyrin repeat domain 12 -0.036839
SEC31A SEC31 homolog A (S. cerevisiae) -0.0367374
RAD51B RAD51 paralog B -0.0366058
EXT1 exostosin glycosyltransferase 1 -0.0358128
SLTM SAFB-like, transcription modulator -0.0339229
DSCAM Down syndrome cell adhesion molecule -0.0335985
FZR1 fizzy/cell division cycle 20 related 1 (Drosophila) -0.0335863
ACTG1 actin gamma 1 -0.0332088
CST3 cystatin C -0.0331257
SEC61G Sec61 gamma subunit -0.0327138
PPFIA1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 -0.0327
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0320463
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0318115
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0309377
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0306271
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0302755
IFI6 interferon, alpha-inducible protein 6 -0.0299587
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0299484
RPL37A ribosomal protein L37a -0.028513
VOPP1 vesicular, overexpressed in cancer, prosurvival protein 1 -0.028314
PTPRD protein tyrosine phosphatase, receptor type, D -0.0281789
USP34 ubiquitin specific peptidase 34 -0.0278961
KIAA1217 KIAA1217 -0.0277145
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0277048
HLA-B major histocompatibility complex, class I, B -0.0275852
VMP1 vacuole membrane protein 1 -0.0273474
S100A10 S100 calcium binding protein A10 -0.0268707
RNF213 ring finger protein 213 -0.026781
LRCH3 leucine-rich repeats and calponin homology (CH) domain containing 3 -0.0265393
RPL31 ribosomal protein L31 -0.0263834
HM13 histocompatibility (minor) 13 -0.026334
MKNK2 MAP kinase interacting serine/threonine kinase 2 -0.0258511
RPS12 ribosomal protein S12 -0.0256885
EYA2 EYA transcriptional coactivator and phosphatase 2 -0.0256254
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 -0.0255044
TMCO3 transmembrane and coiled-coil domains 3 -0.0252048
SYAP1 synapse associated protein 1 -0.0251506
B2M beta-2-microglobulin -0.0249882
SLC16A3 solute carrier family 16 (monocarboxylate transporter), member 3 -0.0247573
RALGAPA1 Ral GTPase activating protein, alpha subunit 1 (catalytic) -0.0247314
GPHN gephyrin -0.0247096
RPS29 ribosomal protein S29 -0.0246742
RPS3 ribosomal protein S3 -0.02464
RPS8 ribosomal protein S8 -0.0246025
KDM4C lysine (K)-specific demethylase 4C -0.024573
PRKCA protein kinase C, alpha -0.0242607
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0241461
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0240668
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0239949
OSMR oncostatin M receptor -0.0239312
RPS25 ribosomal protein S25 -0.0236486
FNIP1 folliculin interacting protein 1 -0.0236336
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 -0.0235834
VPS13B vacuolar protein sorting 13 homolog B (yeast) -0.0233713
VCL vinculin -0.0230687
RPLP1 ribosomal protein, large, P1 -0.0228808
TPT1 tumor protein, translationally-controlled 1 -0.0227132
NR4A3 nuclear receptor subfamily 4, group A, member 3 -0.0226765
RPS2 ribosomal protein S2 -0.0225165
RALGAPA2 Ral GTPase activating protein, alpha subunit 2 (catalytic) -0.0225164
SP100 SP100 nuclear antigen -0.022295
CES1 carboxylesterase 1 -0.0222274
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0221451
FAAH2 fatty acid amide hydrolase 2 -0.0220974
NR4A1 nuclear receptor subfamily 4, group A, member 1 -0.0217513
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) -0.0211848