Rucaparib (phosphate)_A549 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Rucaparib (phosphate) perturbation in A549 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Rucaparib (phosphate)_A549 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
AKAP12 A kinase (PRKA) anchor protein 12 0.154637
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.149864
PABPC1 poly(A) binding protein, cytoplasmic 1 0.118067
FTH1 ferritin, heavy polypeptide 1 0.113481
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0953774
ARHGAP26 Rho GTPase activating protein 26 0.0742867
TRIO trio Rho guanine nucleotide exchange factor 0.0734221
SMAD3 SMAD family member 3 0.071536
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.069189
ANXA2 annexin A2 0.0679239
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0619539
SPAG9 sperm associated antigen 9 0.0584415
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0580841
EEF2 eukaryotic translation elongation factor 2 0.0580536
USP3 ubiquitin specific peptidase 3 0.0574719
AHNAK AHNAK nucleoprotein 0.0550832
DGKD diacylglycerol kinase, delta 130kDa 0.0516476
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0504232
NAV2 neuron navigator 2 0.0465347
VEZT vezatin, adherens junctions transmembrane protein 0.0454171
FLNB filamin B, beta 0.0440458
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0435252
NDRG1 N-myc downstream regulated 1 0.042375
FNDC3B fibronectin type III domain containing 3B 0.0421067
UBC ubiquitin C 0.0411231
MYH9 myosin, heavy chain 9, non-muscle 0.0408938
FMNL2 formin-like 2 0.0404951
HELZ helicase with zinc finger 0.0401804
NBAS neuroblastoma amplified sequence 0.0391987
BIRC6 baculoviral IAP repeat containing 6 0.0388637
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0385181
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0382343
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0373876
ANKRD11 ankyrin repeat domain 11 0.0372804
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.0371787
RASA2 RAS p21 protein activator 2 0.0369805
MYOF myoferlin 0.0365818
OGA O-GlcNAcase 0.0361603
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0348756
NAP1L1 nucleosome assembly protein 1-like 1 0.0338997
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0337926
AGFG1 ArfGAP with FG repeats 1 0.0337559
SBF2 SET binding factor 2 0.0335865
PTPRJ protein tyrosine phosphatase, receptor type, J 0.0332365
NAMPT nicotinamide phosphoribosyltransferase 0.0326502
RICTOR RPTOR independent companion of MTOR, complex 2 0.032119
WDR43 WD repeat domain 43 0.0320767
CD44 CD44 molecule (Indian blood group) 0.0320561
NUP58 nucleoporin 58 0.0316312
FLNA filamin A, alpha 0.0312651
RTN4 reticulon 4 0.0311305
OLA1 Obg-like ATPase 1 0.0310053
BHLHE40 basic helix-loop-helix family, member e40 0.0298339
PTBP3 polypyrimidine tract binding protein 3 0.0292584
EIF4A1 eukaryotic translation initiation factor 4A1 0.0290133
AKAP13 A kinase (PRKA) anchor protein 13 0.0286027
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0285666
KDM3A lysine (K)-specific demethylase 3A 0.0284647
PLEC plectin 0.0282629
FAM107B family with sequence similarity 107, member B 0.0282423
UBA2 ubiquitin-like modifier activating enzyme 2 0.0281988
BCL2L1 BCL2-like 1 0.0279114
PTK2 protein tyrosine kinase 2 0.0277083
ARL5B ADP-ribosylation factor-like 5B 0.026374
PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 0.0263295
DENND4A DENN/MADD domain containing 4A 0.0261016
WAC WW domain containing adaptor with coiled-coil 0.0257056
ACTG1 actin gamma 1 0.0257049
TM4SF1 transmembrane 4 L six family member 1 0.0256577
ATP13A3 ATPase type 13A3 0.0254491
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0254301
KCTD9 potassium channel tetramerization domain containing 9 0.0252355
TPD52 tumor protein D52 0.025136
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.025114
POTEF POTE ankyrin domain family, member F 0.0246574
APP amyloid beta (A4) precursor protein 0.0243608
KIRREL3 kin of IRRE like 3 (Drosophila) 0.0241998
ZFAND6 zinc finger, AN1-type domain 6 0.024148
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0241265
ADAM9 ADAM metallopeptidase domain 9 0.0236328
SLC6A6 solute carrier family 6 (neurotransmitter transporter), member 6 0.023606
KLF6 Kruppel-like factor 6 0.0235652
UBA6 ubiquitin-like modifier activating enzyme 6 0.0235494
TNFRSF10D tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain 0.0234815
ECPAS Ecm29 proteasome adaptor and scaffold 0.0234713
SAMD4A sterile alpha motif domain containing 4A 0.0233828
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0233523
RAB8B RAB8B, member RAS oncogene family 0.023197
USP9X ubiquitin specific peptidase 9, X-linked 0.0231532
SETD5 SET domain containing 5 0.0229378
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0229052
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.0228952
RPL28 ribosomal protein L28 0.0227664
PARD3 par-3 family cell polarity regulator 0.0226374
BIRC3 baculoviral IAP repeat containing 3 0.0225799
NEDD4 neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase 0.0225184
MARCHF6 membrane associated ring-CH-type finger 6 0.0223213
DSCAM Down syndrome cell adhesion molecule 0.0222842
EIF4H eukaryotic translation initiation factor 4H 0.0221816
JAK1 Janus kinase 1 0.0219408

decreased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0593415
TMSB10 thymosin beta 10 -0.0542342
EGFR epidermal growth factor receptor -0.0516539
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0491173
RPS19 ribosomal protein S19 -0.0488443
IGFBP3 insulin-like growth factor binding protein 3 -0.0451584
MT2A metallothionein 2A -0.0409155
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0391749
VCL vinculin -0.0354334
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0345147
IFI6 interferon, alpha-inducible protein 6 -0.032132
RPS6 ribosomal protein S6 -0.0315416
RPL35A ribosomal protein L35a -0.0297059
RPS29 ribosomal protein S29 -0.0274278
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0273791
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0273008
RPS23 ribosomal protein S23 -0.0269937
GOLGB1 golgin B1 -0.0249264
PDE4D phosphodiesterase 4D, cAMP-specific -0.0249001
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0239887
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.023808
RPL23 ribosomal protein L23 -0.0232784
ERN1 endoplasmic reticulum to nucleus signaling 1 -0.0220022
RRBP1 ribosome binding protein 1 -0.0218795
PAPPA pregnancy-associated plasma protein A, pappalysin 1 -0.0217925
EIF1 eukaryotic translation initiation factor 1 -0.0212805
IGFBP4 insulin-like growth factor binding protein 4 -0.0212203
RIGI RNA sensor RIG-I -0.0208407
EGR1 early growth response 1 -0.0207236
NRG1 neuregulin 1 -0.0206825
ZBTB20 zinc finger and BTB domain containing 20 -0.0203471
IGFBP1 insulin-like growth factor binding protein 1 -0.0201305
IER3 immediate early response 3 -0.0199824
BASP1 brain abundant, membrane attached signal protein 1 -0.0198944
CXCL5 chemokine (C-X-C motif) ligand 5 -0.0192614
PTMA prothymosin, alpha -0.0191903
KYNU kynureninase -0.0185592
SP100 SP100 nuclear antigen -0.0184552
OSMR oncostatin M receptor -0.0182557
AADAC arylacetamide deacetylase -0.0182073
EFNA5 ephrin-A5 -0.0180627
PDLIM5 PDZ and LIM domain 5 -0.0180584
TPM1 tropomyosin 1 (alpha) -0.0179372
DUSP16 dual specificity phosphatase 16 -0.0169433
INTS6 integrator complex subunit 6 -0.0167413
RPS3 ribosomal protein S3 -0.016613
ST6GAL2 ST6 beta-galactosamide alpha-2,6-sialyltranferase 2 -0.0163773
RPS27 ribosomal protein S27 -0.0161812
MAML3 mastermind-like 3 (Drosophila) -0.0152018
RPS16 ribosomal protein S16 -0.0148317
RPLP2 ribosomal protein, large, P2 -0.0148067
S100A11 S100 calcium binding protein A11 -0.0147587
EXT1 exostosin glycosyltransferase 1 -0.0145862
HDLBP high density lipoprotein binding protein -0.014272
ZMYND8 zinc finger, MYND-type containing 8 -0.0142242
ALCAM activated leukocyte cell adhesion molecule -0.0141753
CCDC88A coiled-coil domain containing 88A -0.0140075
HLA-B major histocompatibility complex, class I, B -0.0139593
RPL34 ribosomal protein L34 -0.013907
RPS11 ribosomal protein S11 -0.0137364
PPIB peptidylprolyl isomerase B (cyclophilin B) -0.0137255
RHCG Rh family, C glycoprotein -0.0136456
LOXL2 lysyl oxidase-like 2 -0.0130562
RPS5 ribosomal protein S5 -0.0128169
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0128137
ZC3H12C zinc finger CCCH-type containing 12C -0.0127404
RPS17 ribosomal protein S17 -0.0125012
RPS10 ribosomal protein S10 -0.012447
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0124423
PDE4B phosphodiesterase 4B, cAMP-specific -0.012411
PDGFA platelet-derived growth factor alpha polypeptide -0.0124033
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0123759
EXOC4 exocyst complex component 4 -0.0123752
RPL38 ribosomal protein L38 -0.012362
IRF2BP2 interferon regulatory factor 2 binding protein 2 -0.0121625
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) -0.0121333
BRAF B-Raf proto-oncogene, serine/threonine kinase -0.0121324
CDK13 cyclin-dependent kinase 13 -0.0121
RPL36A ribosomal protein L36a -0.012058
HMGA2 high mobility group AT-hook 2 -0.0119474
BPTF bromodomain PHD finger transcription factor -0.0118927
RPLP1 ribosomal protein, large, P1 -0.0118652
UGDH UDP-glucose 6-dehydrogenase -0.0118499
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0118105
CLIC4 chloride intracellular channel 4 -0.0117213
GFPT2 glutamine-fructose-6-phosphate transaminase 2 -0.0116538
TBCA tubulin folding cofactor A -0.0113618
CMIP c-Maf inducing protein -0.0112216
RPS25 ribosomal protein S25 -0.0111603
ISG20 interferon stimulated exonuclease gene 20kDa -0.0109603
LMO7 LIM domain 7 -0.0109348
ZFHX3 zinc finger homeobox 3 -0.0108985
RPL12 ribosomal protein L12 -0.0108951
LAMC2 laminin, gamma 2 -0.0105112
HNRNPD heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) -0.0104914
SLCO1B3 solute carrier organic anion transporter family, member 1B3 -0.0104815
ENO2 enolase 2 (gamma, neuronal) -0.0104399
RPL32 ribosomal protein L32 -0.0104247
CP ceruloplasmin (ferroxidase) -0.0104206
SLC25A51 solute carrier family 25, member 51 -0.0103707