Rucaparib (phosphate)_C32 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Rucaparib (phosphate) perturbation in C32 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Rucaparib (phosphate)_C32 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FN1 fibronectin 1 0.177803
NDRG1 N-myc downstream regulated 1 0.0903521
IFRD1 interferon-related developmental regulator 1 0.0635448
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0566666
KMT2E lysine (K)-specific methyltransferase 2E 0.0562727
NUP58 nucleoporin 58 0.0506006
CD109 CD109 molecule 0.050581
NAMPT nicotinamide phosphoribosyltransferase 0.0495323
CDC73 cell division cycle 73 0.0457873
EPS8 epidermal growth factor receptor pathway substrate 8 0.0451042
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0446257
GPC6 glypican 6 0.0445866
NAV2 neuron navigator 2 0.0438174
KMT2C lysine (K)-specific methyltransferase 2C 0.0433088
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0389008
LEF1 lymphoid enhancer-binding factor 1 0.0357262
FNDC3B fibronectin type III domain containing 3B 0.0340936
ZNF292 zinc finger protein 292 0.0328012
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0326994
A2M alpha-2-macroglobulin 0.0314462
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0313521
COPA coatomer protein complex, subunit alpha 0.0302634
NBAS neuroblastoma amplified sequence 0.0302132
MT2A metallothionein 2A 0.0298423
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0296783
MACF1 microtubule-actin crosslinking factor 1 0.0291086
MKLN1 muskelin 1, intracellular mediator containing kelch motifs 0.0290536
PLA2G4A phospholipase A2, group IVA (cytosolic, calcium-dependent) 0.0286734
UBE2H ubiquitin-conjugating enzyme E2H 0.0283065
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0277941
CCNL1 cyclin L1 0.0269661
MRTFA myocardin related transcription factor A 0.0265199
TMEM178B transmembrane protein 178B 0.0260573
RBM33 RNA binding motif protein 33 0.024849
HELZ helicase with zinc finger 0.0247527
LUC7L2 LUC7-like 2 (S. cerevisiae) 0.0243954
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa 0.0243017
AFDN afadin, adherens junction formation factor 0.0242727
ESYT2 extended synaptotagmin-like protein 2 0.0236345
RLF rearranged L-myc fusion 0.0233629
UBA6 ubiquitin-like modifier activating enzyme 6 0.0229182
ICAM1 intercellular adhesion molecule 1 0.0228274
SRPK2 SRSF protein kinase 2 0.0217503
TPD52 tumor protein D52 0.0217032
ANXA2 annexin A2 0.0211227
APP amyloid beta (A4) precursor protein 0.0210762
ATP13A3 ATPase type 13A3 0.021013
TOP2A topoisomerase (DNA) II alpha 170kDa 0.020778
EGLN1 egl-9 family hypoxia-inducible factor 1 0.0207436
SPRED1 sprouty-related, EVH1 domain containing 1 0.0205954
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 0.0205541
TPR translocated promoter region, nuclear basket protein 0.0198581
FOSL1 FOS-like antigen 1 0.0196603
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.019265
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0191918
TNPO3 transportin 3 0.0189974
PUM1 pumilio RNA-binding family member 1 0.0187958
DSCAM Down syndrome cell adhesion molecule 0.0187643
TFRC transferrin receptor 0.0187344
SBF2 SET binding factor 2 0.0186022
BRD2 bromodomain containing 2 0.018483
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0183583
HOOK2 hook microtubule-tethering protein 2 0.0182852
EIF4H eukaryotic translation initiation factor 4H 0.0181882
FLNB filamin B, beta 0.0181824
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0179958
SMAD3 SMAD family member 3 0.0179864
BBX bobby sox homolog (Drosophila) 0.0179567
ZNF638 zinc finger protein 638 0.0177348
FYN FYN proto-oncogene, Src family tyrosine kinase 0.0176992
WDR45B WD repeat domain 45B 0.0176809
ZNF654 zinc finger protein 654 0.017414
MYH9 myosin, heavy chain 9, non-muscle 0.0173186
IGF1R insulin-like growth factor 1 receptor 0.0173182
TANC1 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 0.0171329
EEF2 eukaryotic translation elongation factor 2 0.0170817
FBXO7 F-box protein 7 0.016979
PUM2 pumilio RNA-binding family member 2 0.0169202
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit 0.0168136
ADM adrenomedullin 0.0165902
PTPRG protein tyrosine phosphatase, receptor type, G 0.0163538
NT5C3A 5'-nucleotidase, cytosolic IIIA 0.0161289
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0159537
PLK2 polo-like kinase 2 0.0159437
PNPLA8 patatin-like phospholipase domain containing 8 0.015845
PTPRJ protein tyrosine phosphatase, receptor type, J 0.0157258
PCBP2 poly(rC) binding protein 2 0.0156452
TNNC1 troponin C type 1 (slow) 0.0156337
RGS2 regulator of G-protein signaling 2 0.0155244
SPAG9 sperm associated antigen 9 0.0154266
PDK3 pyruvate dehydrogenase kinase, isozyme 3 0.0153961
KDM6A lysine (K)-specific demethylase 6A 0.0153833
PPME1 protein phosphatase methylesterase 1 0.0151648
MBNL1 muscleblind-like splicing regulator 1 0.0150738
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 0.0150557
XPO1 exportin 1 0.0149497
EIF4A1 eukaryotic translation initiation factor 4A1 0.014925
NEK7 NIMA-related kinase 7 0.0149049
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.0149042
NUMB numb homolog (Drosophila) 0.0148741

decreased expression

Symbol Name Standardized Value
VIM vimentin -0.155785
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0980826
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 -0.0894233
IGFBP5 insulin-like growth factor binding protein 5 -0.083016
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0671251
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0644842
NLGN1 neuroligin 1 -0.0621416
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.061643
S100A6 S100 calcium binding protein A6 -0.0578117
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.054381
IGFBP3 insulin-like growth factor binding protein 3 -0.0528254
TMSB10 thymosin beta 10 -0.0528068
HLA-B major histocompatibility complex, class I, B -0.0438264
VGF VGF nerve growth factor inducible -0.0427041
PTMA prothymosin, alpha -0.0423268
DCT dopachrome tautomerase -0.0417062
TIMP3 TIMP metallopeptidase inhibitor 3 -0.0349804
MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2 -0.0316571
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0313471
RPLP1 ribosomal protein, large, P1 -0.0305939
S100A9 S100 calcium binding protein A9 -0.0300672
IFI16 interferon, gamma-inducible protein 16 -0.0295613
FRMD4A FERM domain containing 4A -0.0283712
IER3 immediate early response 3 -0.0259748
AKAP12 A kinase (PRKA) anchor protein 12 -0.025261
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0244919
ACTG1 actin gamma 1 -0.0241449
FTL ferritin, light polypeptide -0.0236081
PTPRD protein tyrosine phosphatase, receptor type, D -0.0231085
RPS8 ribosomal protein S8 -0.0226654
PCDH7 protocadherin 7 -0.0222926
RPL37A ribosomal protein L37a -0.0220075
OXR1 oxidation resistance 1 -0.0214388
TPT1 tumor protein, translationally-controlled 1 -0.0209054
CTTNBP2 cortactin binding protein 2 -0.019868
RPL35A ribosomal protein L35a -0.0197446
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0195979
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0194178
HLA-A major histocompatibility complex, class I, A -0.019361
ARPC1B actin related protein 2/3 complex, subunit 1B, 41kDa -0.0191565
CD63 CD63 molecule -0.019066
MTDH metadherin -0.0178082
RHOA ras homolog family member A -0.0177525
MARCKS myristoylated alanine-rich protein kinase C substrate -0.017695
HILPDA hypoxia inducible lipid droplet-associated -0.017663
NPC1 Niemann-Pick disease, type C1 -0.0175688
TMTC2 transmembrane and tetratricopeptide repeat containing 2 -0.0175272
PLIN2 perilipin 2 -0.0168726
TMEM158 transmembrane protein 158 (gene/pseudogene) -0.0166157
RPLP2 ribosomal protein, large, P2 -0.0165676
SDC2 syndecan 2 -0.0165464
MMP16 matrix metallopeptidase 16 (membrane-inserted) -0.0163161
RPL34 ribosomal protein L34 -0.0160064
RRBP1 ribosome binding protein 1 -0.0156525
MACROD2 MACRO domain containing 2 -0.0152103
S100A10 S100 calcium binding protein A10 -0.0151763
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) -0.0151613
RPS24 ribosomal protein S24 -0.0150803
SCFD2 sec1 family domain containing 2 -0.0149122
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) -0.0147745
CTSD cathepsin D -0.0143924
EHBP1 EH domain binding protein 1 -0.0143187
RPS12 ribosomal protein S12 -0.014034
ZNF704 zinc finger protein 704 -0.0137626
RPL26 ribosomal protein L26 -0.0135909
FAM162A family with sequence similarity 162, member A -0.0135545
TAGLN2 transgelin 2 -0.0133718
PERP PERP, TP53 apoptosis effector -0.0131467
MAP1B microtubule-associated protein 1B -0.0131291
IFI6 interferon, alpha-inducible protein 6 -0.0130862
EIF1 eukaryotic translation initiation factor 1 -0.0128921
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.012852
RPL23 ribosomal protein L23 -0.0127997
RPS29 ribosomal protein S29 -0.0126343
RPL30 ribosomal protein L30 -0.0125666
GNAS GNAS complex locus -0.0123956
CCND1 cyclin D1 -0.0123578
ITGB8 integrin, beta 8 -0.0123414
RPS15 ribosomal protein S15 -0.0119087
LDHA lactate dehydrogenase A -0.0117597
GDF15 growth differentiation factor 15 -0.0116894
TAS2R14 taste receptor, type 2, member 14 -0.0116133
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0115603
HMGB1 high mobility group box 1 -0.0114
LINGO2 leucine rich repeat and Ig domain containing 2 -0.0113733
MXI1 MAX interactor 1, dimerization protein -0.0113291
RAB2A RAB2A, member RAS oncogene family -0.0113175
RPL12 ribosomal protein L12 -0.0112574
GHR growth hormone receptor -0.0112328
RPL9 ribosomal protein L9 -0.0111521
FBXL7 F-box and leucine-rich repeat protein 7 -0.0110998
BICD1 bicaudal D homolog 1 (Drosophila) -0.0108851
RPL8 ribosomal protein L8 -0.0108779
BACE2 beta-site APP-cleaving enzyme 2 -0.0108304
KTN1 kinectin 1 (kinesin receptor) -0.010784
RPS3 ribosomal protein S3 -0.0107185
CANX calnexin -0.0107054
POM121C POM121 transmembrane nucleoporin C -0.0106314
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 -0.0105585
UQCRB ubiquinol-cytochrome c reductase binding protein -0.0105356