Rucaparib (phosphate)_CFPAC-1 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Rucaparib (phosphate) perturbation in CFPAC-1 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Rucaparib (phosphate)_CFPAC-1 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
NAMPT nicotinamide phosphoribosyltransferase 0.105189
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.099964
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0945075
TMSB4X thymosin beta 4, X-linked 0.0895889
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0858552
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0803514
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0686857
TSC22D2 TSC22 domain family, member 2 0.0618147
AHNAK AHNAK nucleoprotein 0.0557581
ANXA2 annexin A2 0.0547397
MT2A metallothionein 2A 0.0542119
MT1X metallothionein 1X 0.0540946
ELL2 elongation factor, RNA polymerase II, 2 0.0522963
SPAG9 sperm associated antigen 9 0.0514365
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0509702
RBM39 RNA binding motif protein 39 0.0502691
OGA O-GlcNAcase 0.0470388
FAM13A family with sequence similarity 13, member A 0.046046
AKAP12 A kinase (PRKA) anchor protein 12 0.0433696
SMAD3 SMAD family member 3 0.0433463
APP amyloid beta (A4) precursor protein 0.0429127
UBC ubiquitin C 0.0426172
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0424873
KMT2E lysine (K)-specific methyltransferase 2E 0.0396825
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0396131
CD2AP CD2-associated protein 0.0388485
TOP1 topoisomerase (DNA) I 0.0386929
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 0.0386219
CCNL1 cyclin L1 0.0386112
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0384283
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0381811
FTH1 ferritin, heavy polypeptide 1 0.0378336
HLA-A major histocompatibility complex, class I, A 0.0376369
KLF6 Kruppel-like factor 6 0.0374793
MYH9 myosin, heavy chain 9, non-muscle 0.0372521
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0372138
RTN4 reticulon 4 0.035206
ADAM9 ADAM metallopeptidase domain 9 0.0342578
CTNND1 catenin (cadherin-associated protein), delta 1 0.0339678
KDM3A lysine (K)-specific demethylase 3A 0.0334498
PTPN14 protein tyrosine phosphatase, non-receptor type 14 0.0329455
ARRDC3 arrestin domain containing 3 0.0328968
CANX calnexin 0.0326672
FNDC3B fibronectin type III domain containing 3B 0.0326382
NDRG1 N-myc downstream regulated 1 0.0323494
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0318659
HLA-C major histocompatibility complex, class I, C 0.0318614
HPCAL1 hippocalcin-like 1 0.0312922
MYOF myoferlin 0.0309828
HELZ helicase with zinc finger 0.0308125
ABI1 abl-interactor 1 0.0305658
PLAU plasminogen activator, urokinase 0.0304695
PTMA prothymosin, alpha 0.0303921
CXCL8 chemokine (C-X-C motif) ligand 8 0.0296374
LOC112694756 uncharaterized LOC112694756 0.0288093
ZNF292 zinc finger protein 292 0.0285088
RAB1A RAB1A, member RAS oncogene family 0.0281782
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0281529
NUP58 nucleoporin 58 0.0281297
NPEPPS aminopeptidase puromycin sensitive 0.0278905
YTHDC1 YTH domain containing 1 0.0271936
PTTG1IP pituitary tumor-transforming 1 interacting protein 0.0269909
MCTP1 multiple C2 domains, transmembrane 1 0.0269196
HOOK2 hook microtubule-tethering protein 2 0.0263412
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 0.026139
CCNY cyclin Y 0.0260841
CDC73 cell division cycle 73 0.0258384
RLF rearranged L-myc fusion 0.0257561
RAB8B RAB8B, member RAS oncogene family 0.0253666
EREG epiregulin 0.0252891
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B 0.0251587
FXR1 fragile X mental retardation, autosomal homolog 1 0.0250133
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0247715
MARCHF6 membrane associated ring-CH-type finger 6 0.0246026
USP3 ubiquitin specific peptidase 3 0.024573
YBX1 Y box binding protein 1 0.0245115
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0242181
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0238218
ANXA1 annexin A1 0.023807
PJA2 praja ring finger 2, E3 ubiquitin protein ligase 0.023289
DSCAM Down syndrome cell adhesion molecule 0.0232756
NEK7 NIMA-related kinase 7 0.0231629
TFG TRK-fused gene 0.0231024
OSBPL9 oxysterol binding protein-like 9 0.0230104
NPTN neuroplastin 0.0228699
WAC WW domain containing adaptor with coiled-coil 0.0228439
UBE2D3 ubiquitin-conjugating enzyme E2D 3 0.0227546
ACTG1 actin gamma 1 0.0227004
PPP1CB protein phosphatase 1, catalytic subunit, beta isozyme 0.0226878
HLA-E major histocompatibility complex, class I, E 0.022625
PRRC2C proline-rich coiled-coil 2C 0.0225136
TRIO trio Rho guanine nucleotide exchange factor 0.0224512
STRN3 striatin, calmodulin binding protein 3 0.0221984
BTAF1 BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa 0.022127
PDIA4 protein disulfide isomerase family A, member 4 0.0219681
PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 0.0219493
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0219245
ANKRD11 ankyrin repeat domain 11 0.021908
SUCO SUN domain containing ossification factor 0.0218902
UGCG UDP-glucose ceramide glucosyltransferase 0.0217113

decreased expression

Symbol Name Standardized Value
IGFBP3 insulin-like growth factor binding protein 3 -0.122823
IFI27 interferon, alpha-inducible protein 27 -0.0655344
TMSB10 thymosin beta 10 -0.05673
CP ceruloplasmin (ferroxidase) -0.0489325
F3 coagulation factor III (thromboplastin, tissue factor) -0.0480033
MAML2 mastermind-like 2 (Drosophila) -0.0428007
KRT19 keratin 19, type I -0.039606
IFI6 interferon, alpha-inducible protein 6 -0.035027
PKM pyruvate kinase, muscle -0.0345548
LAMA4 laminin, alpha 4 -0.033719
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0326521
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0325073
EGR1 early growth response 1 -0.0314972
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0309654
LAMC2 laminin, gamma 2 -0.0296267
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 -0.0279512
ISG15 ISG15 ubiquitin-like modifier -0.0266832
APOL1 apolipoprotein L, 1 -0.0264306
MMP7 matrix metallopeptidase 7 -0.0264
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0254367
LCN2 lipocalin 2 -0.0243959
HLA-B major histocompatibility complex, class I, B -0.0237502
B2M beta-2-microglobulin -0.0236243
ITGA6 integrin, alpha 6 -0.0231482
RAD51B RAD51 paralog B -0.0228887
NCKAP5 NCK-associated protein 5 -0.0226831
PCDH7 protocadherin 7 -0.0220517
POTEF POTE ankyrin domain family, member F -0.021749
PDE4D phosphodiesterase 4D, cAMP-specific -0.0212679
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0212649
HMGA2 high mobility group AT-hook 2 -0.0209262
EGFR epidermal growth factor receptor -0.0208353
MRPS6 mitochondrial ribosomal protein S6 -0.0204967
TPM4 tropomyosin 4 -0.0200915
HMGA1 high mobility group AT-hook 1 -0.0200222
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0197656
TBC1D22A TBC1 domain family, member 22A -0.0197
CNRIP1 cannabinoid receptor interacting protein 1 -0.0196259
RASAL2 RAS protein activator like 2 -0.0196251
DHRS9 dehydrogenase/reductase (SDR family) member 9 -0.0195933
EFNA5 ephrin-A5 -0.0195342
CDK6 cyclin-dependent kinase 6 -0.0192156
MX2 MX dynamin-like GTPase 2 -0.0191837
S100A11 S100 calcium binding protein A11 -0.0191821
RPS29 ribosomal protein S29 -0.0185079
DTNA dystrobrevin, alpha -0.0184649
S100A6 S100 calcium binding protein A6 -0.0184368
KYNU kynureninase -0.0183247
GRB10 growth factor receptor-bound protein 10 -0.0175746
CEACAM6 carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen) -0.0172687
SACK1A scaffolding CK1 anchoring protein A -0.0172085
PRKCA protein kinase C, alpha -0.0170696
PLAT plasminogen activator, tissue -0.0169814
CATSPERB catsper channel auxiliary subunit beta -0.016891
TAPBP TAP binding protein (tapasin) -0.0167515
RCOR1 REST corepressor 1 -0.015916
RPS19 ribosomal protein S19 -0.0157477
S100A10 S100 calcium binding protein A10 -0.0153682
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 -0.0152505
EXT1 exostosin glycosyltransferase 1 -0.0151013
TCN1 transcobalamin I (vitamin B12 binding protein, R binder family) -0.0146452
CEMIP cell migration inducing protein, hyaluronan binding -0.0145539
IFITM1 interferon induced transmembrane protein 1 -0.0145425
CAMK1D calcium/calmodulin-dependent protein kinase ID -0.014068
SLC6A14 solute carrier family 6 (amino acid transporter), member 14 -0.0140324
HDAC9 histone deacetylase 9 -0.0139453
TMC5 transmembrane channel-like 5 -0.0137715
ARHGEF38 Rho guanine nucleotide exchange factor (GEF) 38 -0.0135392
ZMYND8 zinc finger, MYND-type containing 8 -0.0132129
NRG3 neuregulin 3 -0.0131957
RSAD2 radical S-adenosyl methionine domain containing 2 -0.013188
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 -0.013157
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0131405
IFITM3 interferon induced transmembrane protein 3 -0.0131345
BRIP1 BRCA1 interacting protein C-terminal helicase 1 -0.0130451
SAMD9 sterile alpha motif domain containing 9 -0.0130112
ITGB3 integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61) -0.0129718
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0129614
S100P S100 calcium binding protein P -0.0126903
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0126874
LIMCH1 LIM and calponin homology domains 1 -0.012665
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0125735
ATXN1 ataxin 1 -0.0124459
ENO2 enolase 2 (gamma, neuronal) -0.0123897
GOLGB1 golgin B1 -0.0123742
CMIP c-Maf inducing protein -0.0121818
RANBP17 RAN binding protein 17 -0.0121142
PPDPF pancreatic progenitor cell differentiation and proliferation factor -0.0116092
DNAH11 dynein, axonemal, heavy chain 11 -0.0116023
SLCO4A1 solute carrier organic anion transporter family, member 4A1 -0.0115382
ANXA4 annexin A4 -0.0113998
GLIS3 GLIS family zinc finger 3 -0.0112987
ITGB4 integrin, beta 4 -0.0112318
ST8SIA6 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 -0.0111505
TINAGL1 tubulointerstitial nephritis antigen-like 1 -0.0110248
DST dystonin -0.0110183
MDK midkine (neurite growth-promoting factor 2) -0.0109988
SIPA1L3 signal-induced proliferation-associated 1 like 3 -0.0109251
MAML3 mastermind-like 3 (Drosophila) -0.0109117
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0107259