Rucaparib (phosphate)_HT-29 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Rucaparib (phosphate) perturbation in HT-29 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Rucaparib (phosphate)_HT-29 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FTH1 ferritin, heavy polypeptide 1 0.0871401
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0471685
SAMD12 sterile alpha motif domain containing 12 0.0362448
AHNAK AHNAK nucleoprotein 0.0361061
ANXA2 annexin A2 0.0351102
KMT2C lysine (K)-specific methyltransferase 2C 0.0314916
VEGFA vascular endothelial growth factor A 0.0308056
MAL2 mal, T-cell differentiation protein 2 (gene/pseudogene) 0.030413
DSCAM Down syndrome cell adhesion molecule 0.0299454
SQSTM1 sequestosome 1 0.0290861
CYP3A5 cytochrome P450, family 3, subfamily A, polypeptide 5 0.0288882
SMAD3 SMAD family member 3 0.0280394
FNDC3B fibronectin type III domain containing 3B 0.0279641
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0276291
EXT1 exostosin glycosyltransferase 1 0.0270939
NDRG1 N-myc downstream regulated 1 0.027068
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0267384
MBNL1 muscleblind-like splicing regulator 1 0.025506
GMDS GDP-mannose 4,6-dehydratase 0.0251172
KRT18 keratin 18, type I 0.0251001
MYH14 myosin, heavy chain 14, non-muscle 0.0246493
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 0.024488
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0244639
EPS8 epidermal growth factor receptor pathway substrate 8 0.0244018
PTK2 protein tyrosine kinase 2 0.0241163
KRT8 keratin 8, type II 0.0239633
FAT1 FAT atypical cadherin 1 0.0227807
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0226521
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0217016
TJP1 tight junction protein 1 0.0211642
BIRC6 baculoviral IAP repeat containing 6 0.0200957
KDM6A lysine (K)-specific demethylase 6A 0.0198753
KDM2A lysine (K)-specific demethylase 2A 0.0196486
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0191422
ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 0.0189171
TMEM65 transmembrane protein 65 0.018881
ATXN1 ataxin 1 0.0187738
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0185915
CALU calumenin 0.018386
IFRD1 interferon-related developmental regulator 1 0.0183756
MYO1E myosin IE 0.0183491
SLC45A4 solute carrier family 45, member 4 0.0178207
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 0.0177981
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0173715
NECTIN2 nectin cell adhesion molecule 2 0.0173115
MUC5AC mucin 5AC, oligomeric mucus/gel-forming 0.0168797
PATJ PATJ crumbs cell polarity complex component 0.016794
MYH9 myosin, heavy chain 9, non-muscle 0.0167549
PTPRK protein tyrosine phosphatase, receptor type, K 0.0165068
TRPS1 trichorhinophalangeal syndrome I 0.0163337
BCL2L1 BCL2-like 1 0.0162719
ANXA11 annexin A11 0.0159007
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0158652
CTBP2 C-terminal binding protein 2 0.015716
FNIP1 folliculin interacting protein 1 0.0157152
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0156649
ARHGEF28 Rho guanine nucleotide exchange factor (GEF) 28 0.0156039
PDLIM5 PDZ and LIM domain 5 0.0155215
PEAK1 pseudopodium-enriched atypical kinase 1 0.0154784
PICALM phosphatidylinositol binding clathrin assembly protein 0.0153414
CCSER1 coiled-coil serine-rich protein 1 0.0152869
ARHGAP23 Rho GTPase activating protein 23 0.0152635
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0151207
GSK3B glycogen synthase kinase 3 beta 0.015091
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0150724
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.014682
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 0.0145277
AFF1 AF4/FMR2 family, member 1 0.0143882
CCNL1 cyclin L1 0.0143801
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.0143441
TPM3 tropomyosin 3 0.0142097
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.014103
ERBIN erbb2 interacting protein 0.0140623
AKAP13 A kinase (PRKA) anchor protein 13 0.0140068
KRT20 keratin 20, type I 0.0139405
ARHGAP32 Rho GTPase activating protein 32 0.0136636
EEF2 eukaryotic translation elongation factor 2 0.0135428
MYO5B myosin VB 0.0135244
PKP4 plakophilin 4 0.0134111
ZSWIM6 zinc finger, SWIM-type containing 6 0.013399
FLNB filamin B, beta 0.0133493
NUP98 nucleoporin 98kDa 0.0132493
ARHGAP26 Rho GTPase activating protein 26 0.0132119
MAML3 mastermind-like 3 (Drosophila) 0.013117
LMO7 LIM domain 7 0.0130927
RAB1A RAB1A, member RAS oncogene family 0.0130903
AFDN afadin, adherens junction formation factor 0.013045
SRRM2 serine/arginine repetitive matrix 2 0.0130165
TRAPPC9 trafficking protein particle complex 9 0.0126579
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0125352
IARS1 isoleucyl-tRNA synthetase 1 0.0123942
SND1 staphylococcal nuclease and tudor domain containing 1 0.0123006
VMP1 vacuole membrane protein 1 0.0121464
PSPC1 paraspeckle component 1 0.0121236
PDZD8 PDZ domain containing 8 0.0120866
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) 0.012047
HSPA8 heat shock 70kDa protein 8 0.0120181
SLTM SAFB-like, transcription modulator 0.0119175
EHF ets homologous factor 0.0118441
ZFAND3 zinc finger, AN1-type domain 3 0.0117261

decreased expression

Symbol Name Standardized Value
FTL ferritin, light polypeptide -0.0620387
TPT1 tumor protein, translationally-controlled 1 -0.0578331
RPLP1 ribosomal protein, large, P1 -0.0562615
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0507607
TMSB10 thymosin beta 10 -0.0506719
PTMA prothymosin, alpha -0.0351748
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0304929
RPS24 ribosomal protein S24 -0.0282603
RPS6 ribosomal protein S6 -0.0272172
RPS19 ribosomal protein S19 -0.0247102
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0236299
RPL31 ribosomal protein L31 -0.0228287
RPS5 ribosomal protein S5 -0.0170487
RPL34 ribosomal protein L34 -0.0164368
RPL27A ribosomal protein L27a -0.0161295
RPL23 ribosomal protein L23 -0.0154383
RPS23 ribosomal protein S23 -0.0152066
RPLP0 ribosomal protein, large, P0 -0.014974
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0144742
S100A10 S100 calcium binding protein A10 -0.014183
VIM vimentin -0.0141655
RAD21 RAD21 homolog (S. pombe) -0.0133742
RPL36A ribosomal protein L36a -0.0133634
RPL12 ribosomal protein L12 -0.0133307
RPL9 ribosomal protein L9 -0.0131114
RPS16 ribosomal protein S16 -0.0131103
RPLP2 ribosomal protein, large, P2 -0.0130902
RPS21 ribosomal protein S21 -0.0119135
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0113255
RPS25 ribosomal protein S25 -0.0108953
RPL32 ribosomal protein L32 -0.0108078
RPL19 ribosomal protein L19 -0.0105904
EIF1 eukaryotic translation initiation factor 1 -0.0104341
PGK1 phosphoglycerate kinase 1 -0.0103423
RPS20 ribosomal protein S20 -0.0101436
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0100954
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0099576
RPL8 ribosomal protein L8 -0.00929152
GNAS GNAS complex locus -0.0092441
GCC2 GRIP and coiled-coil domain containing 2 -0.00921359
RPL35A ribosomal protein L35a -0.0090127
AGR2 anterior gradient 2 -0.00896169
PNRC1 proline-rich nuclear receptor coactivator 1 -0.00892501
EEF1D eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) -0.00891966
BTG1 B-cell translocation gene 1, anti-proliferative -0.00868454
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.00861921
RPS4X ribosomal protein S4, X-linked -0.00852099
CCT4 chaperonin containing TCP1, subunit 4 (delta) -0.00851497
UQCRB ubiquinol-cytochrome c reductase binding protein -0.0085045
VDAC1 voltage-dependent anion channel 1 -0.00848996
RPS11 ribosomal protein S11 -0.00825501
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.00817663
HMGB1 high mobility group box 1 -0.00816623
RPL7 ribosomal protein L7 -0.00802446
LYZ lysozyme -0.00793324
SERINC3 serine incorporator 3 -0.00749228
CCNI cyclin I -0.00738355
RPL38 ribosomal protein L38 -0.00732837
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.00715687
CCT6A chaperonin containing TCP1, subunit 6A (zeta 1) -0.00706213
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.00701122
WSB1 WD repeat and SOCS box containing 1 -0.00695956
RPL11 ribosomal protein L11 -0.00690376
UBA52 ubiquitin A-52 residue ribosomal protein fusion product 1 -0.00675266
RPS10 ribosomal protein S10 -0.00669405
UQCRQ ubiquinol-cytochrome c reductase, complex III subunit VII, 9.5kDa -0.00661326
DEK DEK proto-oncogene -0.00661017
HNRNPK heterogeneous nuclear ribonucleoprotein K -0.00659986
MATR3 matrin 3 -0.0065626
NACA nascent polypeptide-associated complex alpha subunit -0.00653664
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 -0.00649258
LMNA lamin A/C -0.00642491
UQCRH ubiquinol-cytochrome c reductase hinge protein -0.0063714
RAB2A RAB2A, member RAS oncogene family -0.00633753
GSTP1 glutathione S-transferase pi 1 -0.00628649
HDLBP high density lipoprotein binding protein -0.00619561
RPL7A ribosomal protein L7a -0.00609767
MT2A metallothionein 2A -0.00609512
WDR45B WD repeat domain 45B -0.0060301
RPS17 ribosomal protein S17 -0.00602419
ATP5F1E ATP synthase F1 subunit epsilon -0.00600502
ATP5MG ATP synthase membrane subunit g -0.00588839
SLC25A5 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 -0.0058845
C11ORF58 chromosome 11 open reading frame 58 -0.00584987
NFE2L2 nuclear factor, erythroid 2-like 2 -0.00583938
IER3 immediate early response 3 -0.00583693
BLTP2 bridge-like lipid transfer protein family member 2 -0.00583436
LOC102724023 ES1 protein homolog, mitochondrial -0.00575872
PSMA7 proteasome (prosome, macropain) subunit, alpha type, 7 -0.00574893
PPIG peptidylprolyl isomerase G (cyclophilin G) -0.00570416
LMAN1 lectin, mannose-binding, 1 -0.00568417
DCAF7 DDB1 and CUL4 associated factor 7 -0.005599
STARD4 StAR-related lipid transfer (START) domain containing 4 -0.0055773
CDC27 cell division cycle 27 -0.00553653
RPL4 ribosomal protein L4 -0.00552155
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.00550947
NPEPPS aminopeptidase puromycin sensitive -0.00546867
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 -0.00539616
FAU Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed -0.005371
ANXA7 annexin A7 -0.00530487