Rucaparib (phosphate)_KATO III Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Rucaparib (phosphate) perturbation in KATO III cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Rucaparib (phosphate)_KATO III drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FGFR2 fibroblast growth factor receptor 2 0.288722
GMDS GDP-mannose 4,6-dehydratase 0.124828
MAML2 mastermind-like 2 (Drosophila) 0.0652374
FTH1 ferritin, heavy polypeptide 1 0.0616074
CEMIP cell migration inducing protein, hyaluronan binding 0.0610147
EHBP1 EH domain binding protein 1 0.0556692
NPSR1 neuropeptide S receptor 1 0.0516031
VEGFA vascular endothelial growth factor A 0.0505675
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0493515
KLHL29 kelch-like family member 29 0.0465139
ARHGAP32 Rho GTPase activating protein 32 0.0458316
PDIA4 protein disulfide isomerase family A, member 4 0.0451793
H1-0 H1.0 linker histone 0.0422707
MBNL2 muscleblind-like splicing regulator 2 0.0397214
GARS1 glycyl-tRNA synthetase 1 0.0392261
CDK6 cyclin-dependent kinase 6 0.0376481
FAT1 FAT atypical cadherin 1 0.0353169
RUNX1 runt-related transcription factor 1 0.0349673
FNDC3B fibronectin type III domain containing 3B 0.034554
LPP LIM domain containing preferred translocation partner in lipoma 0.0343584
KDM3A lysine (K)-specific demethylase 3A 0.0334926
TNIK TRAF2 and NCK interacting kinase 0.0330391
IARS1 isoleucyl-tRNA synthetase 1 0.0314364
ATXN1 ataxin 1 0.0308554
AREG amphiregulin 0.0308003
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0306655
FLNB filamin B, beta 0.0297099
BIRC6 baculoviral IAP repeat containing 6 0.0291689
CANX calnexin 0.0291239
NDRG1 N-myc downstream regulated 1 0.029072
RPS3 ribosomal protein S3 0.0285202
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0278905
KLF5 Kruppel-like factor 5 (intestinal) 0.0271576
AHNAK AHNAK nucleoprotein 0.0271378
ITGA6 integrin, alpha 6 0.026534
RPL35A ribosomal protein L35a 0.0262828
AOPEP aminopeptidase O (putative) 0.0258837
SEC61A1 Sec61 alpha 1 subunit (S. cerevisiae) 0.0258534
AGR2 anterior gradient 2 0.0257064
HERPUD1 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 0.0256065
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0247788
GOLGA4 golgin A4 0.0244882
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 0.0243374
HM13 histocompatibility (minor) 13 0.0243323
ATF7IP2 activating transcription factor 7 interacting protein 2 0.0241602
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0241031
ANXA2 annexin A2 0.023457
RPN1 ribophorin I 0.0233561
RAB1A RAB1A, member RAS oncogene family 0.0227869
HLA-C major histocompatibility complex, class I, C 0.0227629
COG5 component of oligomeric golgi complex 5 0.022753
ARHGAP26 Rho GTPase activating protein 26 0.0222876
PMM2 phosphomannomutase 2 0.0221467
MYH9 myosin, heavy chain 9, non-muscle 0.0219788
GRB10 growth factor receptor-bound protein 10 0.0219753
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0215575
FAM135A family with sequence similarity 135, member A 0.0214854
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0213796
RPL37A ribosomal protein L37a 0.0213382
ANO1 anoctamin 1, calcium activated chloride channel 0.0208887
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.020283
RPS12 ribosomal protein S12 0.0201461
KIF16B kinesin family member 16B 0.0201029
SHROOM3 shroom family member 3 0.0200072
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0198877
ZCCHC7 zinc finger, CCHC domain containing 7 0.0198046
TANC1 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 0.0197754
PCSK5 proprotein convertase subtilisin/kexin type 5 0.0196897
TNKS tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 0.0196772
LAMB3 laminin, beta 3 0.0196572
BTBD9 BTB (POZ) domain containing 9 0.0195489
ANXA1 annexin A1 0.019438
GOLGB1 golgin B1 0.019403
PGK1 phosphoglycerate kinase 1 0.0193671
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 0.019212
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b 0.0191059
CDK13 cyclin-dependent kinase 13 0.0189635
AFDN afadin, adherens junction formation factor 0.0187442
SEC31A SEC31 homolog A (S. cerevisiae) 0.0185745
ERRFI1 ERBB receptor feedback inhibitor 1 0.0184314
PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2 0.0183235
DNAJC1 DnaJ (Hsp40) homolog, subfamily C, member 1 0.0182613
RPL38 ribosomal protein L38 0.0181298
FRMD5 FERM domain containing 5 0.0181261
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0181234
TRPS1 trichorhinophalangeal syndrome I 0.01799
PATJ PATJ crumbs cell polarity complex component 0.017902
WARS1 tryptophanyl-tRNA synthetase 1 0.0178858
SETD5 SET domain containing 5 0.0178758
KDM4C lysine (K)-specific demethylase 4C 0.017643
RAD51B RAD51 paralog B 0.0176206
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 0.0175108
EXOC6B exocyst complex component 6B 0.0174622
KMT2C lysine (K)-specific methyltransferase 2C 0.0172556
SAMD12 sterile alpha motif domain containing 12 0.0171228
CCNY cyclin Y 0.0170465
RPS8 ribosomal protein S8 0.0169427
EIF4A2 eukaryotic translation initiation factor 4A2 0.0168823
PGM3 phosphoglucomutase 3 0.0168645
SND1 staphylococcal nuclease and tudor domain containing 1 0.0167948

decreased expression

Symbol Name Standardized Value
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0975081
TMSB10 thymosin beta 10 -0.0681007
FTL ferritin, light polypeptide -0.0594996
POTEF POTE ankyrin domain family, member F -0.0565268
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0564864
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0422341
IFI27 interferon, alpha-inducible protein 27 -0.0408065
EZR ezrin -0.0371325
LOC102724023 ES1 protein homolog, mitochondrial -0.034014
RPLP1 ribosomal protein, large, P1 -0.0321383
RPL23 ribosomal protein L23 -0.0312863
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0302283
S100A10 S100 calcium binding protein A10 -0.028678
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0281388
S100A6 S100 calcium binding protein A6 -0.0268444
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0261271
PERP PERP, TP53 apoptosis effector -0.0250026
CBX3 chromobox homolog 3 -0.0245903
UBC ubiquitin C -0.0244558
B2M beta-2-microglobulin -0.0240876
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0240706
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0235342
LYZ lysozyme -0.0228166
KRT19 keratin 19, type I -0.0222858
APLP2 amyloid beta (A4) precursor-like protein 2 -0.0219769
CLDN4 claudin 4 -0.021623
PPDPF pancreatic progenitor cell differentiation and proliferation factor -0.021247
TUBA1B tubulin, alpha 1b -0.0198251
GSTP1 glutathione S-transferase pi 1 -0.0195528
LIMA1 LIM domain and actin binding 1 -0.0195209
PCBP2 poly(rC) binding protein 2 -0.0188635
INSIG1 insulin induced gene 1 -0.0181531
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0180678
JUP junction plakoglobin -0.0177947
ST14 suppression of tumorigenicity 14 (colon carcinoma) -0.0175277
TMC5 transmembrane channel-like 5 -0.0171672
DSTN destrin (actin depolymerizing factor) -0.016985
RPS5 ribosomal protein S5 -0.0168589
PRSS3 protease, serine, 3 -0.0165652
ID1 inhibitor of DNA binding 1, dominant negative helix-loop-helix protein -0.0165646
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0158991
RAB11FIP1 RAB11 family interacting protein 1 (class I) -0.0158465
UGCG UDP-glucose ceramide glucosyltransferase -0.0157534
ACTN4 actinin, alpha 4 -0.0153499
LIPH lipase, member H -0.0152975
SKAP2 src kinase associated phosphoprotein 2 -0.0151192
HMGA1 high mobility group AT-hook 1 -0.0148532
IFITM3 interferon induced transmembrane protein 3 -0.0147632
MX2 MX dynamin-like GTPase 2 -0.0147573
MUC1 mucin 1, cell surface associated -0.0146661
CAPZA2 capping protein (actin filament) muscle Z-line, alpha 2 -0.0146556
CYB5R3 cytochrome b5 reductase 3 -0.0142246
FOS FBJ murine osteosarcoma viral oncogene homolog -0.0141722
TNFRSF21 tumor necrosis factor receptor superfamily, member 21 -0.0139619
RPS24 ribosomal protein S24 -0.0136171
CDK2AP2 cyclin-dependent kinase 2 associated protein 2 -0.0132342
CTNND1 catenin (cadherin-associated protein), delta 1 -0.0131532
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0130211
WIPF2 WAS/WASL interacting protein family, member 2 -0.0127238
LOC112694756 uncharaterized LOC112694756 -0.012656
SP100 SP100 nuclear antigen -0.0126098
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0124057
CLDN7 claudin 7 -0.0122678
MUC17 mucin 17, cell surface associated -0.0122126
TPX2 TPX2, microtubule-associated -0.0121793
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) -0.0121715
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 -0.0120496
NPEPPS aminopeptidase puromycin sensitive -0.0120415
GNB2 guanine nucleotide binding protein (G protein), beta polypeptide 2 -0.0119575
ADAM9 ADAM metallopeptidase domain 9 -0.0118345
PTGES3 prostaglandin E synthase 3 (cytosolic) -0.0117462
CALM3 calmodulin 3 (phosphorylase kinase, delta) -0.0116197
ACBD3 acyl-CoA binding domain containing 3 -0.0115998
RPS4X ribosomal protein S4, X-linked -0.0114332
UQCRQ ubiquinol-cytochrome c reductase, complex III subunit VII, 9.5kDa -0.0113177
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0112379
CEACAM6 carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen) -0.0111846
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0111654
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 -0.0111586
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) -0.0109159
ANKRD12 ankyrin repeat domain 12 -0.0108439
NIBAN2 niban apoptosis regulator 2 -0.0108197
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0107825
TPI1 triosephosphate isomerase 1 -0.0105563
TXNRD1 thioredoxin reductase 1 -0.0105532
ITM2B integral membrane protein 2B -0.0104721
RPL19 ribosomal protein L19 -0.0104585
NDUFA4 NDUFA4, mitochondrial complex associated -0.0104245
STK24 serine/threonine kinase 24 -0.0104231
SERINC3 serine incorporator 3 -0.0103594
FDFT1 farnesyl-diphosphate farnesyltransferase 1 -0.0103307
IFITM1 interferon induced transmembrane protein 1 -0.0102974
TM4SF1 transmembrane 4 L six family member 1 -0.0100877
HMGN2 high mobility group nucleosomal binding domain 2 -0.0100728
HNRNPR heterogeneous nuclear ribonucleoprotein R -0.00995858
AGR3 anterior gradient 3 -0.00989679
KTN1 kinectin 1 (kinesin receptor) -0.00980153
LCN2 lipocalin 2 -0.0097639
LPIN1 lipin 1 -0.0097064
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) -0.00969541