Rucaparib (phosphate)_LOX-IMVI Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Rucaparib (phosphate) perturbation in LOX-IMVI cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Rucaparib (phosphate)_LOX-IMVI drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
AKAP12 A kinase (PRKA) anchor protein 12 0.182935
AHNAK AHNAK nucleoprotein 0.121933
TRIO trio Rho guanine nucleotide exchange factor 0.0968007
FN1 fibronectin 1 0.0851834
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.0734977
CD109 CD109 molecule 0.0705229
EEF2 eukaryotic translation elongation factor 2 0.0683114
ELL2 elongation factor, RNA polymerase II, 2 0.0646706
ANXA2 annexin A2 0.0637166
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0603929
LSAMP limbic system-associated membrane protein 0.0577151
CD44 CD44 molecule (Indian blood group) 0.0546629
FNDC3B fibronectin type III domain containing 3B 0.0486145
CTSB cathepsin B 0.0485575
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0469332
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0465078
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0446486
FTH1 ferritin, heavy polypeptide 1 0.0435747
HIPK2 homeodomain interacting protein kinase 2 0.042237
PTK2 protein tyrosine kinase 2 0.0410321
HMGA2 high mobility group AT-hook 2 0.0407474
PTCHD4 patched domain containing 4 0.0399621
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0390475
RUNX1 runt-related transcription factor 1 0.0384869
NAV1 neuron navigator 1 0.0384758
PDE4D phosphodiesterase 4D, cAMP-specific 0.0381206
LPP LIM domain containing preferred translocation partner in lipoma 0.0380911
ATP13A3 ATPase type 13A3 0.0361866
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 0.0338316
SPAG9 sperm associated antigen 9 0.0324351
FLNA filamin A, alpha 0.0321415
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0321392
CXCL8 chemokine (C-X-C motif) ligand 8 0.0315409
ZNF292 zinc finger protein 292 0.0314073
UGCG UDP-glucose ceramide glucosyltransferase 0.0313218
OGT O-linked N-acetylglucosamine (GlcNAc) transferase 0.0307185
NDRG1 N-myc downstream regulated 1 0.0304037
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0293156
NTM neurotrimin 0.0290799
IGFBP3 insulin-like growth factor binding protein 3 0.0287353
H1-0 H1.0 linker histone 0.0280174
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0277244
INHBA inhibin, beta A 0.0274037
CANX calnexin 0.0271316
NUP58 nucleoporin 58 0.026885
MYH9 myosin, heavy chain 9, non-muscle 0.0262129
GLIPR1 GLI pathogenesis-related 1 0.026083
KLF6 Kruppel-like factor 6 0.0260607
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0259686
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0259362
MYO10 myosin X 0.0255832
HELZ helicase with zinc finger 0.0255542
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0255407
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0253853
USP3 ubiquitin specific peptidase 3 0.0250276
CORO1C coronin, actin binding protein, 1C 0.0245903
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0244178
NAMPT nicotinamide phosphoribosyltransferase 0.0235067
CHST11 carbohydrate (chondroitin 4) sulfotransferase 11 0.0234929
RAB1A RAB1A, member RAS oncogene family 0.0234523
COL6A2 collagen, type VI, alpha 2 0.0233284
RNF213 ring finger protein 213 0.0230662
FLNC filamin C, gamma 0.0227076
NALF1 NALCN channel auxiliary factor 1 0.0225355
UBC ubiquitin C 0.0225116
MCL1 myeloid cell leukemia 1 0.0222404
RPL35A ribosomal protein L35a 0.0221971
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0221338
GPC6 glypican 6 0.0220963
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0220492
RPLP0 ribosomal protein, large, P0 0.0220152
SMAD3 SMAD family member 3 0.0219918
DST dystonin 0.0219855
ZNF217 zinc finger protein 217 0.0214086
CCL20 chemokine (C-C motif) ligand 20 0.0213362
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0205238
MXI1 MAX interactor 1, dimerization protein 0.020362
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like 0.0202087
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.02017
ENO1 enolase 1, (alpha) 0.0201284
FGFR1 fibroblast growth factor receptor 1 0.0201161
HILPDA hypoxia inducible lipid droplet-associated 0.0195751
MICAL2 microtubule associated monooxygenase, calponin and LIM domain containing 2 0.0193089
EPB41L2 erythrocyte membrane protein band 4.1-like 2 0.0192631
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0191523
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0190268
QKI QKI, KH domain containing, RNA binding 0.0189246
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0187527
SBF2 SET binding factor 2 0.018552
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.0184806
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 0.0182814
TPT1 tumor protein, translationally-controlled 1 0.0182751
JUN jun proto-oncogene 0.0181228
LOC112694756 uncharaterized LOC112694756 0.018003
VEGFA vascular endothelial growth factor A 0.0179817
TEX14 testis expressed 14 0.0177825
CAV1 caveolin 1, caveolae protein, 22kDa 0.0175605
PLEC plectin 0.0173198
EGR1 early growth response 1 0.0172703
CLIC1 chloride intracellular channel 1 0.0172507

decreased expression

Symbol Name Standardized Value
FTL ferritin, light polypeptide -0.051775
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0498199
EIF1 eukaryotic translation initiation factor 1 -0.0489316
RPS6 ribosomal protein S6 -0.0486956
RPS2 ribosomal protein S2 -0.0434749
USP34 ubiquitin specific peptidase 34 -0.0413352
KTN1 kinectin 1 (kinesin receptor) -0.0372017
CALD1 caldesmon 1 -0.0370938
ASPH aspartate beta-hydroxylase -0.034016
LDHA lactate dehydrogenase A -0.0335699
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) -0.0329913
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0327742
VIM vimentin -0.0325876
LUC7L3 LUC7-like 3 (S. cerevisiae) -0.0321088
LIMA1 LIM domain and actin binding 1 -0.0301058
BRD2 bromodomain containing 2 -0.0292695
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0274377
ENKUR enkurin, TRPC channel interacting protein -0.026584
SAMD3 sterile alpha motif domain containing 3 -0.0262616
PLEKHA5 pleckstrin homology domain containing, family A member 5 -0.0261316
RPL7 ribosomal protein L7 -0.0249635
MARCHF4 membrane associated ring-CH-type finger 4 -0.0246768
EXT1 exostosin glycosyltransferase 1 -0.0241232
ACTR2 ARP2 actin-related protein 2 homolog (yeast) -0.0241229
MAP3K20 mitogen-activated protein kinase kinase kinase 20 -0.0240138
RB1CC1 RB1-inducible coiled-coil 1 -0.0237012
SIPA1L1 signal-induced proliferation-associated 1 like 1 -0.0234235
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0232017
PRRC2C proline-rich coiled-coil 2C -0.023191
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0228805
TLE4 transducin-like enhancer of split 4 -0.0227162
SCAF11 SR-related CTD-associated factor 11 -0.0221475
RPL32 ribosomal protein L32 -0.0210076
SDCCAG8 serologically defined colon cancer antigen 8 -0.0204464
HMGA1 high mobility group AT-hook 1 -0.0203332
ZFC3H1 zinc finger, C3H1-type containing -0.0202054
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 -0.0198671
ZNF638 zinc finger protein 638 -0.0197478
NRIP1 nuclear receptor interacting protein 1 -0.0196761
SLC38A2 solute carrier family 38, member 2 -0.0192571
MSN moesin -0.019237
BMAL2 basic helix-loop-helix ARNT like 2 -0.0189315
ANK3 ankyrin 3, node of Ranvier (ankyrin G) -0.0184675
PRKG1 protein kinase, cGMP-dependent, type I -0.0183245
RPL21 ribosomal protein L21 -0.0181415
RPS23 ribosomal protein S23 -0.0179887
SEPTIN10 septin 10 -0.0179697
SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 -0.0178818
WWC2 WW and C2 domain containing 2 -0.0178323
RPLP1 ribosomal protein, large, P1 -0.0175976
ITSN1 intersectin 1 (SH3 domain protein) -0.0175159
JMJD1C jumonji domain containing 1C -0.0173856
DPYD dihydropyrimidine dehydrogenase -0.0168933
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0168413
MINDY2 MINDY lysine 48 deubiquitinase 2 -0.0162213
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0160464
RPL26 ribosomal protein L26 -0.016027
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0159733
PPP1R12A protein phosphatase 1, regulatory subunit 12A -0.0156775
SRSF11 serine/arginine-rich splicing factor 11 -0.0156663
ANO6 anoctamin 6 -0.0156589
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0155041
RPL36A ribosomal protein L36a -0.0154836
ACTG1 actin gamma 1 -0.0154382
DSCAM Down syndrome cell adhesion molecule -0.0151873
PBX3 pre-B-cell leukemia homeobox 3 -0.0150114
DOCK4 dedicator of cytokinesis 4 -0.0149261
EIF5B eukaryotic translation initiation factor 5B -0.0147932
TXNRD1 thioredoxin reductase 1 -0.0147476
RND3 Rho family GTPase 3 -0.0146417
TMF1 TATA element modulatory factor 1 -0.0145797
UBXN4 UBX domain protein 4 -0.0144759
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0144273
OSBPL8 oxysterol binding protein-like 8 -0.0143647
PAX3 paired box 3 -0.0142407
EEA1 early endosome antigen 1 -0.0140254
PPFIA1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 -0.0140124
CD163L1 CD163 molecule-like 1 -0.0139294
AKAP9 A kinase (PRKA) anchor protein 9 -0.013822
SLC20A2 solute carrier family 20 (phosphate transporter), member 2 -0.0138201
BTG1 B-cell translocation gene 1, anti-proliferative -0.0138069
CAVIN1 caveolae associated protein 1 -0.0137912
RPL17-C18ORF32 RPL17-C18orf32 readthrough -0.01376
PPP2R3A protein phosphatase 2, regulatory subunit B'', alpha -0.0136851
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0136772
CCDC91 coiled-coil domain containing 91 -0.0136704
PHF14 PHD finger protein 14 -0.0135717
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0134675
ZEB1 zinc finger E-box binding homeobox 1 -0.013453
RBM25 RNA binding motif protein 25 -0.0133848
PTPRD protein tyrosine phosphatase, receptor type, D -0.013377
ANTXR2 anthrax toxin receptor 2 -0.013361
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 -0.0132861
GAN gigaxonin -0.0132771
ZBTB44 zinc finger and BTB domain containing 44 -0.0131564
MT2A metallothionein 2A -0.0130335
MAGI3 membrane associated guanylate kinase, WW and PDZ domain containing 3 -0.0130103
SMAP1 small ArfGAP 1 -0.0129816
TAS2R14 taste receptor, type 2, member 14 -0.0129501
GOLGA4 golgin A4 -0.012853