Rucaparib (phosphate)_LS 180 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Rucaparib (phosphate) perturbation in LS 180 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Rucaparib (phosphate)_LS 180 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FAT1 FAT atypical cadherin 1 0.0973205
MUC6 mucin 6, oligomeric mucus/gel-forming 0.0882031
FTH1 ferritin, heavy polypeptide 1 0.0729768
CEMIP cell migration inducing protein, hyaluronan binding 0.0644564
NDRG1 N-myc downstream regulated 1 0.0592227
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0565178
VEGFA vascular endothelial growth factor A 0.0558005
TNS4 tensin 4 0.05447
ANXA2 annexin A2 0.0462871
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0460921
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0419584
FLNB filamin B, beta 0.0413329
FAM13A family with sequence similarity 13, member A 0.0401285
ITGA6 integrin, alpha 6 0.0396236
MUC5AC mucin 5AC, oligomeric mucus/gel-forming 0.0393762
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b 0.0377943
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0377149
DSCAM Down syndrome cell adhesion molecule 0.036448
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.036431
ZNF292 zinc finger protein 292 0.0359507
EEF2 eukaryotic translation elongation factor 2 0.0357543
AHNAK AHNAK nucleoprotein 0.0343536
TXNIP thioredoxin interacting protein 0.0338573
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0337079
DSPP dentin sialophosphoprotein 0.0334379
LPP LIM domain containing preferred translocation partner in lipoma 0.0330085
PDIA4 protein disulfide isomerase family A, member 4 0.0312711
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0304403
KRT8 keratin 8, type II 0.0296964
ASPH aspartate beta-hydroxylase 0.0296597
UBA6 ubiquitin-like modifier activating enzyme 6 0.0295039
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0292214
MACF1 microtubule-actin crosslinking factor 1 0.0287906
MED13L mediator complex subunit 13-like 0.0276
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0272049
PRELID2 PRELI domain containing 2 0.0259245
SRRM2 serine/arginine repetitive matrix 2 0.025417
FNDC3B fibronectin type III domain containing 3B 0.0251876
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0250097
ABHD2 abhydrolase domain containing 2 0.0249989
CALB1 calbindin 1, 28kDa 0.0248856
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0241971
KMT2E lysine (K)-specific methyltransferase 2E 0.0241565
PPARG peroxisome proliferator-activated receptor gamma 0.0240906
EREG epiregulin 0.02366
TMSB4X thymosin beta 4, X-linked 0.023079
ARHGAP26 Rho GTPase activating protein 26 0.0230363
ARHGAP32 Rho GTPase activating protein 32 0.0227611
TPM3 tropomyosin 3 0.0222033
RREB1 ras responsive element binding protein 1 0.0221315
CD46 CD46 molecule, complement regulatory protein 0.021873
PTBP3 polypyrimidine tract binding protein 3 0.0214163
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0211573
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0209246
UBE2H ubiquitin-conjugating enzyme E2H 0.0209145
PTEN phosphatase and tensin homolog 0.0207818
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0207512
CALR calreticulin 0.0206397
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0201943
ENO1 enolase 1, (alpha) 0.0201328
BIRC6 baculoviral IAP repeat containing 6 0.0200892
AREG amphiregulin 0.0200343
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.0196458
NALF1 NALCN channel auxiliary factor 1 0.0194495
GOLGA4 golgin A4 0.0193301
EHF ets homologous factor 0.0192745
GMDS GDP-mannose 4,6-dehydratase 0.0192635
ITPRID2 ITPR interacting domain containing 2 0.0191462
PSD3 pleckstrin and Sec7 domain containing 3 0.0188703
ATXN1 ataxin 1 0.0188646
MYH9 myosin, heavy chain 9, non-muscle 0.0187838
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0187207
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0185746
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0184915
ESYT2 extended synaptotagmin-like protein 2 0.0182937
EPS8 epidermal growth factor receptor pathway substrate 8 0.018041
SBF2 SET binding factor 2 0.0179544
FBXW7 F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase 0.0176768
SETD5 SET domain containing 5 0.0176592
WAC WW domain containing adaptor with coiled-coil 0.0176399
PARD3 par-3 family cell polarity regulator 0.017627
CCNY cyclin Y 0.0176046
RPS12 ribosomal protein S12 0.0175808
CDH17 cadherin 17, LI cadherin (liver-intestine) 0.0173877
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 0.0173189
TIPARP TCDD-inducible poly(ADP-ribose) polymerase 0.0172519
PDIA3 protein disulfide isomerase family A, member 3 0.0172492
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.017117
GSK3B glycogen synthase kinase 3 beta 0.017014
EPHA2 EPH receptor A2 0.0169771
KDM7A lysine (K)-specific demethylase 7A 0.0168845
IBTK inhibitor of Bruton agammaglobulinemia tyrosine kinase 0.0167664
PLAUR plasminogen activator, urokinase receptor 0.0166634
SHROOM3 shroom family member 3 0.0166341
RALGPS2 Ral GEF with PH domain and SH3 binding motif 2 0.016582
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0165418
LMO7 LIM domain 7 0.0165263
MYO5B myosin VB 0.0162479
LRCH1 leucine-rich repeats and calponin homology (CH) domain containing 1 0.0161811
TCF7L2 transcription factor 7-like 2 (T-cell specific, HMG-box) 0.0161452

decreased expression

Symbol Name Standardized Value
TMSB10 thymosin beta 10 -0.0912988
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0513711
PTMA prothymosin, alpha -0.0471786
RPLP1 ribosomal protein, large, P1 -0.0350684
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0345716
TPT1 tumor protein, translationally-controlled 1 -0.0318622
FTL ferritin, light polypeptide -0.0298165
RPS24 ribosomal protein S24 -0.0193718
EIF1 eukaryotic translation initiation factor 1 -0.0171612
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0156938
RPL32 ribosomal protein L32 -0.0152212
GDF15 growth differentiation factor 15 -0.0149999
LOC102724023 ES1 protein homolog, mitochondrial -0.0147899
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.014569
S100A10 S100 calcium binding protein A10 -0.0129666
AGR2 anterior gradient 2 -0.0127644
RPL31 ribosomal protein L31 -0.0124213
NPR2 natriuretic peptide receptor 2 -0.011721
LDHA lactate dehydrogenase A -0.0111485
CCND1 cyclin D1 -0.0108889
BTG1 B-cell translocation gene 1, anti-proliferative -0.0107636
IER3 immediate early response 3 -0.0107576
PNRC1 proline-rich nuclear receptor coactivator 1 -0.00968535
RPL4 ribosomal protein L4 -0.0096309
RPL34 ribosomal protein L34 -0.00956716
RPS20 ribosomal protein S20 -0.00956051
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.00953023
RPS5 ribosomal protein S5 -0.00945877
ARF1 ADP-ribosylation factor 1 -0.00920762
RPL27A ribosomal protein L27a -0.0090882
VDAC1 voltage-dependent anion channel 1 -0.00890923
GNAS GNAS complex locus -0.00864959
HNRNPAB heterogeneous nuclear ribonucleoprotein A/B -0.00864391
RPL36A ribosomal protein L36a -0.00856828
RPL14 ribosomal protein L14 -0.00856093
GADD45A growth arrest and DNA-damage-inducible, alpha -0.00848117
ST13 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) -0.00836606
RPS16 ribosomal protein S16 -0.00834077
RPL8 ribosomal protein L8 -0.00808717
S100A9 S100 calcium binding protein A9 -0.00799197
POF1B premature ovarian failure, 1B -0.00791577
RPS21 ribosomal protein S21 -0.00786059
LMNA lamin A/C -0.00775749
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.00773445
HMGB1 high mobility group box 1 -0.00770875
ISG15 ISG15 ubiquitin-like modifier -0.00770684
MYL12B myosin, light chain 12B, regulatory -0.00770576
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.00746407
RESF1 retroelement silencing factor 1 -0.00737915
RPL36AL ribosomal protein L36a-like -0.00717808
RPS19 ribosomal protein S19 -0.00686455
S100P S100 calcium binding protein P -0.00686266
RPS25 ribosomal protein S25 -0.00684605
NRN1 neuritin 1 -0.00680036
EEF1D eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) -0.00671427
RPLP0 ribosomal protein, large, P0 -0.00665541
BTN3A3 butyrophilin, subfamily 3, member A3 -0.00664536
UBE2I ubiquitin-conjugating enzyme E2I -0.00659394
KLK10 kallikrein-related peptidase 10 -0.00650118
RRBP1 ribosome binding protein 1 -0.00646112
SOX4 SRY (sex determining region Y)-box 4 -0.00639108
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.00635457
EGR1 early growth response 1 -0.00628878
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.00623361
PARK7 parkinson protein 7 -0.00615445
TUBB tubulin, beta class I -0.00609409
ASTN2 astrotactin 2 -0.00605252
CHCHD2 coiled-coil-helix-coiled-coil-helix domain containing 2 -0.00595371
CBX3 chromobox homolog 3 -0.00594225
NACA nascent polypeptide-associated complex alpha subunit -0.00588328
MYO1E myosin IE -0.0058657
RPL39 ribosomal protein L39 -0.00584433
RPL11 ribosomal protein L11 -0.00573596
CCT4 chaperonin containing TCP1, subunit 4 (delta) -0.00570395
LYZ lysozyme -0.00569331
TFF3 trefoil factor 3 (intestinal) -0.00567692
IRF2BP2 interferon regulatory factor 2 binding protein 2 -0.00567547
CCT8 chaperonin containing TCP1, subunit 8 (theta) -0.0056742
UBA52 ubiquitin A-52 residue ribosomal protein fusion product 1 -0.00566542
NPSR1 neuropeptide S receptor 1 -0.00566234
RPLP2 ribosomal protein, large, P2 -0.00555007
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 -0.00554705
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.00553132
CST3 cystatin C -0.00548209
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.00542045
S100A6 S100 calcium binding protein A6 -0.00539043
CA9 carbonic anhydrase IX -0.00538868
RPL37 ribosomal protein L37 -0.00537581
MARCHF3 membrane associated ring-CH-type finger 3 -0.00534877
RPS6 ribosomal protein S6 -0.0053379
PERP PERP, TP53 apoptosis effector -0.00525087
RPS23 ribosomal protein S23 -0.00522513
SERF2 small EDRK-rich factor 2 -0.00522241
GNL3 guanine nucleotide binding protein-like 3 (nucleolar) -0.00521289
VCL vinculin -0.00517945
UQCRQ ubiquinol-cytochrome c reductase, complex III subunit VII, 9.5kDa -0.00516368
ALDOC aldolase C, fructose-bisphosphate -0.00516137
ASB4 ankyrin repeat and SOCS box containing 4 -0.00506408
BZW1 basic leucine zipper and W2 domains 1 -0.00500308
PTPRK protein tyrosine phosphatase, receptor type, K -0.00498518