Rucaparib (phosphate)_MIA PaCa-2 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Rucaparib (phosphate) perturbation in MIA PaCa-2 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Rucaparib (phosphate)_MIA PaCa-2 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.116573
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.102918
ERRFI1 ERBB receptor feedback inhibitor 1 0.101121
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.101057
TMSB4X thymosin beta 4, X-linked 0.0948506
TXNRD1 thioredoxin reductase 1 0.0948419
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0844145
AHNAK AHNAK nucleoprotein 0.0756408
RAI1 retinoic acid induced 1 0.074124
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0718192
EEF2 eukaryotic translation elongation factor 2 0.0715811
VIM vimentin 0.069223
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0630136
TM4SF1 transmembrane 4 L six family member 1 0.0570381
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 0.0547846
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0536659
CENPF centromere protein F, 350/400kDa 0.0533822
ACTG1 actin gamma 1 0.0524635
RTN4 reticulon 4 0.0514943
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0504317
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0503369
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0469475
SPAG9 sperm associated antigen 9 0.0459488
LOC112694756 uncharaterized LOC112694756 0.044886
MACF1 microtubule-actin crosslinking factor 1 0.0447466
CANX calnexin 0.043605
TRIP12 thyroid hormone receptor interactor 12 0.0432925
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0429146
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0421532
GARS1 glycyl-tRNA synthetase 1 0.0421085
EREG epiregulin 0.0412882
MT2A metallothionein 2A 0.0410211
MKI67 marker of proliferation Ki-67 0.0404482
KLF6 Kruppel-like factor 6 0.0382268
FTH1 ferritin, heavy polypeptide 1 0.0377307
MAP1LC3B microtubule-associated protein 1 light chain 3 beta 0.0368252
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 0.0367307
BCAR3 breast cancer anti-estrogen resistance 3 0.0361089
APP amyloid beta (A4) precursor protein 0.0357978
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 0.0356529
TMEM41B transmembrane protein 41B 0.034455
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0340104
NAMPT nicotinamide phosphoribosyltransferase 0.0338303
SMC4 structural maintenance of chromosomes 4 0.033578
SLC38A2 solute carrier family 38, member 2 0.0335068
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 0.0330452
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0330224
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0326149
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0315648
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0314551
EZR ezrin 0.0310096
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0307158
SRGN serglycin 0.0306669
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0306138
ANLN anillin, actin binding protein 0.0305911
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0300872
KMT2E lysine (K)-specific methyltransferase 2E 0.0300768
ANXA1 annexin A1 0.0296865
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0296318
AP2B1 adaptor-related protein complex 2, beta 1 subunit 0.0295701
PHLDB2 pleckstrin homology-like domain, family B, member 2 0.0294896
CKAP5 cytoskeleton associated protein 5 0.0288792
JMJD1C jumonji domain containing 1C 0.0287781
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0287065
SRRM2 serine/arginine repetitive matrix 2 0.0283494
YBX1 Y box binding protein 1 0.0278528
CSDE1 cold shock domain containing E1, RNA-binding 0.0276808
PGK1 phosphoglycerate kinase 1 0.0275766
KPNA4 karyopherin alpha 4 (importin alpha 3) 0.0274899
MYH9 myosin, heavy chain 9, non-muscle 0.0272663
TOP1 topoisomerase (DNA) I 0.0270849
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0269254
ZNF292 zinc finger protein 292 0.0266396
FXR1 fragile X mental retardation, autosomal homolog 1 0.026472
CEP170 centrosomal protein 170kDa 0.0260751
ZEB1 zinc finger E-box binding homeobox 1 0.0260278
SET SET nuclear proto-oncogene 0.0259202
ARRDC3 arrestin domain containing 3 0.0259087
SEPTIN7 septin 7 0.0257288
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein 0.0255632
HOOK2 hook microtubule-tethering protein 2 0.0254533
GCNT2 glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group) 0.025403
MT1X metallothionein 1X 0.0252664
ADAM17 ADAM metallopeptidase domain 17 0.0251735
YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta 0.0251481
EMP1 epithelial membrane protein 1 0.0250825
SRPK2 SRSF protein kinase 2 0.0250472
YBX3 Y box binding protein 3 0.024954
ACTR2 ARP2 actin-related protein 2 homolog (yeast) 0.0248751
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0247911
TNFRSF10D tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain 0.024495
ZFAND3 zinc finger, AN1-type domain 3 0.0244318
OGA O-GlcNAcase 0.0239752
CSNK1A1 casein kinase 1, alpha 1 0.0239637
PRRC2C proline-rich coiled-coil 2C 0.023784
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0237639
BZW1 basic leucine zipper and W2 domains 1 0.0236103
KMT2C lysine (K)-specific methyltransferase 2C 0.0234276
KIF5B kinesin family member 5B 0.0233449
USP34 ubiquitin specific peptidase 34 0.0231811

decreased expression

Symbol Name Standardized Value
TP63 tumor protein p63 -0.11672
HLA-B major histocompatibility complex, class I, B -0.0728786
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0651749
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0650333
TMSB10 thymosin beta 10 -0.0622135
CADM2 cell adhesion molecule 2 -0.0560158
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 -0.0458096
ZDHHC14 zinc finger, DHHC-type containing 14 -0.0445797
TNS3 tensin 3 -0.03751
RPL35A ribosomal protein L35a -0.0374738
RPL31 ribosomal protein L31 -0.0373846
FTL ferritin, light polypeptide -0.037235
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 -0.0370902
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0367355
EFNA5 ephrin-A5 -0.0360146
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0348859
TPT1 tumor protein, translationally-controlled 1 -0.0308554
RPS6 ribosomal protein S6 -0.0306515
SP100 SP100 nuclear antigen -0.0302819
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0280769
RPL37A ribosomal protein L37a -0.0277547
WARS1 tryptophanyl-tRNA synthetase 1 -0.0271176
IFIH1 interferon induced with helicase C domain 1 -0.027013
ENO2 enolase 2 (gamma, neuronal) -0.0265374
CSMD3 CUB and Sushi multiple domains 3 -0.0262645
RPL36A ribosomal protein L36a -0.0254349
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0250963
EPHA4 EPH receptor A4 -0.0248695
RPLP1 ribosomal protein, large, P1 -0.0244971
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.023569
RNF213 ring finger protein 213 -0.0229314
RIGI RNA sensor RIG-I -0.0229237
RPL37 ribosomal protein L37 -0.0225749
RPS29 ribosomal protein S29 -0.0224432
IFI6 interferon, alpha-inducible protein 6 -0.022359
RPS23 ribosomal protein S23 -0.0223362
DPYD dihydropyrimidine dehydrogenase -0.021422
RPS19 ribosomal protein S19 -0.0213154
PSD3 pleckstrin and Sec7 domain containing 3 -0.0211062
RPS24 ribosomal protein S24 -0.0208855
TIMP2 TIMP metallopeptidase inhibitor 2 -0.0204838
RPL36 ribosomal protein L36 -0.0203685
RPS10 ribosomal protein S10 -0.0202663
DNER delta/notch-like EGF repeat containing -0.019999
B2M beta-2-microglobulin -0.0196985
PRELID2 PRELI domain containing 2 -0.0196362
EGR1 early growth response 1 -0.0194297
SDK1 sidekick cell adhesion molecule 1 -0.0192098
TSC22D1 TSC22 domain family, member 1 -0.0185658
ISG15 ISG15 ubiquitin-like modifier -0.018493
NR2F1 nuclear receptor subfamily 2, group F, member 1 -0.0184095
ESYT2 extended synaptotagmin-like protein 2 -0.0184046
DLG1 discs, large homolog 1 (Drosophila) -0.0183784
RPS25 ribosomal protein S25 -0.018102
DST dystonin -0.0179813
LOC102724023 ES1 protein homolog, mitochondrial -0.0179298
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 -0.017796
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0176091
IFITM1 interferon induced transmembrane protein 1 -0.0174708
INTS6 integrator complex subunit 6 -0.0171115
DPH6 diphthamine biosynthesis 6 -0.0170573
RPS12 ribosomal protein S12 -0.0166651
HMGA1 high mobility group AT-hook 1 -0.0165972
WSB1 WD repeat and SOCS box containing 1 -0.0164733
RPLP2 ribosomal protein, large, P2 -0.0163722
HLA-A major histocompatibility complex, class I, A -0.0163015
PLOD1 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1 -0.0159231
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 -0.0152308
RPS27 ribosomal protein S27 -0.0148802
TGM2 transglutaminase 2 -0.0148204
RPS17 ribosomal protein S17 -0.0140514
PLSCR1 phospholipid scramblase 1 -0.0135555
CFAP299 cilia and flagella associated protein 299 -0.0133533
TNFAIP2 tumor necrosis factor, alpha-induced protein 2 -0.0130402
RPL34 ribosomal protein L34 -0.0130325
TRIM56 tripartite motif containing 56 -0.0130072
RPS13 ribosomal protein S13 -0.0128973
RPL38 ribosomal protein L38 -0.0128236
ZBTB20 zinc finger and BTB domain containing 20 -0.0127953
IFITM3 interferon induced transmembrane protein 3 -0.0125671
PMP22 peripheral myelin protein 22 -0.0125445
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha -0.0124994
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0123811
COL5A2 collagen, type V, alpha 2 -0.0122731
TPRG1 tumor protein p63 regulated 1 -0.012119
ANKRD26 ankyrin repeat domain 26 -0.0119635
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0117991
HSPG2 heparan sulfate proteoglycan 2 -0.0116169
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 -0.011566
EPB41 erythrocyte membrane protein band 4.1 -0.0114318
EHBP1 EH domain binding protein 1 -0.0113638
AEBP2 AE binding protein 2 -0.0113457
GNGT1 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1 -0.0112097
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like -0.0111731
PLIN2 perilipin 2 -0.0111664
TRIM5 tripartite motif containing 5 -0.0109534
RAD51B RAD51 paralog B -0.010921
RPS3 ribosomal protein S3 -0.0108078
MEF2A myocyte enhancer factor 2A -0.0108046
SMAD9 SMAD family member 9 -0.0107251