Rucaparib (phosphate)_NCI-H1573 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Rucaparib (phosphate) perturbation in NCI-H1573 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Rucaparib (phosphate)_NCI-H1573 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FTH1 ferritin, heavy polypeptide 1 0.0924149
PDE4D phosphodiesterase 4D, cAMP-specific 0.0872061
CAV1 caveolin 1, caveolae protein, 22kDa 0.0837909
THSD4 thrombospondin, type I, domain containing 4 0.0755036
PTPRM protein tyrosine phosphatase, receptor type, M 0.0693179
FAM13A family with sequence similarity 13, member A 0.067575
MT2A metallothionein 2A 0.0619331
RNF145 ring finger protein 145 0.0556642
GCLC glutamate-cysteine ligase, catalytic subunit 0.0555553
SHANK2 SH3 and multiple ankyrin repeat domains 2 0.0524472
BIRC3 baculoviral IAP repeat containing 3 0.0496852
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0481702
ANXA2 annexin A2 0.0468675
AKAP13 A kinase (PRKA) anchor protein 13 0.046598
NAMPT nicotinamide phosphoribosyltransferase 0.0446963
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.0440679
AHNAK AHNAK nucleoprotein 0.0412368
TOP1 topoisomerase (DNA) I 0.0407087
AKAP12 A kinase (PRKA) anchor protein 12 0.0404706
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.0389836
H1-0 H1.0 linker histone 0.0389693
LMO7 LIM domain 7 0.0386749
CES1 carboxylesterase 1 0.0359946
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0359817
AP1S3 adaptor-related protein complex 1, sigma 3 subunit 0.0324538
MACF1 microtubule-actin crosslinking factor 1 0.0312547
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0305295
DNER delta/notch-like EGF repeat containing 0.0302227
ATP1A4 ATPase, Na+/K+ transporting, alpha 4 polypeptide 0.0299578
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.0293121
B3GNT5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 0.0292045
ESYT2 extended synaptotagmin-like protein 2 0.0290836
SCEL sciellin 0.0289504
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0284646
MAP2K1 mitogen-activated protein kinase kinase 1 0.027925
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.0278912
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 0.0273071
WASF2 WAS protein family, member 2 0.02666
ATP13A3 ATPase type 13A3 0.0258878
SMAD3 SMAD family member 3 0.0247018
LHFPL2 lipoma HMGIC fusion partner-like 2 0.0241304
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0240267
ANXA1 annexin A1 0.0239297
ERRFI1 ERBB receptor feedback inhibitor 1 0.0231707
SOD2 superoxide dismutase 2, mitochondrial 0.0225846
FRY furry homolog (Drosophila) 0.0225799
TPD52 tumor protein D52 0.0224817
UBE2E2 ubiquitin-conjugating enzyme E2E 2 0.0219952
DSPP dentin sialophosphoprotein 0.0218239
FNDC3A fibronectin type III domain containing 3A 0.0215106
YAP1 Yes-associated protein 1 0.0213037
MT1X metallothionein 1X 0.0210659
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0210646
HELZ helicase with zinc finger 0.0208766
PLEC plectin 0.0205405
SBF2 SET binding factor 2 0.0203651
KCMF1 potassium channel modulatory factor 1 0.020153
MCL1 myeloid cell leukemia 1 0.0200803
ACTG1 actin gamma 1 0.0200355
LAMB3 laminin, beta 3 0.0196324
DYNC2I1 dynein 2 intermediate chain 1 0.0195655
PTPRJ protein tyrosine phosphatase, receptor type, J 0.0193
MCTP1 multiple C2 domains, transmembrane 1 0.0188139
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) 0.0186669
POTEF POTE ankyrin domain family, member F 0.0184007
TMEM165 transmembrane protein 165 0.0183078
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 0.0181308
RREB1 ras responsive element binding protein 1 0.0180236
NCKAP1 NCK-associated protein 1 0.0175452
RAB7A RAB7A, member RAS oncogene family 0.0174582
LGR4 leucine-rich repeat containing G protein-coupled receptor 4 0.0174433
FLNB filamin B, beta 0.0169267
BAIAP2L1 BAI1-associated protein 2-like 1 0.0164267
NCOA3 nuclear receptor coactivator 3 0.0160838
EFNA5 ephrin-A5 0.0158271
PER1 period circadian clock 1 0.0157506
STRN3 striatin, calmodulin binding protein 3 0.0154944
SCNN1G sodium channel, non voltage gated 1 gamma subunit 0.0152528
ATP11A ATPase, class VI, type 11A 0.0148693
ADAM17 ADAM metallopeptidase domain 17 0.0148445
AP3S1 adaptor-related protein complex 3, sigma 1 subunit 0.0147795
WDFY2 WD repeat and FYVE domain containing 2 0.0147399
USP3 ubiquitin specific peptidase 3 0.0146695
METTL9 methyltransferase like 9 0.0146544
S100P S100 calcium binding protein P 0.0144999
PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2 0.0144654
SEC31A SEC31 homolog A (S. cerevisiae) 0.0144255
UBE2E1 ubiquitin-conjugating enzyme E2E 1 0.0142899
MAML3 mastermind-like 3 (Drosophila) 0.0142884
TPM3 tropomyosin 3 0.0142628
RUNX1 runt-related transcription factor 1 0.014158
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B 0.0137635
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0135284
RNMT RNA (guanine-7-) methyltransferase 0.0134493
ZFP36L1 ZFP36 ring finger protein-like 1 0.0133807
FNBP1L formin binding protein 1-like 0.0132229
KDM6A lysine (K)-specific demethylase 6A 0.0130963
ATP2B4 ATPase, Ca++ transporting, plasma membrane 4 0.0126827
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0126499
DENND3 DENN/MADD domain containing 3 0.0124086

decreased expression

Symbol Name Standardized Value
TXNRD1 thioredoxin reductase 1 -0.127739
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0614243
ASPH aspartate beta-hydroxylase -0.0579514
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0525501
STAT1 signal transducer and activator of transcription 1, 91kDa -0.045237
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0339525
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0312759
DSCAM Down syndrome cell adhesion molecule -0.0306564
NDRG1 N-myc downstream regulated 1 -0.0252712
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) -0.0245278
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0242815
MAP7 microtubule-associated protein 7 -0.0236541
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0234168
VOPP1 vesicular, overexpressed in cancer, prosurvival protein 1 -0.0231632
GOLGB1 golgin B1 -0.0226779
ANKRD12 ankyrin repeat domain 12 -0.0225827
PPFIA1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 -0.0209378
STC1 stanniocalcin 1 -0.0205159
KIAA1217 KIAA1217 -0.0204385
ZBTB20 zinc finger and BTB domain containing 20 -0.0203876
LAMC2 laminin, gamma 2 -0.0202728
JMJD1C jumonji domain containing 1C -0.0201522
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 -0.0200646
TBC1D22A TBC1 domain family, member 22A -0.0195856
VCL vinculin -0.018617
TMCO3 transmembrane and coiled-coil domains 3 -0.0179886
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0179855
LRP1B low density lipoprotein receptor-related protein 1B -0.0178006
NSUN6 NOP2/Sun domain family, member 6 -0.0174781
EGFR epidermal growth factor receptor -0.0170138
CTNND1 catenin (cadherin-associated protein), delta 1 -0.016979
SP100 SP100 nuclear antigen -0.0169077
PTPRD protein tyrosine phosphatase, receptor type, D -0.0166522
EXT1 exostosin glycosyltransferase 1 -0.0164819
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0164403
RAD51B RAD51 paralog B -0.0164287
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0161403
NGLY1 N-glycanase 1 -0.0157766
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0156681
PATJ PATJ crumbs cell polarity complex component -0.0156555
SLC38A1 solute carrier family 38, member 1 -0.0156424
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) -0.0155745
TMTC2 transmembrane and tetratricopeptide repeat containing 2 -0.0154
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0152161
ELL2 elongation factor, RNA polymerase II, 2 -0.0148369
GOLGA4 golgin A4 -0.014724
EYA2 EYA transcriptional coactivator and phosphatase 2 -0.0144601
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.014193
GPAT3 glycerol-3-phosphate acyltransferase 3 -0.0141859
ST14 suppression of tumorigenicity 14 (colon carcinoma) -0.0137876
GPC6 glypican 6 -0.0137686
PRKCE protein kinase C, epsilon -0.0136679
RPLP1 ribosomal protein, large, P1 -0.0135507
PAPOLA poly(A) polymerase alpha -0.0135312
PRELID2 PRELI domain containing 2 -0.0132708
NR4A2 nuclear receptor subfamily 4, group A, member 2 -0.0132347
TMF1 TATA element modulatory factor 1 -0.0127665
REL v-rel avian reticuloendotheliosis viral oncogene homolog -0.012638
AKAP9 A kinase (PRKA) anchor protein 9 -0.0124478
RNF213 ring finger protein 213 -0.0124272
FZR1 fizzy/cell division cycle 20 related 1 (Drosophila) -0.0123944
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) -0.0123674
IGFBP5 insulin-like growth factor binding protein 5 -0.0122682
FAAH2 fatty acid amide hydrolase 2 -0.0122432
CPE carboxypeptidase E -0.0122134
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0121521
IER3 immediate early response 3 -0.0120948
USP53 ubiquitin specific peptidase 53 -0.0120788
PKM pyruvate kinase, muscle -0.0120621
EIF1 eukaryotic translation initiation factor 1 -0.0120296
BTG1 B-cell translocation gene 1, anti-proliferative -0.0115151
FTL ferritin, light polypeptide -0.0114837
SENP5 SUMO1/sentrin specific peptidase 5 -0.0114571
RPS2 ribosomal protein S2 -0.0111517
CEP350 centrosomal protein 350kDa -0.0111209
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) -0.0109593
GPHN gephyrin -0.0109197
KCNK1 potassium channel, two pore domain subfamily K, member 1 -0.0109184
PRRC2C proline-rich coiled-coil 2C -0.0107527
TUFT1 tuftelin 1 -0.010694
PMP22 peripheral myelin protein 22 -0.0106886
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase -0.0106744
B2M beta-2-microglobulin -0.0106442
FRMD4B FERM domain containing 4B -0.00997099
CLTC clathrin, heavy chain (Hc) -0.00989798
PLSCR1 phospholipid scramblase 1 -0.00981722
NFE2L2 nuclear factor, erythroid 2-like 2 -0.00977609
MYCBP2 MYC binding protein 2, E3 ubiquitin protein ligase -0.00964955
RAB27B RAB27B, member RAS oncogene family -0.00957898
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.00955321
ALCAM activated leukocyte cell adhesion molecule -0.00953723
MYO9A myosin IXA -0.00952877
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.00951482
AHR aryl hydrocarbon receptor -0.00949186
BPTF bromodomain PHD finger transcription factor -0.00947162
FNIP1 folliculin interacting protein 1 -0.00914647
RIGI RNA sensor RIG-I -0.00912144
HOMER1 homer scaffolding protein 1 -0.00905056
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase -0.00901027
PTEN phosphatase and tensin homolog -0.00900112