Rucaparib (phosphate)_NCI-H2030 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Rucaparib (phosphate) perturbation in NCI-H2030 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Rucaparib (phosphate)_NCI-H2030 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FTH1 ferritin, heavy polypeptide 1 0.137207
TPM3 tropomyosin 3 0.0713705
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0698837
EEF2 eukaryotic translation elongation factor 2 0.0644753
WDR43 WD repeat domain 43 0.0570332
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.0566541
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0556721
IGF2 insulin-like growth factor 2 0.0518412
AKAP12 A kinase (PRKA) anchor protein 12 0.0498293
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0473431
ZFAND3 zinc finger, AN1-type domain 3 0.0468632
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0459604
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0454752
HSPA8 heat shock 70kDa protein 8 0.0442037
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.042568
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0418387
TPD52 tumor protein D52 0.0403379
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0392915
RTN4 reticulon 4 0.0389339
ZNF292 zinc finger protein 292 0.0359465
MACF1 microtubule-actin crosslinking factor 1 0.0339223
ANKRD11 ankyrin repeat domain 11 0.0327094
PTK2 protein tyrosine kinase 2 0.0325179
RPS4Y1 ribosomal protein S4, Y-linked 1 0.0324271
GLS2 glutaminase 2 (liver, mitochondrial) 0.0319319
AP2B1 adaptor-related protein complex 2, beta 1 subunit 0.0317437
CCNL1 cyclin L1 0.0312017
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0310697
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0303079
ACTG1 actin gamma 1 0.0302574
CYRIB CYFIP related Rac1 interactor B 0.0294689
HDGF hepatoma-derived growth factor 0.0294096
SPAG9 sperm associated antigen 9 0.0288318
RPS12 ribosomal protein S12 0.0285346
PUM1 pumilio RNA-binding family member 1 0.0282211
TFPI2 tissue factor pathway inhibitor 2 0.0276429
KMT2E lysine (K)-specific methyltransferase 2E 0.0275312
USP3 ubiquitin specific peptidase 3 0.026853
APP amyloid beta (A4) precursor protein 0.0266338
POTEF POTE ankyrin domain family, member F 0.0264404
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.0263336
ERRFI1 ERBB receptor feedback inhibitor 1 0.0263114
YBX1 Y box binding protein 1 0.0262584
ENO1 enolase 1, (alpha) 0.0256988
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 0.0256477
RASAL2 RAS protein activator like 2 0.0255396
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0254359
P4HB prolyl 4-hydroxylase, beta polypeptide 0.025435
FLNA filamin A, alpha 0.0254156
MKLN1 muskelin 1, intracellular mediator containing kelch motifs 0.0253759
PAWR PRKC, apoptosis, WT1, regulator 0.0252354
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0250988
BIRC3 baculoviral IAP repeat containing 3 0.024677
JAK1 Janus kinase 1 0.0244668
BRD2 bromodomain containing 2 0.0241229
RBM39 RNA binding motif protein 39 0.0239914
AKAP13 A kinase (PRKA) anchor protein 13 0.0239378
CNOT1 CCR4-NOT transcription complex, subunit 1 0.0238651
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0236884
RPS2 ribosomal protein S2 0.0234841
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0233341
TOP2A topoisomerase (DNA) II alpha 170kDa 0.02326
LPP LIM domain containing preferred translocation partner in lipoma 0.0231067
KIF5B kinesin family member 5B 0.0230294
FGB fibrinogen beta chain 0.023008
UBAP2L ubiquitin associated protein 2-like 0.0228745
NUP58 nucleoporin 58 0.0224728
RPL3 ribosomal protein L3 0.0224546
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 0.022453
MBNL1 muscleblind-like splicing regulator 1 0.0222264
PCBP2 poly(rC) binding protein 2 0.0220614
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0219992
NCKAP1 NCK-associated protein 1 0.0216939
FAM168A family with sequence similarity 168, member A 0.0216678
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0214358
NUP153 nucleoporin 153kDa 0.0211941
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0210413
FXR1 fragile X mental retardation, autosomal homolog 1 0.0210398
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.0209348
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.0208674
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 0.0208642
HLA-A major histocompatibility complex, class I, A 0.0206566
BCLAF1 BCL2-associated transcription factor 1 0.020624
MAP1LC3B microtubule-associated protein 1 light chain 3 beta 0.020522
WAC WW domain containing adaptor with coiled-coil 0.0204796
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.0204327
ELL2 elongation factor, RNA polymerase II, 2 0.0204241
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0204166
EIF4A3 eukaryotic translation initiation factor 4A3 0.0202153
PDIA6 protein disulfide isomerase family A, member 6 0.0201761
CXCL8 chemokine (C-X-C motif) ligand 8 0.0200101
DSCAM Down syndrome cell adhesion molecule 0.0200018
BRD4 bromodomain containing 4 0.0199717
SF1 splicing factor 1 0.0199217
ADAM17 ADAM metallopeptidase domain 17 0.0198865
MYH9 myosin, heavy chain 9, non-muscle 0.0194086
OSBPL9 oxysterol binding protein-like 9 0.0193051
DENND4A DENN/MADD domain containing 4A 0.019104
PUM2 pumilio RNA-binding family member 2 0.0190356
YTHDC1 YTH domain containing 1 0.018771

decreased expression

Symbol Name Standardized Value
FTL ferritin, light polypeptide -0.133506
TMSB10 thymosin beta 10 -0.13244
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0806628
VIM vimentin -0.0733834
C15ORF48 chromosome 15 open reading frame 48 -0.0518806
PDE4D phosphodiesterase 4D, cAMP-specific -0.0516329
MT2A metallothionein 2A -0.051489
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0410434
BASP1 brain abundant, membrane attached signal protein 1 -0.0387671
S100A10 S100 calcium binding protein A10 -0.0349164
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0345409
IER3 immediate early response 3 -0.0340817
RPLP1 ribosomal protein, large, P1 -0.0318183
EIF1 eukaryotic translation initiation factor 1 -0.0263844
THSD4 thrombospondin, type I, domain containing 4 -0.0252195
S100A6 S100 calcium binding protein A6 -0.0243271
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.0243112
GRAMD1B GRAM domain containing 1B -0.0227269
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0214472
TPT1 tumor protein, translationally-controlled 1 -0.0205352
OSMR oncostatin M receptor -0.0200795
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.0199606
RPS24 ribosomal protein S24 -0.0198268
BICC1 BicC family RNA binding protein 1 -0.0189909
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0189167
ARHGAP26 Rho GTPase activating protein 26 -0.0177566
PYGL phosphorylase, glycogen, liver -0.0175056
TXNRD1 thioredoxin reductase 1 -0.0172498
SVIL supervillin -0.0168853
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.016556
PM20D1 peptidase M20 domain containing 1 -0.0159603
PTMA prothymosin, alpha -0.0156854
RPL31 ribosomal protein L31 -0.0154957
RPL23 ribosomal protein L23 -0.015071
RPL19 ribosomal protein L19 -0.0140654
TPM4 tropomyosin 4 -0.0139567
PARK7 parkinson protein 7 -0.0138149
LDHA lactate dehydrogenase A -0.0137115
SERF2 small EDRK-rich factor 2 -0.0136464
FAM107B family with sequence similarity 107, member B -0.0136108
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0133891
VDAC1 voltage-dependent anion channel 1 -0.0130427
NFE2L2 nuclear factor, erythroid 2-like 2 -0.0123231
TM4SF1 transmembrane 4 L six family member 1 -0.0122952
RPS23 ribosomal protein S23 -0.0122443
LANCL1 LanC lantibiotic synthetase component C-like 1 (bacterial) -0.0121909
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.012048
IGFBP3 insulin-like growth factor binding protein 3 -0.0120458
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0115424
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) -0.0114801
LGALS1 lectin, galactoside-binding, soluble, 1 -0.0110664
IGFBP4 insulin-like growth factor binding protein 4 -0.0108582
NPC1 Niemann-Pick disease, type C1 -0.0107692
RPL34 ribosomal protein L34 -0.0106678
ASTN2 astrotactin 2 -0.0106644
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0102061
H1-0 H1.0 linker histone -0.0101803
VCL vinculin -0.0101598
BMP5 bone morphogenetic protein 5 -0.0101083
RPL35A ribosomal protein L35a -0.0100573
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.00993278
SOX4 SRY (sex determining region Y)-box 4 -0.00987006
MAP3K20 mitogen-activated protein kinase kinase kinase 20 -0.00980682
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.00971666
LOC102724023 ES1 protein homolog, mitochondrial -0.00965428
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.00961342
ZBTB20 zinc finger and BTB domain containing 20 -0.00939667
KYNU kynureninase -0.00930205
HMGA2 high mobility group AT-hook 2 -0.00928713
NCOA7 nuclear receptor coactivator 7 -0.00923472
CMIP c-Maf inducing protein -0.00921431
CCT4 chaperonin containing TCP1, subunit 4 (delta) -0.00920569
EFNA5 ephrin-A5 -0.00897837
BLTP2 bridge-like lipid transfer protein family member 2 -0.00892687
RPS5 ribosomal protein S5 -0.00888558
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa -0.00884272
SHANK2 SH3 and multiple ankyrin repeat domains 2 -0.008775
UQCRQ ubiquinol-cytochrome c reductase, complex III subunit VII, 9.5kDa -0.00871776
RPS15 ribosomal protein S15 -0.00870188
NAALADL2 N-acetylated alpha-linked acidic dipeptidase-like 2 -0.00860558
SRP14 signal recognition particle 14kDa (homologous Alu RNA binding protein) -0.00856698
GCC2 GRIP and coiled-coil domain containing 2 -0.00849204
RPS21 ribosomal protein S21 -0.00838329
NPEPPS aminopeptidase puromycin sensitive -0.00832856
ZMYND8 zinc finger, MYND-type containing 8 -0.00829491
BPTF bromodomain PHD finger transcription factor -0.00827952
RPL36A ribosomal protein L36a -0.00823741
CCDC68 coiled-coil domain containing 68 -0.00823619
PGK1 phosphoglycerate kinase 1 -0.00823138
TUBB tubulin, beta class I -0.00819095
EHBP1 EH domain binding protein 1 -0.0080943
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.00804891
CAVIN1 caveolae associated protein 1 -0.00794057
BTG1 B-cell translocation gene 1, anti-proliferative -0.00792692
MARCKS myristoylated alanine-rich protein kinase C substrate -0.00786312
NAV3 neuron navigator 3 -0.00782686
PRSS23 protease, serine, 23 -0.00782627
CUX1 cut-like homeobox 1 -0.00773857
GSTP1 glutathione S-transferase pi 1 -0.00770632
ARPC5 actin related protein 2/3 complex, subunit 5, 16kDa -0.00758875