Rucaparib (phosphate)_NCI-H23 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Rucaparib (phosphate) perturbation in NCI-H23 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Rucaparib (phosphate)_NCI-H23 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
EEF2 eukaryotic translation elongation factor 2 0.0690951
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0555986
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0527233
TPM3 tropomyosin 3 0.0510347
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0479081
COPA coatomer protein complex, subunit alpha 0.0455346
KDM2A lysine (K)-specific demethylase 2A 0.0451808
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0445208
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0413539
ZCCHC7 zinc finger, CCHC domain containing 7 0.0383036
PCBP2 poly(rC) binding protein 2 0.0359512
FXR1 fragile X mental retardation, autosomal homolog 1 0.0317757
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0308578
CAPZA1 capping protein (actin filament) muscle Z-line, alpha 1 0.0305677
CSDE1 cold shock domain containing E1, RNA-binding 0.029885
CCNL1 cyclin L1 0.0295613
CAMTA1 calmodulin binding transcription activator 1 0.0292764
UBAP2L ubiquitin associated protein 2-like 0.028926
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.028825
BRD2 bromodomain containing 2 0.02879
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0269753
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0269564
TFG TRK-fused gene 0.0267495
SPAG9 sperm associated antigen 9 0.0266903
WNK1 WNK lysine deficient protein kinase 1 0.0261007
GNAI3 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 0.0253908
UBC ubiquitin C 0.0248007
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0245605
HELZ helicase with zinc finger 0.0241441
PDIA4 protein disulfide isomerase family A, member 4 0.0240415
RAB7A RAB7A, member RAS oncogene family 0.0239942
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0227661
RAB1A RAB1A, member RAS oncogene family 0.0226374
SRP54 signal recognition particle 54kDa 0.0224619
NOTCH2 notch 2 0.021995
RICTOR RPTOR independent companion of MTOR, complex 2 0.0218759
BIRC6 baculoviral IAP repeat containing 6 0.0217812
LRPPRC leucine-rich pentatricopeptide repeat containing 0.0213765
CSNK1A1 casein kinase 1, alpha 1 0.021317
NCKAP1 NCK-associated protein 1 0.0205593
SNRNP200 small nuclear ribonucleoprotein 200kDa (U5) 0.0205377
HSPA8 heat shock 70kDa protein 8 0.0204407
SEC31A SEC31 homolog A (S. cerevisiae) 0.0203411
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) 0.0203341
KMT2E lysine (K)-specific methyltransferase 2E 0.0202732
RLF rearranged L-myc fusion 0.0200971
UBE2H ubiquitin-conjugating enzyme E2H 0.0198043
NUP58 nucleoporin 58 0.0194367
TLN1 talin 1 0.0194349
COG5 component of oligomeric golgi complex 5 0.0192229
CEP192 centrosomal protein 192kDa 0.0191085
PDIA3 protein disulfide isomerase family A, member 3 0.0188615
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.0187996
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0186311
NUP153 nucleoporin 153kDa 0.0185443
POLR2B polymerase (RNA) II (DNA directed) polypeptide B, 140kDa 0.0183701
ANLN anillin, actin binding protein 0.018172
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0181283
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0179954
ADAR adenosine deaminase, RNA-specific 0.0179182
CNOT1 CCR4-NOT transcription complex, subunit 1 0.0178925
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0178859
JMJD1C jumonji domain containing 1C 0.0178252
EIF2AK3 eukaryotic translation initiation factor 2-alpha kinase 3 0.0176333
UBA6 ubiquitin-like modifier activating enzyme 6 0.0175659
PIK3C2A phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha 0.0175109
TRIP12 thyroid hormone receptor interactor 12 0.0173943
PSME4 proteasome (prosome, macropain) activator subunit 4 0.0173715
CEP135 centrosomal protein 135kDa 0.0171092
NAMPT nicotinamide phosphoribosyltransferase 0.0170542
PTPN11 protein tyrosine phosphatase, non-receptor type 11 0.0170332
RNMT RNA (guanine-7-) methyltransferase 0.0169161
MKLN1 muskelin 1, intracellular mediator containing kelch motifs 0.0169058
CKAP5 cytoskeleton associated protein 5 0.0167027
PDIA6 protein disulfide isomerase family A, member 6 0.0166771
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 0.0166189
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0165942
RPL3 ribosomal protein L3 0.0165416
CANX calnexin 0.0165111
MARCHF7 membrane associated ring-CH-type finger 7 0.0164358
FNIP1 folliculin interacting protein 1 0.01642
OGA O-GlcNAcase 0.0163838
CRY1 cryptochrome circadian clock 1 0.0163672
NBAS neuroblastoma amplified sequence 0.0162998
SUCO SUN domain containing ossification factor 0.016086
OGT O-linked N-acetylglucosamine (GlcNAc) transferase 0.016026
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0160205
KDM3A lysine (K)-specific demethylase 3A 0.0158928
GOLGA4 golgin A4 0.01582
WDR43 WD repeat domain 43 0.0157577
DLGAP5 discs, large (Drosophila) homolog-associated protein 5 0.0156868
TBK1 TANK-binding kinase 1 0.0156765
FLNA filamin A, alpha 0.0155158
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 0.0154722
ESYT2 extended synaptotagmin-like protein 2 0.0154632
ATP13A3 ATPase type 13A3 0.0154587
YBX1 Y box binding protein 1 0.0152843
MARCHF4 membrane associated ring-CH-type finger 4 0.0152676
MSN moesin 0.0151829
PPP2R5E protein phosphatase 2, regulatory subunit B', epsilon isoform 0.0151417

decreased expression

Symbol Name Standardized Value
TMSB10 thymosin beta 10 -0.0747696
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0627388
PTMA prothymosin, alpha -0.0604672
RPS3 ribosomal protein S3 -0.0563209
TFPI2 tissue factor pathway inhibitor 2 -0.053674
VIM vimentin -0.0534294
RPL35A ribosomal protein L35a -0.0525004
GRAMD1B GRAM domain containing 1B -0.0522112
RPL37 ribosomal protein L37 -0.0516885
RPS8 ribosomal protein S8 -0.0491163
MT2A metallothionein 2A -0.0480174
ACTG1 actin gamma 1 -0.0439103
THSD4 thrombospondin, type I, domain containing 4 -0.0434172
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.0429285
RPS21 ribosomal protein S21 -0.0423142
RPL26 ribosomal protein L26 -0.0420948
RIMS2 regulating synaptic membrane exocytosis 2 -0.0403943
RPL23 ribosomal protein L23 -0.0400931
NCOA7 nuclear receptor coactivator 7 -0.0390261
IGF1R insulin-like growth factor 1 receptor -0.0379688
TPT1 tumor protein, translationally-controlled 1 -0.0373486
RPS29 ribosomal protein S29 -0.0364911
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0362522
RPL34 ribosomal protein L34 -0.0351179
RPS19 ribosomal protein S19 -0.0342807
RPL37A ribosomal protein L37a -0.0331127
RPL12 ribosomal protein L12 -0.0321676
RPS12 ribosomal protein S12 -0.0320063
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0301886
TPI1 triosephosphate isomerase 1 -0.0301439
RPLP2 ribosomal protein, large, P2 -0.0291131
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0286407
RPL9 ribosomal protein L9 -0.0285849
RPS27A ribosomal protein S27a -0.0284761
RPS27 ribosomal protein S27 -0.0284438
MYL12B myosin, light chain 12B, regulatory -0.0278532
RAD51B RAD51 paralog B -0.0277631
RPL38 ribosomal protein L38 -0.0275865
OSMR oncostatin M receptor -0.0270049
RPL8 ribosomal protein L8 -0.0269532
RPL32 ribosomal protein L32 -0.0263066
GNAS GNAS complex locus -0.0260332
RPL19 ribosomal protein L19 -0.0255423
NAP1L1 nucleosome assembly protein 1-like 1 -0.0254629
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.025227
EGFR epidermal growth factor receptor -0.0246937
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0246223
YBX3 Y box binding protein 3 -0.0246209
ATRX alpha thalassemia/mental retardation syndrome X-linked -0.0245407
IFI6 interferon, alpha-inducible protein 6 -0.0243525
HMGA2 high mobility group AT-hook 2 -0.0242962
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0240555
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.023932
ZBTB20 zinc finger and BTB domain containing 20 -0.0232692
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0232663
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0232415
RPS6 ribosomal protein S6 -0.0230503
RPLP1 ribosomal protein, large, P1 -0.021989
S100A6 S100 calcium binding protein A6 -0.0217173
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0216821
EIF5B eukaryotic translation initiation factor 5B -0.0215411
NFE2L2 nuclear factor, erythroid 2-like 2 -0.0214421
NTSR1 neurotensin receptor 1 (high affinity) -0.0211304
RPS25 ribosomal protein S25 -0.0210305
ATP11A ATPase, class VI, type 11A -0.020795
DNAH14 dynein, axonemal, heavy chain 14 -0.0207911
KTN1 kinectin 1 (kinesin receptor) -0.020656
RPL11 ribosomal protein L11 -0.0205505
RPL36 ribosomal protein L36 -0.0205215
RPS10 ribosomal protein S10 -0.0204883
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0203878
ATP5F1E ATP synthase F1 subunit epsilon -0.0202355
RPS15 ribosomal protein S15 -0.0202265
RPL36A ribosomal protein L36a -0.020111
WWOX WW domain containing oxidoreductase -0.0196784
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0195098
RPL27 ribosomal protein L27 -0.0190339
RPS24 ribosomal protein S24 -0.0187973
PDE10A phosphodiesterase 10A -0.0186049
RPL31 ribosomal protein L31 -0.0184538
RPL5 ribosomal protein L5 -0.0181483
RPL30 ribosomal protein L30 -0.0181389
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.0179855
DENND5B DENN/MADD domain containing 5B -0.017775
HLA-B major histocompatibility complex, class I, B -0.0177167
NACA nascent polypeptide-associated complex alpha subunit -0.0176863
FTL ferritin, light polypeptide -0.0175033
PFN1 profilin 1 -0.0173986
SMAD3 SMAD family member 3 -0.0172714
TRIM56 tripartite motif containing 56 -0.0171884
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 -0.0171407
CAVIN1 caveolae associated protein 1 -0.0169721
BASP1 brain abundant, membrane attached signal protein 1 -0.016844
IFIH1 interferon induced with helicase C domain 1 -0.0167683
ATG7 autophagy related 7 -0.0165453
CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 -0.016388
S100A10 S100 calcium binding protein A10 -0.0163809
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0163718
RPL35 ribosomal protein L35 -0.0163254
AKAP12 A kinase (PRKA) anchor protein 12 -0.0162368