Rucaparib (phosphate)_NCI-H661 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Rucaparib (phosphate) perturbation in NCI-H661 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Rucaparib (phosphate)_NCI-H661 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0613095
TMSB4X thymosin beta 4, X-linked 0.0512662
ZNF292 zinc finger protein 292 0.0457902
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0424428
DST dystonin 0.0416342
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0407834
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0302269
H1-0 H1.0 linker histone 0.0289956
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.0282627
CCN2 cellular communication network factor 2 0.0279263
SPAG9 sperm associated antigen 9 0.026377
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0257053
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0247077
PDGFC platelet derived growth factor C 0.0245249
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0239361
CKAP5 cytoskeleton associated protein 5 0.0232544
COL5A2 collagen, type V, alpha 2 0.0232522
AHNAK AHNAK nucleoprotein 0.0215893
MYO10 myosin X 0.0207465
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0203985
WDR43 WD repeat domain 43 0.0203891
CKAP2 cytoskeleton associated protein 2 0.0203045
MYH9 myosin, heavy chain 9, non-muscle 0.0202077
MED13L mediator complex subunit 13-like 0.0200093
TPM3 tropomyosin 3 0.0198651
NAMPT nicotinamide phosphoribosyltransferase 0.0196055
NCKAP1 NCK-associated protein 1 0.0189856
PDIA6 protein disulfide isomerase family A, member 6 0.0189839
KMT2C lysine (K)-specific methyltransferase 2C 0.0187164
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) 0.0185234
ITGAV integrin, alpha V 0.0184934
ZNF217 zinc finger protein 217 0.0184121
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0183317
SRP54 signal recognition particle 54kDa 0.0181898
EEF2 eukaryotic translation elongation factor 2 0.0180963
YBX1 Y box binding protein 1 0.0180955
CSDE1 cold shock domain containing E1, RNA-binding 0.0180811
CANX calnexin 0.0180697
FNDC3B fibronectin type III domain containing 3B 0.017927
PEG10 paternally expressed 10 0.0179036
CDC73 cell division cycle 73 0.0177844
CTNNA3 catenin (cadherin-associated protein), alpha 3 0.0176031
QKI QKI, KH domain containing, RNA binding 0.0174906
ARHGAP15 Rho GTPase activating protein 15 0.017119
PLEKHB2 pleckstrin homology domain containing, family B (evectins) member 2 0.0169629
MB21D2 Mab-21 domain containing 2 0.0168103
KPNB1 karyopherin (importin) beta 1 0.0166504
TPX2 TPX2, microtubule-associated 0.0163747
VAPA VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa 0.0163437
BHLHE40 basic helix-loop-helix family, member e40 0.0162189
TSC22D2 TSC22 domain family, member 2 0.0162169
XPO1 exportin 1 0.0161803
ANXA1 annexin A1 0.0161694
MKI67 marker of proliferation Ki-67 0.0161466
ZNF451 zinc finger protein 451 0.015736
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0154981
MTF2 metal response element binding transcription factor 2 0.0154972
CALU calumenin 0.0154359
MACF1 microtubule-actin crosslinking factor 1 0.0151852
ADAM9 ADAM metallopeptidase domain 9 0.0149683
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0149471
ENO1 enolase 1, (alpha) 0.014733
TRIO trio Rho guanine nucleotide exchange factor 0.0146589
ANXA5 annexin A5 0.0146513
RAI1 retinoic acid induced 1 0.0145214
PTPN11 protein tyrosine phosphatase, non-receptor type 11 0.0144237
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0143241
U2SURP U2 snRNP-associated SURP domain containing 0.0136314
KCTD16 potassium channel tetramerization domain containing 16 0.0134176
YAP1 Yes-associated protein 1 0.0131561
RPS2 ribosomal protein S2 0.0131167
RAB1A RAB1A, member RAS oncogene family 0.0131095
ANXA2 annexin A2 0.0130725
DHX9 DEAH (Asp-Glu-Ala-His) box helicase 9 0.0130359
PFN1 profilin 1 0.0129745
YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta 0.0129616
CCT5 chaperonin containing TCP1, subunit 5 (epsilon) 0.0128447
HMGB2 high mobility group box 2 0.0126138
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0124969
UBAP2L ubiquitin associated protein 2-like 0.0124437
RAD23B RAD23 homolog B (S. cerevisiae) 0.0123691
SNRNP200 small nuclear ribonucleoprotein 200kDa (U5) 0.0123618
PSMA6 proteasome (prosome, macropain) subunit, alpha type, 6 0.0122349
ZFR zinc finger RNA binding protein 0.0122099
USP3 ubiquitin specific peptidase 3 0.0121461
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 0.0120861
DLGAP5 discs, large (Drosophila) homolog-associated protein 5 0.0120587
HNRNPM heterogeneous nuclear ribonucleoprotein M 0.0119722
INTS13 integrator complex subunit 13 0.0119352
ZNF608 zinc finger protein 608 0.0119212
YES1 YES proto-oncogene 1, Src family tyrosine kinase 0.0119147
FOXG1 forkhead box G1 0.0118428
TMED9 transmembrane emp24 protein transport domain containing 9 0.0118154
RIOK3 RIO kinase 3 0.0118102
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0117956
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.011736
ATG5 autophagy related 5 0.0116742
CTNNA2 catenin (cadherin-associated protein), alpha 2 0.0116182
NPTN neuroplastin 0.0115106
PDIA4 protein disulfide isomerase family A, member 4 0.0113195

decreased expression

Symbol Name Standardized Value
TMSB10 thymosin beta 10 -0.0744488
VIM vimentin -0.0551876
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0538724
RPLP1 ribosomal protein, large, P1 -0.0365265
PTMA prothymosin, alpha -0.0295489
FTL ferritin, light polypeptide -0.029538
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.028418
RPL31 ribosomal protein L31 -0.0277518
CDH6 cadherin 6, type 2, K-cadherin (fetal kidney) -0.0264621
RPS16 ribosomal protein S16 -0.0252951
PCLO piccolo presynaptic cytomatrix protein -0.0246873
HS3ST5 heparan sulfate (glucosamine) 3-O-sulfotransferase 5 -0.0238746
CDH19 cadherin 19, type 2 -0.0237848
RPS8 ribosomal protein S8 -0.0230971
FOXP2 forkhead box P2 -0.0230889
RPS24 ribosomal protein S24 -0.0214305
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.019698
APOE apolipoprotein E -0.0192461
PCDH9 protocadherin 9 -0.0187026
LOC102724023 ES1 protein homolog, mitochondrial -0.0183772
TPT1 tumor protein, translationally-controlled 1 -0.0182857
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0159379
GNAS GNAS complex locus -0.0158634
SNX6 sorting nexin 6 -0.0156819
WASF2 WAS protein family, member 2 -0.015676
BACH2 BTB and CNC homology 1, basic leucine zipper transcription factor 2 -0.0155605
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0155437
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0154347
RBM25 RNA binding motif protein 25 -0.0152021
RFPL4B ret finger protein-like 4B -0.0146736
RPL36A ribosomal protein L36a -0.0146328
WSB1 WD repeat and SOCS box containing 1 -0.0145468
RPS27 ribosomal protein S27 -0.0144269
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase -0.0143177
GALNTL6 polypeptide N-acetylgalactosaminyltransferase-like 6 -0.0140243
PARK7 parkinson protein 7 -0.0136066
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0135648
RLF rearranged L-myc fusion -0.0130945
CDH10 cadherin 10, type 2 (T2-cadherin) -0.0129172
RPS19 ribosomal protein S19 -0.0128963
CCT4 chaperonin containing TCP1, subunit 4 (delta) -0.0128745
PAFAH1B1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa) -0.0127897
RPL9 ribosomal protein L9 -0.0126051
DNAJB1 DnaJ (Hsp40) homolog, subfamily B, member 1 -0.0125865
HSPB1 heat shock 27kDa protein 1 -0.0123979
TMTC2 transmembrane and tetratricopeptide repeat containing 2 -0.0123644
SERF2 small EDRK-rich factor 2 -0.0123569
NSD1 nuclear receptor binding SET domain protein 1 -0.0123526
PHIP pleckstrin homology domain interacting protein -0.0117095
TENM3 teneurin transmembrane protein 3 -0.0116066
RPL37 ribosomal protein L37 -0.0114
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) -0.0113291
RPL19 ribosomal protein L19 -0.0113257
PLPP1 phospholipid phosphatase 1 -0.0113149
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0112947
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0112264
INTS6 integrator complex subunit 6 -0.0111442
RPL30 ribosomal protein L30 -0.0111381
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.011107
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0110114
FST follistatin -0.0108901
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0108836
YARS1 tyrosyl-tRNA synthetase 1 -0.0108815
TIMP2 TIMP metallopeptidase inhibitor 2 -0.0108505
CCDC138 coiled-coil domain containing 138 -0.0107647
ZFPM2 zinc finger protein, FOG family member 2 -0.0107553
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 -0.0107184
MRPS30 mitochondrial ribosomal protein S30 -0.0107061
RPL27A ribosomal protein L27a -0.0106753
NDFIP1 Nedd4 family interacting protein 1 -0.0105657
TJP1 tight junction protein 1 -0.0105196
RPL11 ribosomal protein L11 -0.0104997
CSNK1A1 casein kinase 1, alpha 1 -0.0104925
RPS23 ribosomal protein S23 -0.0103444
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 -0.0102834
NXN nucleoredoxin -0.0102315
RPL35A ribosomal protein L35a -0.0101512
LRRC4C leucine rich repeat containing 4C -0.0101084
UQCRB ubiquinol-cytochrome c reductase binding protein -0.00999903
GPATCH8 G patch domain containing 8 -0.00995515
RPS25 ribosomal protein S25 -0.00994539
DCAF7 DDB1 and CUL4 associated factor 7 -0.0099404
RPS17 ribosomal protein S17 -0.00993625
EGLN3 egl-9 family hypoxia-inducible factor 3 -0.00988929
SKIL SKI-like proto-oncogene -0.00986713
CECR2 cat eye syndrome chromosome region, candidate 2 -0.00981767
ASTN2 astrotactin 2 -0.00965945
ID1 inhibitor of DNA binding 1, dominant negative helix-loop-helix protein -0.00965084
PDCD10 programmed cell death 10 -0.00955315
TNRC6B trinucleotide repeat containing 6B -0.00950861
SRP14 signal recognition particle 14kDa (homologous Alu RNA binding protein) -0.00948271
PCNX4 pecanex 4 -0.00945516
SIK2 salt-inducible kinase 2 -0.00939221
RAD51B RAD51 paralog B -0.00932378
NCOR1 nuclear receptor corepressor 1 -0.00926159
LDHA lactate dehydrogenase A -0.00923431
FOXC1 forkhead box C1 -0.00912146
SIPA1L3 signal-induced proliferation-associated 1 like 3 -0.00909622
EAPP E2F-associated phosphoprotein -0.00898075
UBE2R2 ubiquitin-conjugating enzyme E2R 2 -0.00895967