Rucaparib (phosphate)_SW48 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Rucaparib (phosphate) perturbation in SW48 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Rucaparib (phosphate)_SW48 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
ANXA1 annexin A1 0.0774208
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0749384
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0703034
EEF2 eukaryotic translation elongation factor 2 0.0493659
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0472987
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0409031
GARS1 glycyl-tRNA synthetase 1 0.0406417
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0401703
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0397316
DDIT4 DNA-damage-inducible transcript 4 0.0394569
PTMA prothymosin, alpha 0.0389667
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0386505
WAC WW domain containing adaptor with coiled-coil 0.0381487
HILPDA hypoxia inducible lipid droplet-associated 0.037188
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0355705
NUP58 nucleoporin 58 0.0350595
ANXA2 annexin A2 0.034777
DSPP dentin sialophosphoprotein 0.0341912
TSC22D2 TSC22 domain family, member 2 0.0335539
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0315375
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0307757
HSPA8 heat shock 70kDa protein 8 0.0302526
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0293775
BIRC3 baculoviral IAP repeat containing 3 0.0289682
NCKAP1 NCK-associated protein 1 0.0285996
MYO5B myosin VB 0.0281102
KDM6A lysine (K)-specific demethylase 6A 0.0277237
UBE2E1 ubiquitin-conjugating enzyme E2E 1 0.0270227
EPHA2 EPH receptor A2 0.0269488
ZNF292 zinc finger protein 292 0.0261496
PUM1 pumilio RNA-binding family member 1 0.0261066
BRD2 bromodomain containing 2 0.0258061
PARD3 par-3 family cell polarity regulator 0.0256009
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.0251309
FBXO11 F-box protein 11 0.0250509
RPL3 ribosomal protein L3 0.0249097
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.0245963
RPS2 ribosomal protein S2 0.0243511
KMT2C lysine (K)-specific methyltransferase 2C 0.023856
CD36 CD36 molecule (thrombospondin receptor) 0.0238001
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0236137
RNF145 ring finger protein 145 0.0233617
AREG amphiregulin 0.0231801
FXR1 fragile X mental retardation, autosomal homolog 1 0.023169
ANKRD11 ankyrin repeat domain 11 0.0229939
HERPUD1 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 0.0229734
ZFP36L1 ZFP36 ring finger protein-like 1 0.0229189
USP3 ubiquitin specific peptidase 3 0.0227799
OGT O-linked N-acetylglucosamine (GlcNAc) transferase 0.0223836
FTH1 ferritin, heavy polypeptide 1 0.0220522
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0220265
PDIA3 protein disulfide isomerase family A, member 3 0.0219069
RPS3 ribosomal protein S3 0.0216902
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.02168
FMNL2 formin-like 2 0.0212754
NDRG1 N-myc downstream regulated 1 0.0212732
PDIA6 protein disulfide isomerase family A, member 6 0.0211991
EPS8 epidermal growth factor receptor pathway substrate 8 0.0210971
HOOK2 hook microtubule-tethering protein 2 0.0210881
CCNL1 cyclin L1 0.0210469
VMP1 vacuole membrane protein 1 0.0210438
RBM39 RNA binding motif protein 39 0.0210292
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0210291
VEGFA vascular endothelial growth factor A 0.0208242
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b 0.0207646
SRRM1 serine/arginine repetitive matrix 1 0.0207515
RPS12 ribosomal protein S12 0.0206965
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.020554
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0198431
RLF rearranged L-myc fusion 0.0198212
IARS1 isoleucyl-tRNA synthetase 1 0.0198191
RPL5 ribosomal protein L5 0.0197554
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0194225
SEMA3B sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B 0.019405
GPBP1 GC-rich promoter binding protein 1 0.019072
PSME4 proteasome (prosome, macropain) activator subunit 4 0.0190269
DHX9 DEAH (Asp-Glu-Ala-His) box helicase 9 0.0188499
CD46 CD46 molecule, complement regulatory protein 0.0188454
KMT2E lysine (K)-specific methyltransferase 2E 0.0188329
LRPPRC leucine-rich pentatricopeptide repeat containing 0.0188272
FAT1 FAT atypical cadherin 1 0.0188124
RUNX2 runt-related transcription factor 2 0.0187169
SETD5 SET domain containing 5 0.018525
RAD23B RAD23 homolog B (S. cerevisiae) 0.0183991
PUM2 pumilio RNA-binding family member 2 0.01829
GOLGA4 golgin A4 0.018068
TXNIP thioredoxin interacting protein 0.0180017
RAB1A RAB1A, member RAS oncogene family 0.0179956
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 0.0179264
UBC ubiquitin C 0.0178655
RCOR1 REST corepressor 1 0.0176678
MYO1B myosin IB 0.0175886
DIAPH1 diaphanous-related formin 1 0.0175312
SLC7A5 solute carrier family 7 (amino acid transporter light chain, L system), member 5 0.017516
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0175058
YTHDC1 YTH domain containing 1 0.017426
ARHGAP32 Rho GTPase activating protein 32 0.0174177
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0173579
CYP51A1 cytochrome P450, family 51, subfamily A, polypeptide 1 0.0172712
UBA6 ubiquitin-like modifier activating enzyme 6 0.0172454

decreased expression

Symbol Name Standardized Value
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0741827
HMGA2 high mobility group AT-hook 2 -0.0684414
LMO7 LIM domain 7 -0.0516596
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0506281
TMSB10 thymosin beta 10 -0.0430989
FERMT1 fermitin family member 1 -0.0377558
EGFR epidermal growth factor receptor -0.0341793
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0306632
RPLP1 ribosomal protein, large, P1 -0.029842
RPS24 ribosomal protein S24 -0.0296888
TPT1 tumor protein, translationally-controlled 1 -0.0274399
ACTG1 actin gamma 1 -0.026389
RBM25 RNA binding motif protein 25 -0.0255449
SYNE2 spectrin repeat containing, nuclear envelope 2 -0.024653
RNF43 ring finger protein 43 -0.0241533
CENPF centromere protein F, 350/400kDa -0.0234095
LAMC2 laminin, gamma 2 -0.0231309
VCL vinculin -0.0218172
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0208142
MKI67 marker of proliferation Ki-67 -0.0187546
SMYD3 SET and MYND domain containing 3 -0.018128
FLOT1 flotillin 1 -0.0179389
TBC1D22A TBC1 domain family, member 22A -0.0174193
BMAL2 basic helix-loop-helix ARNT like 2 -0.0172358
JARID2 jumonji, AT rich interactive domain 2 -0.0169922
TCF12 transcription factor 12 -0.0167942
CDCP1 CUB domain containing protein 1 -0.0165148
TTC3 tetratricopeptide repeat domain 3 -0.0164734
MTAP methylthioadenosine phosphorylase -0.0164094
CCSER1 coiled-coil serine-rich protein 1 -0.0164028
RAD51B RAD51 paralog B -0.0162509
AGPAT3 1-acylglycerol-3-phosphate O-acyltransferase 3 -0.0162202
EVA1C eva-1 homolog C (C. elegans) -0.0159238
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0159088
KLF5 Kruppel-like factor 5 (intestinal) -0.0154551
DUSP4 dual specificity phosphatase 4 -0.0151678
KTN1 kinectin 1 (kinesin receptor) -0.0147809
LAMB3 laminin, beta 3 -0.0147341
NFE2L2 nuclear factor, erythroid 2-like 2 -0.0146648
GCLC glutamate-cysteine ligase, catalytic subunit -0.0145301
CENPE centromere protein E, 312kDa -0.0144679
AKAP9 A kinase (PRKA) anchor protein 9 -0.0144108
PLAUR plasminogen activator, urokinase receptor -0.0143824
FBXL17 F-box and leucine-rich repeat protein 17 -0.0143822
FHL2 four and a half LIM domains 2 -0.014179
NT5DC3 5'-nucleotidase domain containing 3 -0.0137589
ATXN1 ataxin 1 -0.0136969
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.0135859
RPL4 ribosomal protein L4 -0.0134734
NTSR1 neurotensin receptor 1 (high affinity) -0.0133105
SKAP1 src kinase associated phosphoprotein 1 -0.0133004
PARP4 poly (ADP-ribose) polymerase family, member 4 -0.0132503
RPS28 ribosomal protein S28 -0.013171
SAMD5 sterile alpha motif domain containing 5 -0.0131281
MPP2 membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2) -0.0131273
KIZ kizuna centrosomal protein -0.0130785
LOC102724023 ES1 protein homolog, mitochondrial -0.0130753
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 -0.0128679
SMC5 structural maintenance of chromosomes 5 -0.0128267
PATJ PATJ crumbs cell polarity complex component -0.0127614
EXOC4 exocyst complex component 4 -0.0126393
ZBTB20 zinc finger and BTB domain containing 20 -0.0122854
SEPTIN9 septin 9 -0.0122197
SGPP2 sphingosine-1-phosphate phosphatase 2 -0.0121079
HECTD1 HECT domain containing E3 ubiquitin protein ligase 1 -0.011901
THSD4 thrombospondin, type I, domain containing 4 -0.0116513
S100A6 S100 calcium binding protein A6 -0.0116022
RPS21 ribosomal protein S21 -0.0115944
HDLBP high density lipoprotein binding protein -0.0114845
UGDH UDP-glucose 6-dehydrogenase -0.0114135
ITFG1 integrin alpha FG-GAP repeat containing 1 -0.0114087
SENP5 SUMO1/sentrin specific peptidase 5 -0.0113591
DOCK1 dedicator of cytokinesis 1 -0.0112148
TMTC2 transmembrane and tetratricopeptide repeat containing 2 -0.0111758
EXPH5 exophilin 5 -0.011066
AVL9 AVL9 homolog (S. cerevisiase) -0.0109994
AGO2 argonaute RISC catalytic component 2 -0.0109609
DDX50 DEAD (Asp-Glu-Ala-Asp) box polypeptide 50 -0.0109166
TRPM7 transient receptor potential cation channel, subfamily M, member 7 -0.0108921
RPL36A ribosomal protein L36a -0.0108382
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) -0.0108291
ANAPC5 anaphase promoting complex subunit 5 -0.0107218
ARB2A ARB2 cotranscriptional regulator A -0.0106915
ZNF106 zinc finger protein 106 -0.0106735
SUN1 Sad1 and UNC84 domain containing 1 -0.0105151
NEBL nebulette -0.0104755
SPATA13 spermatogenesis associated 13 -0.0104618
PFKP phosphofructokinase, platelet -0.0104004
UTRN utrophin -0.0103621
TPM4 tropomyosin 4 -0.0103463
PDS5A PDS5 cohesin associated factor A -0.0103459
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 -0.0103283
EZR ezrin -0.0103267
SMAD3 SMAD family member 3 -0.0102646
SCLT1 sodium channel and clathrin linker 1 -0.0102525
USP9X ubiquitin specific peptidase 9, X-linked -0.0102484
TGFB2 transforming growth factor, beta 2 -0.0101989
TNS3 tensin 3 -0.0101971
CMIP c-Maf inducing protein -0.0101959
ESYT2 extended synaptotagmin-like protein 2 -0.0101659