Rucaparib (phosphate)_SW480 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Rucaparib (phosphate) perturbation in SW480 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Rucaparib (phosphate)_SW480 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
NKD1 naked cuticle homolog 1 (Drosophila) 0.186429
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) 0.104937
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) 0.0760574
SYT1 synaptotagmin I 0.0617789
MAML2 mastermind-like 2 (Drosophila) 0.0586546
ATXN1 ataxin 1 0.0582262
RUNX1 runt-related transcription factor 1 0.0554996
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0541142
PDE4D phosphodiesterase 4D, cAMP-specific 0.0535091
AHNAK AHNAK nucleoprotein 0.0516762
NAV2 neuron navigator 2 0.0515058
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0511082
DST dystonin 0.0491843
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 0.0470698
DSPP dentin sialophosphoprotein 0.0456577
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0442915
TNS3 tensin 3 0.0442575
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0431891
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.042739
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0415142
MYCBP2 MYC binding protein 2, E3 ubiquitin protein ligase 0.0394934
ENO1 enolase 1, (alpha) 0.0393473
MACF1 microtubule-actin crosslinking factor 1 0.039104
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0383039
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 0.0377398
EEF2 eukaryotic translation elongation factor 2 0.0371428
PTPN14 protein tyrosine phosphatase, non-receptor type 14 0.0365601
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0364729
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0361013
LMO7 LIM domain 7 0.0359792
PROX1 prospero homeobox 1 0.0356063
ZBTB20 zinc finger and BTB domain containing 20 0.0353248
MKI67 marker of proliferation Ki-67 0.0351862
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0349422
MYH9 myosin, heavy chain 9, non-muscle 0.0349341
ANLN anillin, actin binding protein 0.0342855
AOPEP aminopeptidase O (putative) 0.0342338
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0341708
ANXA2 annexin A2 0.0341025
KRT18 keratin 18, type I 0.0335625
KRT8 keratin 8, type II 0.0333894
OXR1 oxidation resistance 1 0.0330285
TMEM123 transmembrane protein 123 0.0326712
ITGA6 integrin, alpha 6 0.0324844
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0324419
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0320355
TMSB4X thymosin beta 4, X-linked 0.0319819
FYN FYN proto-oncogene, Src family tyrosine kinase 0.0313273
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) 0.0312231
SBF2 SET binding factor 2 0.0307698
CDK6 cyclin-dependent kinase 6 0.0304525
MED13 mediator complex subunit 13 0.0303352
MACC1 metastasis associated in colon cancer 1 0.0301993
WWOX WW domain containing oxidoreductase 0.0297498
HDAC4 histone deacetylase 4 0.0295724
CDKAL1 CDK5 regulatory subunit associated protein 1-like 1 0.0292621
PGK1 phosphoglycerate kinase 1 0.0289624
EFNB2 ephrin-B2 0.0289327
TPT1 tumor protein, translationally-controlled 1 0.0283122
ZMYND8 zinc finger, MYND-type containing 8 0.0282825
MAN1A1 mannosidase, alpha, class 1A, member 1 0.0281765
ATRX alpha thalassemia/mental retardation syndrome X-linked 0.0280323
RASSF6 Ras association (RalGDS/AF-6) domain family member 6 0.0279508
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0278898
CEMIP2 cell migration inducing hyaluronidase 2 0.0278559
NIPBL Nipped-B homolog (Drosophila) 0.0277231
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0272738
LPP LIM domain containing preferred translocation partner in lipoma 0.0272361
ZNF292 zinc finger protein 292 0.0269433
HDAC8 histone deacetylase 8 0.0268276
BRWD3 bromodomain and WD repeat domain containing 3 0.0266854
SPATA13 spermatogenesis associated 13 0.0265771
WDFY2 WD repeat and FYVE domain containing 2 0.0265614
BCL2L1 BCL2-like 1 0.0265202
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 0.0264081
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.0257326
BPTF bromodomain PHD finger transcription factor 0.0251772
SRRM2 serine/arginine repetitive matrix 2 0.0251744
PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2 0.0250476
SKAP1 src kinase associated phosphoprotein 1 0.0249635
FOXP1 forkhead box P1 0.0248142
ETNK1 ethanolamine kinase 1 0.0247694
VIM vimentin 0.0246885
TGFBR2 transforming growth factor, beta receptor II (70/80kDa) 0.0244364
RAD51B RAD51 paralog B 0.0243734
NF1 neurofibromin 1 0.0239566
JMJD1C jumonji domain containing 1C 0.0237719
ACTN4 actinin, alpha 4 0.0237179
YAP1 Yes-associated protein 1 0.0236832
SMYD3 SET and MYND domain containing 3 0.0236079
ANKRD28 ankyrin repeat domain 28 0.0235614
ERC1 ELKS/RAB6-interacting/CAST family member 1 0.0234577
APP amyloid beta (A4) precursor protein 0.0234346
CDH13 cadherin 13 0.0233279
NCEH1 neutral cholesterol ester hydrolase 1 0.0233243
EZR ezrin 0.0230206
TMEM163 transmembrane protein 163 0.0228375
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0227031
CMIP c-Maf inducing protein 0.0227029
KIZ kizuna centrosomal protein 0.022677

decreased expression

Symbol Name Standardized Value
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.032333
MT2A metallothionein 2A -0.023785
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0194148
RPS19 ribosomal protein S19 -0.0187334
MRPS6 mitochondrial ribosomal protein S6 -0.0151478
SDK1 sidekick cell adhesion molecule 1 -0.0147986
RPL35A ribosomal protein L35a -0.0144108
INTS6 integrator complex subunit 6 -0.0137725
TMSB10 thymosin beta 10 -0.0128652
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0127553
MT1X metallothionein 1X -0.01263
EGR1 early growth response 1 -0.0120311
RPL12 ribosomal protein L12 -0.0101695
IGF2 insulin-like growth factor 2 -0.00903912
NSMF NMDA receptor synaptonuclear signaling and neuronal migration factor -0.00846473
ANO1 anoctamin 1, calcium activated chloride channel -0.00838764
RPL18 ribosomal protein L18 -0.00806511
PDGFA platelet-derived growth factor alpha polypeptide -0.00796713
UBAP2 ubiquitin associated protein 2 -0.00757519
SLC20A1 solute carrier family 20 (phosphate transporter), member 1 -0.00736712
RPS6 ribosomal protein S6 -0.00732308
POTEF POTE ankyrin domain family, member F -0.00706206
RPS29 ribosomal protein S29 -0.00672094
RPS23 ribosomal protein S23 -0.0067066
DHFR dihydrofolate reductase -0.0066299
SEC61G Sec61 gamma subunit -0.00652249
ENO2 enolase 2 (gamma, neuronal) -0.0063818
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.00636764
RPL36 ribosomal protein L36 -0.00611616
PER1 period circadian clock 1 -0.00600987
DDIT3 DNA-damage-inducible transcript 3 -0.0059985
RPL23 ribosomal protein L23 -0.00583502
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide -0.005781
RPL21 ribosomal protein L21 -0.00572917
FOSB FBJ murine osteosarcoma viral oncogene homolog B -0.00572895
HMGA1 high mobility group AT-hook 1 -0.00565106
DDIT4 DNA-damage-inducible transcript 4 -0.00564527
WSB1 WD repeat and SOCS box containing 1 -0.00561562
ZCCHC7 zinc finger, CCHC domain containing 7 -0.00559829
ZFP36L1 ZFP36 ring finger protein-like 1 -0.00552988
RNF145 ring finger protein 145 -0.0054891
LUC7L3 LUC7-like 3 (S. cerevisiae) -0.00535351
HSPH1 heat shock 105kDa/110kDa protein 1 -0.00534006
FNDC3B fibronectin type III domain containing 3B -0.00530305
RPS3 ribosomal protein S3 -0.00528896
PPDPF pancreatic progenitor cell differentiation and proliferation factor -0.00519272
NOP58 NOP58 ribonucleoprotein -0.00517644
NDUFA4 NDUFA4, mitochondrial complex associated -0.00509645
FOSL2 FOS-like antigen 2 -0.00505502
RPL34 ribosomal protein L34 -0.00499842
GNB2 guanine nucleotide binding protein (G protein), beta polypeptide 2 -0.00494141
RPS14 ribosomal protein S14 -0.00490869
TBC1D4 TBC1 domain family, member 4 -0.00485338
ZMIZ2 zinc finger, MIZ-type containing 2 -0.00482522
SH3BGRL3 SH3 domain binding glutamate-rich protein like 3 -0.00476421
CLSTN2 calsyntenin 2 -0.00474876
CDK2AP2 cyclin-dependent kinase 2 associated protein 2 -0.00472627
CTNNA3 catenin (cadherin-associated protein), alpha 3 -0.00460179
FTL ferritin, light polypeptide -0.00458134
ROMO1 reactive oxygen species modulator 1 -0.00452298
PRKAR1B protein kinase, cAMP-dependent, regulatory, type I, beta -0.00451475
EEF1G eukaryotic translation elongation factor 1 gamma -0.00442856
CALR calreticulin -0.00434549
SPCS2 signal peptidase complex subunit 2 homolog (S. cerevisiae) -0.00433031
COX7A2L cytochrome c oxidase subunit VIIa polypeptide 2 like -0.0042516
ANKRD37 ankyrin repeat domain 37 -0.00420221
BAIAP2 BAI1-associated protein 2 -0.00420119
DLC1 DLC1 Rho GTPase activating protein -0.00417215
TGFB1 transforming growth factor, beta 1 -0.00416798
HERPUD1 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 -0.00410025
CACNB4 calcium channel, voltage-dependent, beta 4 subunit -0.0040714
RPL27 ribosomal protein L27 -0.00406805
TOB1 transducer of ERBB2, 1 -0.00405886
STPG4 sperm-tail PG-rich repeat containing 4 -0.00397614
FAM107B family with sequence similarity 107, member B -0.00397186
IER3 immediate early response 3 -0.00396554
PCBP3 poly(rC) binding protein 3 -0.00395332
KIAA0930 KIAA0930 -0.00392058
ERLEC1 endoplasmic reticulum lectin 1 -0.00390319
ADAM20 ADAM metallopeptidase domain 20 -0.00390285
RPS10 ribosomal protein S10 -0.00388961
EIF2AK3 eukaryotic translation initiation factor 2-alpha kinase 3 -0.00388826
EEIG1 estrogen-induced osteoclastogenesis regulator 1 -0.00386844
DNAJC15 DnaJ (Hsp40) homolog, subfamily C, member 15 -0.00385914
TGM2 transglutaminase 2 -0.00385077
TBCA tubulin folding cofactor A -0.00384019
SPNS2 spinster homolog 2 (Drosophila) -0.00383839
GULP1 GULP, engulfment adaptor PTB domain containing 1 -0.00382496
SMIM29 small integral membrane protein 29 -0.00381832
CADM1 cell adhesion molecule 1 -0.0038024
ADM adrenomedullin -0.0037995
NGFR nerve growth factor receptor -0.0037768
KHDRBS3 KH domain containing, RNA binding, signal transduction associated 3 -0.00373989
COX6B1 cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous) -0.00373632
NTM neurotrimin -0.00372736
VAMP2 vesicle-associated membrane protein 2 (synaptobrevin 2) -0.00372497
SERINC2 serine incorporator 2 -0.00372209
ZFP36 ZFP36 ring finger protein -0.00371931
S100P S100 calcium binding protein P -0.00369917
ARLN allregulin -0.00367457