Rucaparib (phosphate)_hTERT-HPNE Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Rucaparib (phosphate) perturbation in hTERT-HPNE cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Rucaparib (phosphate)_hTERT-HPNE drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
STC1 stanniocalcin 1 0.184582
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.163238
VIM vimentin 0.111662
FAM13A family with sequence similarity 13, member A 0.0951306
ELL2 elongation factor, RNA polymerase II, 2 0.0853862
FN1 fibronectin 1 0.0800823
NDRG1 N-myc downstream regulated 1 0.0797911
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0791277
SPAG9 sperm associated antigen 9 0.0650054
MYH9 myosin, heavy chain 9, non-muscle 0.0533593
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0512271
CALU calumenin 0.0506296
SOD2 superoxide dismutase 2, mitochondrial 0.0499223
ADM adrenomedullin 0.0467476
CD44 CD44 molecule (Indian blood group) 0.0455993
ARHGAP21 Rho GTPase activating protein 21 0.0453879
GOLGA4 golgin A4 0.0453038
INHBA inhibin, beta A 0.0426585
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0405236
NAMPT nicotinamide phosphoribosyltransferase 0.0405182
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0402968
ZNF292 zinc finger protein 292 0.0396438
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0391202
FNDC3B fibronectin type III domain containing 3B 0.0382653
ATP13A3 ATPase type 13A3 0.0377599
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0375598
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0362217
FTH1 ferritin, heavy polypeptide 1 0.0359441
MT2A metallothionein 2A 0.0354618
ANXA2 annexin A2 0.0321502
HIPK2 homeodomain interacting protein kinase 2 0.0321197
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0318286
EEF2 eukaryotic translation elongation factor 2 0.0316356
TM4SF1 transmembrane 4 L six family member 1 0.030965
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0288667
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0286539
TRIO trio Rho guanine nucleotide exchange factor 0.027915
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit 0.0273323
B2M beta-2-microglobulin 0.0272228
NUP58 nucleoporin 58 0.0269011
ENO1 enolase 1, (alpha) 0.0263852
BHLHE40 basic helix-loop-helix family, member e40 0.0261855
KDM3A lysine (K)-specific demethylase 3A 0.02613
USP3 ubiquitin specific peptidase 3 0.0258556
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0256293
OGA O-GlcNAcase 0.024683
TMSB4X thymosin beta 4, X-linked 0.0246721
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0246521
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0243782
ARRDC3 arrestin domain containing 3 0.0241774
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0238856
ANKRD28 ankyrin repeat domain 28 0.0236249
CDC27 cell division cycle 27 0.0235519
PDE4D phosphodiesterase 4D, cAMP-specific 0.0235239
CALR calreticulin 0.0231308
RUNX1 runt-related transcription factor 1 0.0230934
LCORL ligand dependent nuclear receptor corepressor-like 0.0228131
COL4A1 collagen, type IV, alpha 1 0.0226236
SRGN serglycin 0.0225236
COPA coatomer protein complex, subunit alpha 0.0225122
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0224382
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0223069
NAV2 neuron navigator 2 0.0219602
LOX lysyl oxidase 0.0219245
COL4A2 collagen, type IV, alpha 2 0.0214987
MXI1 MAX interactor 1, dimerization protein 0.021422
YBX1 Y box binding protein 1 0.0213427
RAB8B RAB8B, member RAS oncogene family 0.021292
SGIP1 SH3-domain GRB2-like (endophilin) interacting protein 1 0.0212818
AP3B1 adaptor-related protein complex 3, beta 1 subunit 0.0210872
SUCO SUN domain containing ossification factor 0.0210729
SLC6A6 solute carrier family 6 (neurotransmitter transporter), member 6 0.0207763
HELZ helicase with zinc finger 0.0204008
ALCAM activated leukocyte cell adhesion molecule 0.0202836
NBAS neuroblastoma amplified sequence 0.0199516
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0197939
LGALS1 lectin, galactoside-binding, soluble, 1 0.019716
TNKS tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 0.0196202
LOC112694756 uncharaterized LOC112694756 0.0195373
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0195115
SETD5 SET domain containing 5 0.0195065
RTN4 reticulon 4 0.0194867
YBX3 Y box binding protein 3 0.0194817
CLINT1 clathrin interactor 1 0.0192854
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 0.0192014
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0190947
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0190586
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0190524
RNMT RNA (guanine-7-) methyltransferase 0.0190438
WDFY1 WD repeat and FYVE domain containing 1 0.0189623
SEC31A SEC31 homolog A (S. cerevisiae) 0.0189435
UGCG UDP-glucose ceramide glucosyltransferase 0.0188852
UBA6 ubiquitin-like modifier activating enzyme 6 0.0187061
ADAM9 ADAM metallopeptidase domain 9 0.0186116
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 0.0185774
SEC24D SEC24 family member D 0.0184809
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0184609
PJA2 praja ring finger 2, E3 ubiquitin protein ligase 0.0181588
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0180903
HMGB2 high mobility group box 2 0.0180258

decreased expression

Symbol Name Standardized Value
NALF1 NALCN channel auxiliary factor 1 -0.111816
PRKG1 protein kinase, cGMP-dependent, type I -0.0957009
COL1A1 collagen, type I, alpha 1 -0.0818561
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.071136
HMGA2 high mobility group AT-hook 2 -0.0701125
PAPPA pregnancy-associated plasma protein A, pappalysin 1 -0.0592076
PDE3A phosphodiesterase 3A, cGMP-inhibited -0.0518437
ADAMTS12 ADAM metallopeptidase with thrombospondin type 1 motif, 12 -0.0510578
ADGRB3 adhesion G protein-coupled receptor B3 -0.0463277
COL1A2 collagen, type I, alpha 2 -0.0366795
COL6A1 collagen, type VI, alpha 1 -0.0351779
MYO10 myosin X -0.0347117
VCL vinculin -0.0346618
AKAP12 A kinase (PRKA) anchor protein 12 -0.0333373
TMSB10 thymosin beta 10 -0.0319702
OXR1 oxidation resistance 1 -0.0307503
COL6A3 collagen, type VI, alpha 3 -0.0290838
COL6A2 collagen, type VI, alpha 2 -0.0285821
NAV1 neuron navigator 1 -0.0270803
ASPH aspartate beta-hydroxylase -0.0269152
GLIS3 GLIS family zinc finger 3 -0.0266021
CDH13 cadherin 13 -0.0262696
FRMD4A FERM domain containing 4A -0.0244639
KIAA1549L KIAA1549-like -0.0239557
PRRX1 paired related homeobox 1 -0.0238087
EGFR epidermal growth factor receptor -0.0232869
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0232177
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A -0.0211342
FBN1 fibrillin 1 -0.0210798
INTS6 integrator complex subunit 6 -0.0199575
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0199113
MAML3 mastermind-like 3 (Drosophila) -0.0196497
SAMD3 sterile alpha motif domain containing 3 -0.0196314
EXT1 exostosin glycosyltransferase 1 -0.0195576
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0191587
ABI3BP ABI family, member 3 (NESH) binding protein -0.0189988
CLMP CXADR-like membrane protein -0.0188979
TIMP2 TIMP metallopeptidase inhibitor 2 -0.0188842
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0187771
DIAPH2 diaphanous-related formin 2 -0.0187594
NCKAP5 NCK-associated protein 5 -0.0186619
TPT1 tumor protein, translationally-controlled 1 -0.0185972
EFCAB13 EF-hand calcium binding domain 13 -0.0185464
PDLIM5 PDZ and LIM domain 5 -0.0180317
CEMIP cell migration inducing protein, hyaluronan binding -0.017973
SLC8A1 solute carrier family 8 (sodium/calcium exchanger), member 1 -0.0179445
TMEM158 transmembrane protein 158 (gene/pseudogene) -0.017847
ARHGAP22 Rho GTPase activating protein 22 -0.0177043
RAI14 retinoic acid induced 14 -0.0175018
CDK6 cyclin-dependent kinase 6 -0.0169043
CUX1 cut-like homeobox 1 -0.016745
GREM1 gremlin 1, DAN family BMP antagonist -0.0165727
TIMP1 TIMP metallopeptidase inhibitor 1 -0.0165095
DGKI diacylglycerol kinase, iota -0.0162752
ACTG1 actin gamma 1 -0.0161273
NREP neuronal regeneration related protein -0.0159285
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.015819
SYNE1 spectrin repeat containing, nuclear envelope 1 -0.0151378
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0150294
RPL31 ribosomal protein L31 -0.0149542
MMP1 matrix metallopeptidase 1 -0.0147224
PSD3 pleckstrin and Sec7 domain containing 3 -0.014702
IGF2 insulin-like growth factor 2 -0.0141117
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.014061
RAD51B RAD51 paralog B -0.0139924
PRSS23 protease, serine, 23 -0.0139577
COL5A1 collagen, type V, alpha 1 -0.0136801
SLIT2 slit homolog 2 (Drosophila) -0.0135654
AEBP2 AE binding protein 2 -0.0134231
ENO2 enolase 2 (gamma, neuronal) -0.0133951
VCAN versican -0.0133804
TTC23L tetratricopeptide repeat domain 23-like -0.0133473
EMP1 epithelial membrane protein 1 -0.0133336
FRMPD4 FERM and PDZ domain containing 4 -0.0127648
WNT2B wingless-type MMTV integration site family, member 2B -0.0126016
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 -0.0125262
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) -0.012487
HLA-B major histocompatibility complex, class I, B -0.0124363
EGR1 early growth response 1 -0.0123186
CCND1 cyclin D1 -0.0122615
DTNA dystrobrevin, alpha -0.0120943
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae) -0.0117321
CCDC102B coiled-coil domain containing 102B -0.0116329
AFF3 AF4/FMR2 family, member 3 -0.0115159
CCDC91 coiled-coil domain containing 91 -0.0109873
ITPR1 inositol 1,4,5-trisphosphate receptor, type 1 -0.0109584
LYST lysosomal trafficking regulator -0.0108008
IPO9 importin 9 -0.0107822
MICAL2 microtubule associated monooxygenase, calponin and LIM domain containing 2 -0.010763
BRIP1 BRCA1 interacting protein C-terminal helicase 1 -0.0106728
FTL ferritin, light polypeptide -0.0105607
CA12 carbonic anhydrase XII -0.0104869
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0104439
ATG7 autophagy related 7 -0.0104023
UBE2E2 ubiquitin-conjugating enzyme E2E 2 -0.0103871
SLCO1C1 solute carrier organic anion transporter family, member 1C1 -0.0103692
TGFBI transforming growth factor, beta-induced, 68kDa -0.010302
ZBTB20 zinc finger and BTB domain containing 20 -0.0101582
COL3A1 collagen, type III, alpha 1 -0.0101116
MYO1E myosin IE -0.0100011