Rutin (trihydrate)_A-427 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Rutin (trihydrate) perturbation in A-427 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Rutin (trihydrate)_A-427 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
AREG amphiregulin 0.198921
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.194665
VIM vimentin 0.134417
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.092984
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0907832
PCBP2 poly(rC) binding protein 2 0.0864069
EGLN1 egl-9 family hypoxia-inducible factor 1 0.0857117
ERRFI1 ERBB receptor feedback inhibitor 1 0.0826151
KDM3A lysine (K)-specific demethylase 3A 0.0765696
TXNRD1 thioredoxin reductase 1 0.0717805
EEF2 eukaryotic translation elongation factor 2 0.0701156
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0629068
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.062379
XPO1 exportin 1 0.0615673
NEK7 NIMA-related kinase 7 0.0558459
BIRC6 baculoviral IAP repeat containing 6 0.0523739
MGAT4C MGAT4 family, member C 0.0520127
CHD1 chromodomain helicase DNA binding protein 1 0.0512036
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0509821
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0500119
NDUFV2 NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa 0.0497154
ATP11A ATPase, class VI, type 11A 0.0488976
WDR43 WD repeat domain 43 0.0481325
BIRC3 baculoviral IAP repeat containing 3 0.0471499
PDK4 pyruvate dehydrogenase kinase, isozyme 4 0.0462698
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0449055
FXR1 fragile X mental retardation, autosomal homolog 1 0.0441752
RPL7 ribosomal protein L7 0.0441545
YBX1 Y box binding protein 1 0.0432614
MED13L mediator complex subunit 13-like 0.0423415
IPO7 importin 7 0.039534
KIF5B kinesin family member 5B 0.0394222
USP34 ubiquitin specific peptidase 34 0.0391827
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0391315
ZNF292 zinc finger protein 292 0.0389837
CCNL1 cyclin L1 0.0384783
OGA O-GlcNAcase 0.0384686
STARD4 StAR-related lipid transfer (START) domain containing 4 0.0383848
MATR3 matrin 3 0.0381618
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0379809
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0378565
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0375169
PUM2 pumilio RNA-binding family member 2 0.0371229
EEF1G eukaryotic translation elongation factor 1 gamma 0.0366708
CLTC clathrin, heavy chain (Hc) 0.0363978
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.036343
THOC1 THO complex 1 0.0362481
RBM39 RNA binding motif protein 39 0.0360476
AXIN2 axin 2 0.0354796
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0353363
CXADR coxsackie virus and adenovirus receptor 0.0352918
GASK1B golgi associated kinase 1B 0.0349588
PDE4B phosphodiesterase 4B, cAMP-specific 0.0348287
ETNK1 ethanolamine kinase 1 0.0347728
RPL11 ribosomal protein L11 0.0344701
SLC38A2 solute carrier family 38, member 2 0.0341019
EPHA6 EPH receptor A6 0.0340439
ADAM17 ADAM metallopeptidase domain 17 0.0330785
ATP5F1B ATP synthase F1 subunit beta 0.0330045
PREPL prolyl endopeptidase-like 0.0326788
SPAG9 sperm associated antigen 9 0.0323257
ANXA1 annexin A1 0.0322327
TNPO1 transportin 1 0.0318955
NCKAP1 NCK-associated protein 1 0.0318314
DST dystonin 0.0315045
CPOX coproporphyrinogen oxidase 0.0308095
NCOR1 nuclear receptor corepressor 1 0.0307351
TPM3 tropomyosin 3 0.0306436
PSMD2 proteasome (prosome, macropain) 26S subunit, non-ATPase, 2 0.0304573
MARCHF6 membrane associated ring-CH-type finger 6 0.0300352
KDM6A lysine (K)-specific demethylase 6A 0.0296494
VMP1 vacuole membrane protein 1 0.029096
RPL19 ribosomal protein L19 0.0288099
LMO7 LIM domain 7 0.0287488
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0287129
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0285845
TMEM41B transmembrane protein 41B 0.0283033
EIF1 eukaryotic translation initiation factor 1 0.0282842
RB1CC1 RB1-inducible coiled-coil 1 0.0282479
CRISPLD1 cysteine-rich secretory protein LCCL domain containing 1 0.028029
RPS12 ribosomal protein S12 0.0280041
RPL3 ribosomal protein L3 0.0279459
PRRC2C proline-rich coiled-coil 2C 0.0279022
RACK1 receptor for activated C kinase 1 0.0278539
IL6ST interleukin 6 signal transducer 0.0278198
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0277605
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0276662
NUP58 nucleoporin 58 0.0274656
TBK1 TANK-binding kinase 1 0.0273679
PCNP PEST proteolytic signal containing nuclear protein 0.0272496
OXR1 oxidation resistance 1 0.0271805
ARL15 ADP-ribosylation factor-like 15 0.0271228
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0269169
PTGES3 prostaglandin E synthase 3 (cytosolic) 0.0268612
LDHA lactate dehydrogenase A 0.0268166
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.0267651
SREK1 splicing regulatory glutamine/lysine-rich protein 1 0.0266745
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0266252
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein 0.0265717
NAMPT nicotinamide phosphoribosyltransferase 0.026392

decreased expression

Symbol Name Standardized Value
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.127844
NLGN1 neuroligin 1 -0.11419
HMGA2 high mobility group AT-hook 2 -0.103054
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0645695
EHBP1 EH domain binding protein 1 -0.0592807
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.05642
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0558791
PCDH7 protocadherin 7 -0.0538888
TMSB10 thymosin beta 10 -0.0467617
RASAL2 RAS protein activator like 2 -0.0460842
ACTG1 actin gamma 1 -0.045027
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0420274
ZNF804A zinc finger protein 804A -0.0415359
INTS6 integrator complex subunit 6 -0.0398473
RAB7A RAB7A, member RAS oncogene family -0.0371762
RIMS2 regulating synaptic membrane exocytosis 2 -0.036998
NABP1 nucleic acid binding protein 1 -0.0364711
EGR1 early growth response 1 -0.0335948
DLC1 DLC1 Rho GTPase activating protein -0.0333039
MSRB3 methionine sulfoxide reductase B3 -0.0327471
FTL ferritin, light polypeptide -0.0322636
ERC1 ELKS/RAB6-interacting/CAST family member 1 -0.0303407
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0301291
CUX1 cut-like homeobox 1 -0.0297714
NHSL1 NHS-like 1 -0.0297349
SYT1 synaptotagmin I -0.0297248
MMP12 matrix metallopeptidase 12 -0.0294933
NAV3 neuron navigator 3 -0.027911
NEBL nebulette -0.0272352
PRIM2 primase, DNA, polypeptide 2 (58kDa) -0.0260172
VTI1A vesicle transport through interaction with t-SNAREs 1A -0.0259869
MARCHF4 membrane associated ring-CH-type finger 4 -0.0257013
CSMD3 CUB and Sushi multiple domains 3 -0.0256529
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0253487
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0246271
ETV6 ets variant 6 -0.0246255
PCDH9 protocadherin 9 -0.0244555
CANX calnexin -0.0238303
IFIH1 interferon induced with helicase C domain 1 -0.0237443
AHNAK AHNAK nucleoprotein -0.0231666
PHACTR4 phosphatase and actin regulator 4 -0.0225407
JMJD1C jumonji domain containing 1C -0.0222771
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.0218529
MKI67 marker of proliferation Ki-67 -0.0218479
DNAH14 dynein, axonemal, heavy chain 14 -0.0215804
PRH1 proline-rich protein HaeIII subfamily 1 -0.0215352
SETX senataxin -0.0214751
HSPB1 heat shock 27kDa protein 1 -0.0211044
EXOC4 exocyst complex component 4 -0.0209331
RSU1 Ras suppressor protein 1 -0.0207405
DENND5B DENN/MADD domain containing 5B -0.0206308
TBCA tubulin folding cofactor A -0.0206169
UBE2E2 ubiquitin-conjugating enzyme E2E 2 -0.0205582
L3MBTL4 l(3)mbt-like 4 (Drosophila) -0.0205077
LOC102724023 ES1 protein homolog, mitochondrial -0.0203826
CCSER1 coiled-coil serine-rich protein 1 -0.0198131
LRRC23 leucine rich repeat containing 23 -0.0193757
PMEPA1 prostate transmembrane protein, androgen induced 1 -0.0193756
THSD4 thrombospondin, type I, domain containing 4 -0.0192088
LPP LIM domain containing preferred translocation partner in lipoma -0.0191998
TM4SF1 transmembrane 4 L six family member 1 -0.0191183
LRRTM4 leucine rich repeat transmembrane neuronal 4 -0.0185779
ASXL1 additional sex combs like transcriptional regulator 1 -0.0183061
PDGFC platelet derived growth factor C -0.0180842
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 -0.0175691
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0174488
RABGAP1L RAB GTPase activating protein 1-like -0.0170713
R3HDM2 R3H domain containing 2 -0.0169767
KSR2 kinase suppressor of ras 2 -0.016913
CCND1 cyclin D1 -0.016681
FAM193A family with sequence similarity 193, member A -0.016481
AHRR aryl-hydrocarbon receptor repressor -0.0162514
ITGBL1 integrin, beta-like 1 (with EGF-like repeat domains) -0.0162151
CEP112 centrosomal protein 112kDa -0.0161785
FAF1 Fas (TNFRSF6) associated factor 1 -0.0160323
CAVIN1 caveolae associated protein 1 -0.0160094
ADIPOR2 adiponectin receptor 2 -0.0159939
BMPR1B bone morphogenetic protein receptor, type IB -0.0159184
LIMS1 LIM and senescent cell antigen-like domains 1 -0.0158731
ZNF609 zinc finger protein 609 -0.0156994
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0154694
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.015252
DOCK1 dedicator of cytokinesis 1 -0.0152323
BPTF bromodomain PHD finger transcription factor -0.0152092
CRK v-crk avian sarcoma virus CT10 oncogene homolog -0.0150958
AKAP12 A kinase (PRKA) anchor protein 12 -0.0150155
ZMYM4 zinc finger, MYM-type 4 -0.0149491
ATG7 autophagy related 7 -0.0148737
PCF11 PCF11 cleavage and polyadenylation factor subunit -0.0147208
PBX3 pre-B-cell leukemia homeobox 3 -0.0146787
PARD3B par-3 family cell polarity regulator beta -0.014654
TRAF3 TNF receptor-associated factor 3 -0.0146063
MAP1B microtubule-associated protein 1B -0.014484
BNC2 basonuclin 2 -0.0144719
LRMDA leucine rich melanocyte differentiation associated -0.0144271
AK1 adenylate kinase 1 -0.0143909
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0143803
RPL31 ribosomal protein L31 -0.0143555
BCHE butyrylcholinesterase -0.0143428
MAP4 microtubule-associated protein 4 -0.0143421