Rutin (trihydrate)_RKO Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Rutin (trihydrate) perturbation in RKO cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Rutin (trihydrate)_RKO drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.14854
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0997891
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0961361
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0896389
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0874463
RPL7 ribosomal protein L7 0.0824353
LAMB3 laminin, beta 3 0.0799611
KDM3A lysine (K)-specific demethylase 3A 0.0790813
PTK2 protein tyrosine kinase 2 0.0772184
STC1 stanniocalcin 1 0.075618
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0748312
ZFAND3 zinc finger, AN1-type domain 3 0.0732858
ELL2 elongation factor, RNA polymerase II, 2 0.0732206
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0722233
EEF2 eukaryotic translation elongation factor 2 0.0713948
CORO1C coronin, actin binding protein, 1C 0.0710294
KDM6A lysine (K)-specific demethylase 6A 0.0696537
MCL1 myeloid cell leukemia 1 0.0683332
PGK1 phosphoglycerate kinase 1 0.0677229
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0675723
MYH9 myosin, heavy chain 9, non-muscle 0.0669702
OGA O-GlcNAcase 0.0661258
FMNL2 formin-like 2 0.0652029
TRIO trio Rho guanine nucleotide exchange factor 0.0646504
ZEB1 zinc finger E-box binding homeobox 1 0.0635449
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0624578
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0619188
UBA6 ubiquitin-like modifier activating enzyme 6 0.0613948
USP3 ubiquitin specific peptidase 3 0.0567945
KMT2C lysine (K)-specific methyltransferase 2C 0.0563362
RAD21 RAD21 homolog (S. pombe) 0.0558035
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0556079
NUP58 nucleoporin 58 0.055229
ATP13A3 ATPase type 13A3 0.0535559
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0532005
TPD52 tumor protein D52 0.0528824
RBM39 RNA binding motif protein 39 0.0527366
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0518053
ZNF292 zinc finger protein 292 0.0516783
MACF1 microtubule-actin crosslinking factor 1 0.0516757
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0509277
GOLGA4 golgin A4 0.0494429
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0494017
TM9SF3 transmembrane 9 superfamily member 3 0.0491512
PRRC2B proline-rich coiled-coil 2B 0.0490043
NCKAP1 NCK-associated protein 1 0.048957
WAC WW domain containing adaptor with coiled-coil 0.0468396
PRRC2C proline-rich coiled-coil 2C 0.0466092
PSME4 proteasome (prosome, macropain) activator subunit 4 0.0462919
FNDC3B fibronectin type III domain containing 3B 0.0462313
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0459622
FLNA filamin A, alpha 0.0457989
PSMD2 proteasome (prosome, macropain) 26S subunit, non-ATPase, 2 0.0457723
BHLHE40 basic helix-loop-helix family, member e40 0.0456469
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0453901
BBX bobby sox homolog (Drosophila) 0.0446619
ADAM9 ADAM metallopeptidase domain 9 0.0441871
XPO1 exportin 1 0.044127
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0440258
MKLN1 muskelin 1, intracellular mediator containing kelch motifs 0.0439161
APP amyloid beta (A4) precursor protein 0.043476
TSC22D2 TSC22 domain family, member 2 0.0434594
SBF2 SET binding factor 2 0.0431423
ENO1 enolase 1, (alpha) 0.0424386
TRPC4AP transient receptor potential cation channel, subfamily C, member 4 associated protein 0.0424066
SRPK2 SRSF protein kinase 2 0.0422755
RLF rearranged L-myc fusion 0.0418662
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0415514
PARD3 par-3 family cell polarity regulator 0.0414139
RASA2 RAS p21 protein activator 2 0.0412313
BIRC6 baculoviral IAP repeat containing 6 0.0404713
KDM5C lysine (K)-specific demethylase 5C 0.0403209
ADAM17 ADAM metallopeptidase domain 17 0.0401209
ABI1 abl-interactor 1 0.0400861
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0399683
HNRNPD heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) 0.0397637
FLNB filamin B, beta 0.0396911
AGO2 argonaute RISC catalytic component 2 0.0395129
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0394095
WDR43 WD repeat domain 43 0.0393876
PICALM phosphatidylinositol binding clathrin assembly protein 0.0393415
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0392287
PUM2 pumilio RNA-binding family member 2 0.0391494
NDRG1 N-myc downstream regulated 1 0.0378372
USP34 ubiquitin specific peptidase 34 0.0377188
CAPRIN2 caprin family member 2 0.0373168
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0372812
USP9X ubiquitin specific peptidase 9, X-linked 0.0370063
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0363969
CTNND1 catenin (cadherin-associated protein), delta 1 0.0363327
CANX calnexin 0.0363024
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0362529
RBM33 RNA binding motif protein 33 0.0358524
CLTC clathrin, heavy chain (Hc) 0.0351494
RAD23B RAD23 homolog B (S. cerevisiae) 0.034991
ZC3H11A zinc finger CCCH-type containing 11A 0.0347574
PCBP2 poly(rC) binding protein 2 0.0347367
RAB1A RAB1A, member RAS oncogene family 0.0344982
ANO6 anoctamin 6 0.0344118
CELF1 CUGBP, Elav-like family member 1 0.0341305

decreased expression

Symbol Name Standardized Value
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.12959
ZNF438 zinc finger protein 438 -0.0847313
FRMD6 FERM domain containing 6 -0.0638613
NABP1 nucleic acid binding protein 1 -0.0567333
HMGA2 high mobility group AT-hook 2 -0.0518247
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0428297
POTEF POTE ankyrin domain family, member F -0.0411396
MT2A metallothionein 2A -0.0410486
ARHGAP22 Rho GTPase activating protein 22 -0.0363877
NAV3 neuron navigator 3 -0.0325014
EGR1 early growth response 1 -0.0322872
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0276856
INTS6 integrator complex subunit 6 -0.0273868
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.0245196
PTPRG protein tyrosine phosphatase, receptor type, G -0.0235787
FTL ferritin, light polypeptide -0.0232682
GLRX glutaredoxin (thioltransferase) -0.0225558
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.022046
WNT2B wingless-type MMTV integration site family, member 2B -0.0215855
RACK1 receptor for activated C kinase 1 -0.0212704
RPS6 ribosomal protein S6 -0.0208049
SP100 SP100 nuclear antigen -0.0193411
IFI16 interferon, gamma-inducible protein 16 -0.0182455
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0180775
CCAR1 cell division cycle and apoptosis regulator 1 -0.0177285
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0171203
MSH4 mutS homolog 4 -0.0166725
MYRFL myelin regulatory factor-like -0.0164882
MTAP methylthioadenosine phosphorylase -0.0159548
BLZF1 basic leucine zipper nuclear factor 1 -0.0158924
PFN1 profilin 1 -0.0158886
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0158334
TIMP1 TIMP metallopeptidase inhibitor 1 -0.0154818
PLSCR1 phospholipid scramblase 1 -0.0153938
CCDC91 coiled-coil domain containing 91 -0.0152177
TRAPPC9 trafficking protein particle complex 9 -0.0151857
GNB2 guanine nucleotide binding protein (G protein), beta polypeptide 2 -0.0151595
SHANK1 SH3 and multiple ankyrin repeat domains 1 -0.0150034
ACTG1 actin gamma 1 -0.0150018
RBM25 RNA binding motif protein 25 -0.0144863
LRRC69 leucine rich repeat containing 69 -0.0140968
KDSR 3-ketodihydrosphingosine reductase -0.0139729
ANK2 ankyrin 2, neuronal -0.0138017
CCDC138 coiled-coil domain containing 138 -0.013702
WSB1 WD repeat and SOCS box containing 1 -0.0136685
MX2 MX dynamin-like GTPase 2 -0.0135952
SURF4 surfeit 4 -0.0135785
TIAM2 T-cell lymphoma invasion and metastasis 2 -0.0133848
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0130191
ERCC1 excision repair cross-complementation group 1 -0.0127856
UGGT2 UDP-glucose glycoprotein glucosyltransferase 2 -0.0125987
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.0124593
TBCA tubulin folding cofactor A -0.0124219
S100A11 S100 calcium binding protein A11 -0.0122492
TMEM165 transmembrane protein 165 -0.0121176
SHISA5 shisa family member 5 -0.0120836
PKP4 plakophilin 4 -0.0120663
MTHFD2L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like -0.0120186
ESF1 ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae) -0.0120172
PHF14 PHD finger protein 14 -0.0120043
EIF2S2 eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa -0.0118496
TRPS1 trichorhinophalangeal syndrome I -0.011814
GFPT2 glutamine-fructose-6-phosphate transaminase 2 -0.0117247
RALGAPA1 Ral GTPase activating protein, alpha subunit 1 (catalytic) -0.0116982
AEBP2 AE binding protein 2 -0.0116901
NAA15 N(alpha)-acetyltransferase 15, NatA auxiliary subunit -0.0116578
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 -0.0115757
FKBP15 FK506 binding protein 15, 133kDa -0.011516
CWC27 CWC27 spliceosome-associated protein homolog (S. cerevisiae) -0.0114884
LRCH3 leucine-rich repeats and calponin homology (CH) domain containing 3 -0.0114146
STAU2 staufen double-stranded RNA binding protein 2 -0.0112981
KTN1 kinectin 1 (kinesin receptor) -0.0112959
ZMYM4 zinc finger, MYM-type 4 -0.0112518
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae) -0.0111357
ZNF91 zinc finger protein 91 -0.0111352
SGMS2 sphingomyelin synthase 2 -0.0111326
KRR1 KRR1, small subunit (SSU) processome component, homolog (yeast) -0.0110851
CCDC18 coiled-coil domain containing 18 -0.011042
SLC41A1 solute carrier family 41 (magnesium transporter), member 1 -0.0109774
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.010897
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0107928
ATP6V0C ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c -0.0106298
LIMCH1 LIM and calponin homology domains 1 -0.0105373
FOXP1 forkhead box P1 -0.0104577
RGS5 regulator of G-protein signaling 5 -0.0104423
TUBA1B tubulin, alpha 1b -0.0103927
MIPOL1 mirror-image polydactyly 1 -0.010361
ARHGAP31 Rho GTPase activating protein 31 -0.010338
HNF4G hepatocyte nuclear factor 4, gamma -0.0102359
ATP5F1B ATP synthase F1 subunit beta -0.010231
LTBP3 latent transforming growth factor beta binding protein 3 -0.0101564
RBBP6 retinoblastoma binding protein 6 -0.0101273
TRMT11 tRNA methyltransferase 11 homolog (S. cerevisiae) -0.0100757
TCF12 transcription factor 12 -0.0100722
RPLP1 ribosomal protein, large, P1 -0.0100608
IL7 interleukin 7 -0.0100601
R3HDM1 R3H domain containing 1 -0.0100499
CFAP54 cilia and flagella associated 54 -0.0100449
PPP1R10 protein phosphatase 1, regulatory subunit 10 -0.010042
S100A9 S100 calcium binding protein A9 -0.00986085