Rutin (trihydrate)_SK-MEL-2 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Rutin (trihydrate) perturbation in SK-MEL-2 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Rutin (trihydrate)_SK-MEL-2 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FNDC3B fibronectin type III domain containing 3B 0.163069
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.143328
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.108221
LSAMP limbic system-associated membrane protein 0.105337
NRG3 neuregulin 3 0.102037
MSI2 musashi RNA-binding protein 2 0.0933888
SLC39A11 solute carrier family 39, member 11 0.0863533
MSN moesin 0.0842061
FLNA filamin A, alpha 0.0787817
SPTBN1 spectrin, beta, non-erythrocytic 1 0.072316
SPAG9 sperm associated antigen 9 0.071181
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0689693
NLGN1 neuroligin 1 0.065943
SEPTIN9 septin 9 0.063483
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 0.062598
PLEC plectin 0.0615122
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0574788
SREBF2 sterol regulatory element binding transcription factor 2 0.0570764
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.0555839
SETD5 SET domain containing 5 0.0552168
RAD51B RAD51 paralog B 0.0546202
ZFAND3 zinc finger, AN1-type domain 3 0.0529821
MYH9 myosin, heavy chain 9, non-muscle 0.0525879
KMT2E lysine (K)-specific methyltransferase 2E 0.0518493
DST dystonin 0.0503935
FMNL2 formin-like 2 0.0500451
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 0.0497528
FLNB filamin B, beta 0.049323
NOTCH2 notch 2 0.0485976
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0470321
BBX bobby sox homolog (Drosophila) 0.0466935
DIP2C DIP2 disco-interacting protein 2 homolog C (Drosophila) 0.0460016
KMT2C lysine (K)-specific methyltransferase 2C 0.045342
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.0447552
ENO1 enolase 1, (alpha) 0.0446293
ADAM17 ADAM metallopeptidase domain 17 0.044577
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0442402
PTK2 protein tyrosine kinase 2 0.0439429
TPM3 tropomyosin 3 0.0432159
PTPRM protein tyrosine phosphatase, receptor type, M 0.0424475
PRELID2 PRELI domain containing 2 0.0422669
NAV2 neuron navigator 2 0.0411457
EGLN1 egl-9 family hypoxia-inducible factor 1 0.0409057
LINGO2 leucine rich repeat and Ig domain containing 2 0.0408865
KLF7 Kruppel-like factor 7 (ubiquitous) 0.040654
SBF2 SET binding factor 2 0.0403289
CABIN1 calcineurin binding protein 1 0.0397418
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0393905
XPO1 exportin 1 0.0390663
CTTN cortactin 0.038971
BHLHE40 basic helix-loop-helix family, member e40 0.0383684
OGA O-GlcNAcase 0.0383236
GALNT2 polypeptide N-acetylgalactosaminyltransferase 2 0.0382609
SOD2 superoxide dismutase 2, mitochondrial 0.0380556
SOX10 SRY (sex determining region Y)-box 10 0.0377384
CLIP4 CAP-GLY domain containing linker protein family, member 4 0.0376779
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0368902
TFG TRK-fused gene 0.036866
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0365774
MEF2A myocyte enhancer factor 2A 0.0363116
CHD1 chromodomain helicase DNA binding protein 1 0.0359454
CFAP20DC CFAP20 domain containing 0.0357699
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0357067
PCBP2 poly(rC) binding protein 2 0.0355103
HELZ helicase with zinc finger 0.0353283
RPL3 ribosomal protein L3 0.0352058
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0349541
FRMD4A FERM domain containing 4A 0.034882
CHST11 carbohydrate (chondroitin 4) sulfotransferase 11 0.0348274
LDHA lactate dehydrogenase A 0.0348117
YEATS2 YEATS domain containing 2 0.0346729
ZNF292 zinc finger protein 292 0.0346235
DIAPH1 diaphanous-related formin 1 0.0346216
CTBP2 C-terminal binding protein 2 0.0345972
CSDE1 cold shock domain containing E1, RNA-binding 0.0345498
TNIP1 TNFAIP3 interacting protein 1 0.0344936
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0341557
CNIH3 cornichon family AMPA receptor auxiliary protein 3 0.033598
IGFN1 immunoglobulin-like and fibronectin type III domain containing 1 0.0332705
NFE2L1 nuclear factor, erythroid 2-like 1 0.0332516
ANKRD11 ankyrin repeat domain 11 0.0330757
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0325515
LAMP2 lysosomal-associated membrane protein 2 0.0322905
GNAI3 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 0.0322535
TNNC1 troponin C type 1 (slow) 0.0321266
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0319561
LRMDA leucine rich melanocyte differentiation associated 0.0319509
ANGPTL4 angiopoietin-like 4 0.0317798
ESYT2 extended synaptotagmin-like protein 2 0.0317214
CD109 CD109 molecule 0.0314503
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0309615
ACTN4 actinin, alpha 4 0.0302074
ICAM1 intercellular adhesion molecule 1 0.0300005
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0299922
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0299223
FYN FYN proto-oncogene, Src family tyrosine kinase 0.0297992
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0295467
ATXN1 ataxin 1 0.0294114
USP3 ubiquitin specific peptidase 3 0.028974
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0289252

decreased expression

Symbol Name Standardized Value
MT2A metallothionein 2A -0.093354
FMN1 formin 1 -0.0846583
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0834638
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0834132
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0596892
RPS3 ribosomal protein S3 -0.0547321
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0529247
RPLP1 ribosomal protein, large, P1 -0.0472501
FTL ferritin, light polypeptide -0.0463699
ANKRD1 ankyrin repeat domain 1 (cardiac muscle) -0.04421
RPS6 ribosomal protein S6 -0.0395411
ACTG1 actin gamma 1 -0.0395195
TPT1 tumor protein, translationally-controlled 1 -0.0334009
TM4SF1 transmembrane 4 L six family member 1 -0.0314619
VDAC1 voltage-dependent anion channel 1 -0.0313637
MT1X metallothionein 1X -0.0309641
RPL35A ribosomal protein L35a -0.0290336
FRMD5 FERM domain containing 5 -0.0278571
RASAL2 RAS protein activator like 2 -0.0274243
TMSB10 thymosin beta 10 -0.026872
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0262095
PCNX4 pecanex 4 -0.0261484
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.02542
EIF1 eukaryotic translation initiation factor 1 -0.0243036
TP63 tumor protein p63 -0.0236259
RPL38 ribosomal protein L38 -0.023505
RPS8 ribosomal protein S8 -0.0218791
RPLP2 ribosomal protein, large, P2 -0.0213122
RPL32 ribosomal protein L32 -0.0213051
RPL34 ribosomal protein L34 -0.0207989
RACK1 receptor for activated C kinase 1 -0.0204277
RPS13 ribosomal protein S13 -0.0199298
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0192072
LINC02798 long intergenic non-protein coding RNA 2798 -0.0184603
WNT2B wingless-type MMTV integration site family, member 2B -0.018279
APOD apolipoprotein D -0.0180472
RPL12 ribosomal protein L12 -0.017909
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0177877
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 -0.0177248
RPL31 ribosomal protein L31 -0.0170627
RPL5 ribosomal protein L5 -0.0168471
TFPI2 tissue factor pathway inhibitor 2 -0.0168255
HLA-B major histocompatibility complex, class I, B -0.016623
RPS21 ribosomal protein S21 -0.0165768
TPTEP2-CSNK1E TPTEP2-CSNK1E readthrough -0.0164765
RPL37A ribosomal protein L37a -0.0162455
RSL1D1 ribosomal L1 domain containing 1 -0.0160568
ERBIN erbb2 interacting protein -0.0158463
IER3 immediate early response 3 -0.0158435
BDP1 B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB -0.0157328
EPG5 ectopic P-granules autophagy protein 5 homolog (C. elegans) -0.0156024
RPS29 ribosomal protein S29 -0.0154702
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0154537
CCND1 cyclin D1 -0.0153915
RBBP6 retinoblastoma binding protein 6 -0.0153602
RPL36A ribosomal protein L36a -0.0152675
TXNRD1 thioredoxin reductase 1 -0.0152069
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0151701
RPS24 ribosomal protein S24 -0.0150944
DUSP6 dual specificity phosphatase 6 -0.0150775
RPL36 ribosomal protein L36 -0.0149201
ASTN2 astrotactin 2 -0.0148336
RPL9 ribosomal protein L9 -0.0146896
DNAH14 dynein, axonemal, heavy chain 14 -0.0145793
GCC2 GRIP and coiled-coil domain containing 2 -0.0144271
EGR1 early growth response 1 -0.0143039
RHOBTB3 Rho-related BTB domain containing 3 -0.0142862
BICD1 bicaudal D homolog 1 (Drosophila) -0.0141442
SSR3 signal sequence receptor, gamma (translocon-associated protein gamma) -0.014129
LMAN1 lectin, mannose-binding, 1 -0.0140665
NRXN3 neurexin 3 -0.0140349
RPL28 ribosomal protein L28 -0.0140264
CDK6 cyclin-dependent kinase 6 -0.0139489
TBCA tubulin folding cofactor A -0.0139037
RPS19 ribosomal protein S19 -0.0138413
KLF6 Kruppel-like factor 6 -0.0136877
GNL3 guanine nucleotide binding protein-like 3 (nucleolar) -0.0136692
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0132623
EIF2S2 eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa -0.0130998
WSB1 WD repeat and SOCS box containing 1 -0.0128331
CD63 CD63 molecule -0.0128158
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0127947
SCLT1 sodium channel and clathrin linker 1 -0.0127137
S100A9 S100 calcium binding protein A9 -0.0126601
FAM222B family with sequence similarity 222, member B -0.01251
FBXO32 F-box protein 32 -0.0124812
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0124492
ULK4 unc-51 like kinase 4 -0.0124004
PRKACB protein kinase, cAMP-dependent, catalytic, beta -0.012234
CD96 CD96 molecule -0.0121832
CMTM7 CKLF-like MARVEL transmembrane domain containing 7 -0.0120457
ANKRD28 ankyrin repeat domain 28 -0.01202
CEMIP2 cell migration inducing hyaluronidase 2 -0.0120046
SNX24 sorting nexin 24 -0.0119507
TNPO1 transportin 1 -0.0118236
ATXN2 ataxin 2 -0.0116947
FSTL5 follistatin-like 5 -0.0116921
PHACTR4 phosphatase and actin regulator 4 -0.0116863
PTTG1 pituitary tumor-transforming 1 -0.0116259
SKP1 S-phase kinase-associated protein 1 -0.011621