S-Adenosyl-L-methionine (disulfate tosylate)_HepG2/C3A Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description S-Adenosyl-L-methionine (disulfate tosylate) perturbation in HepG2/C3A cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the S-Adenosyl-L-methionine (disulfate tosylate)_HepG2/C3A drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
IGF2 insulin-like growth factor 2 0.143418
AKAP12 A kinase (PRKA) anchor protein 12 0.0924994
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0750001
SAMD4A sterile alpha motif domain containing 4A 0.0530009
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0494827
ATXN1 ataxin 1 0.0429988
ASPH aspartate beta-hydroxylase 0.0429445
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0425385
GMDS GDP-mannose 4,6-dehydratase 0.0391956
FRMD5 FERM domain containing 5 0.0331362
RNF213 ring finger protein 213 0.0287868
TNS1 tensin 1 0.0283785
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0279641
DTNA dystrobrevin, alpha 0.0273537
PDLIM5 PDZ and LIM domain 5 0.0272692
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0252037
EHBP1 EH domain binding protein 1 0.0249816
GK glycerol kinase 0.0238712
ATP10A ATPase, class V, type 10A 0.0229848
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) 0.0226574
INTS6 integrator complex subunit 6 0.02236
KIAA1217 KIAA1217 0.0219861
GRB10 growth factor receptor-bound protein 10 0.0217669
FAM107B family with sequence similarity 107, member B 0.0208861
TRIO trio Rho guanine nucleotide exchange factor 0.0207158
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0206944
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0200553
CHST15 carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15 0.0200524
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0198672
SLC41A2 solute carrier family 41 (magnesium transporter), member 2 0.0198006
ERN1 endoplasmic reticulum to nucleus signaling 1 0.0187476
HPCAL1 hippocalcin-like 1 0.0186415
CANX calnexin 0.0178758
SPSB1 splA/ryanodine receptor domain and SOCS box containing 1 0.0175154
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0172267
KDM3A lysine (K)-specific demethylase 3A 0.0168876
FAM13A family with sequence similarity 13, member A 0.0167073
RIGI RNA sensor RIG-I 0.0163774
HOOK2 hook microtubule-tethering protein 2 0.0162218
GCLC glutamate-cysteine ligase, catalytic subunit 0.0161278
FMNL2 formin-like 2 0.0157799
NPAS2 neuronal PAS domain protein 2 0.0153347
LPP LIM domain containing preferred translocation partner in lipoma 0.0151738
FUS FUS RNA binding protein 0.0151096
ZBTB20 zinc finger and BTB domain containing 20 0.0150523
KDM4B lysine (K)-specific demethylase 4B 0.0148851
ZHX2 zinc fingers and homeoboxes 2 0.0148395
NDRG1 N-myc downstream regulated 1 0.0145132
RERE arginine-glutamic acid dipeptide (RE) repeats 0.014474
COL7A1 collagen, type VII, alpha 1 0.0142165
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like 0.0140079
MAP2K1 mitogen-activated protein kinase kinase 1 0.0138282
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae) 0.0138018
CCNY cyclin Y 0.0137193
INSIG2 insulin induced gene 2 0.0137031
KYNU kynureninase 0.0135572
SLC9A1 solute carrier family 9, subfamily A (NHE1, cation proton antiporter 1), member 1 0.0134918
PCCA propionyl CoA carboxylase, alpha polypeptide 0.013453
HDAC4 histone deacetylase 4 0.0134155
PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2 0.0134084
HSPH1 heat shock 105kDa/110kDa protein 1 0.0128874
SP100 SP100 nuclear antigen 0.0127235
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0126558
MYO1B myosin IB 0.0126004
KDM4C lysine (K)-specific demethylase 4C 0.0125051
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.0123973
IARS1 isoleucyl-tRNA synthetase 1 0.0123305
PTPRG protein tyrosine phosphatase, receptor type, G 0.0122573
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0120866
FBXO42 F-box protein 42 0.0119686
DUSP16 dual specificity phosphatase 16 0.0119557
HOMER1 homer scaffolding protein 1 0.0119001
ADARB1 adenosine deaminase, RNA-specific, B1 0.0118666
SQSTM1 sequestosome 1 0.0118573
SND1 staphylococcal nuclease and tudor domain containing 1 0.0118135
EXT1 exostosin glycosyltransferase 1 0.0117922
PLXDC2 plexin domain containing 2 0.0117282
TTC28 tetratricopeptide repeat domain 28 0.0115692
HM13 histocompatibility (minor) 13 0.011524
USP37 ubiquitin specific peptidase 37 0.0114979
PLEC plectin 0.0114794
NABP1 nucleic acid binding protein 1 0.0113653
NGLY1 N-glycanase 1 0.0113385
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 0.0113318
RSRP1 arginine/serine-rich protein 1 0.0113109
FAM219A family with sequence similarity 219, member A 0.0112949
MYO6 myosin VI 0.0112343
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0111188
RAD51B RAD51 paralog B 0.011058
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 0.0110131
ARHGAP21 Rho GTPase activating protein 21 0.01096
ZFAND3 zinc finger, AN1-type domain 3 0.0107475
IQSEC1 IQ motif and Sec7 domain 1 0.0106199
PGM3 phosphoglucomutase 3 0.0106002
TRMT11 tRNA methyltransferase 11 homolog (S. cerevisiae) 0.0105511
SEC31A SEC31 homolog A (S. cerevisiae) 0.0104822
ATP2A2 ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 0.0103984
SHB Src homology 2 domain containing adaptor protein B 0.0103734
HERPUD1 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 0.0103141
MACF1 microtubule-actin crosslinking factor 1 0.0102832

decreased expression

Symbol Name Standardized Value
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 -0.565054
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.251851
C3 complement component 3 -0.193164
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 -0.168713
APOB apolipoprotein B -0.143569
MT2A metallothionein 2A -0.116739
TIMP1 TIMP metallopeptidase inhibitor 1 -0.100671
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0830991
FN1 fibronectin 1 -0.0771104
GPC3 glypican 3 -0.0737663
RPS6 ribosomal protein S6 -0.066164
SLC38A2 solute carrier family 38, member 2 -0.0631078
RPS12 ribosomal protein S12 -0.0616531
FTL ferritin, light polypeptide -0.0578096
RPL11 ribosomal protein L11 -0.0543221
ENO1 enolase 1, (alpha) -0.0516268
NKD1 naked cuticle homolog 1 (Drosophila) -0.0462913
TF transferrin -0.0450042
ELL2 elongation factor, RNA polymerase II, 2 -0.0440637
RPL37A ribosomal protein L37a -0.04256
RPS19 ribosomal protein S19 -0.0414122
RPS8 ribosomal protein S8 -0.040922
GPAM glycerol-3-phosphate acyltransferase, mitochondrial -0.0406947
FBF1 Fas (TNFRSF6) binding factor 1 -0.0380097
RPLP1 ribosomal protein, large, P1 -0.0379519
RPS3 ribosomal protein S3 -0.0371554
TRIM26 tripartite motif containing 26 -0.0358396
RPL12 ribosomal protein L12 -0.0342949
TPT1 tumor protein, translationally-controlled 1 -0.0336331
CPE carboxypeptidase E -0.033302
RPL31 ribosomal protein L31 -0.0329778
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.0325223
DSPP dentin sialophosphoprotein -0.032212
IGFBP1 insulin-like growth factor binding protein 1 -0.031781
CCL20 chemokine (C-C motif) ligand 20 -0.0316149
RPLP0 ribosomal protein, large, P0 -0.0311184
MAN1A1 mannosidase, alpha, class 1A, member 1 -0.0310649
VPS54 vacuolar protein sorting 54 homolog (S. cerevisiae) -0.0302693
DLC1 DLC1 Rho GTPase activating protein -0.0300645
RPL35A ribosomal protein L35a -0.0299519
TMSB10 thymosin beta 10 -0.0297077
APOE apolipoprotein E -0.0291887
CFB complement factor B -0.029062
RPL26 ribosomal protein L26 -0.0286981
RACK1 receptor for activated C kinase 1 -0.0284678
RPS24 ribosomal protein S24 -0.0278198
EML4 echinoderm microtubule associated protein like 4 -0.0276575
TM4SF1 transmembrane 4 L six family member 1 -0.0274956
ACSL4 acyl-CoA synthetase long-chain family member 4 -0.0274039
EGR1 early growth response 1 -0.0272264
ARHGAP9 Rho GTPase activating protein 9 -0.0271793
LOC112694756 uncharaterized LOC112694756 -0.0266101
RPL34 ribosomal protein L34 -0.0264807
RPS27A ribosomal protein S27a -0.0262378
RPL23 ribosomal protein L23 -0.0258978
RPS14 ribosomal protein S14 -0.0254933
ATP1A4 ATPase, Na+/K+ transporting, alpha 4 polypeptide -0.0254675
APOA1 apolipoprotein A-I -0.0253972
A2M alpha-2-macroglobulin -0.0249893
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.024828
RPLP2 ribosomal protein, large, P2 -0.0246983
LMCD1 LIM and cysteine-rich domains 1 -0.0245821
LYZ lysozyme -0.0245373
RPS23 ribosomal protein S23 -0.0241824
B2M beta-2-microglobulin -0.0239886
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0237419
MBNL3 muscleblind-like splicing regulator 3 -0.023362
RALGAPA2 Ral GTPase activating protein, alpha subunit 2 (catalytic) -0.0233311
ITIH2 inter-alpha-trypsin inhibitor heavy chain 2 -0.0228363
AHSG alpha-2-HS-glycoprotein -0.0227494
PTBP3 polypyrimidine tract binding protein 3 -0.0226884
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.022495
APOA2 apolipoprotein A-II -0.0223565
APLP2 amyloid beta (A4) precursor-like protein 2 -0.0223396
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.022213
RPS17 ribosomal protein S17 -0.0219925
GDF15 growth differentiation factor 15 -0.0217343
RPL5 ribosomal protein L5 -0.0213668
RPS13 ribosomal protein S13 -0.021051
PERP PERP, TP53 apoptosis effector -0.0209258
RPL37 ribosomal protein L37 -0.0209017
RPS5 ribosomal protein S5 -0.0207078
ITGAV integrin, alpha V -0.0206985
FTH1 ferritin, heavy polypeptide 1 -0.0206873
PTCHD4 patched domain containing 4 -0.0206161
KIF5B kinesin family member 5B -0.0205973
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.020533
TGFBR2 transforming growth factor, beta receptor II (70/80kDa) -0.0204336
RTN4 reticulon 4 -0.0203727
MALT1 MALT1 paracaspase -0.0203344
LRRTM4 leucine rich repeat transmembrane neuronal 4 -0.0203188
PRRC2C proline-rich coiled-coil 2C -0.0202902
RPL9 ribosomal protein L9 -0.0201929
RPL32 ribosomal protein L32 -0.0201287
SLC6A14 solute carrier family 6 (amino acid transporter), member 14 -0.0199919
AMBP alpha-1-microglobulin/bikunin precursor -0.0197988
RBM25 RNA binding motif protein 25 -0.0195649
PAWR PRKC, apoptosis, WT1, regulator -0.019338
KTN1 kinectin 1 (kinesin receptor) -0.0191875
PCBP2 poly(rC) binding protein 2 -0.0191492