S-Adenosyl-L-methionine (disulfate tosylate)_NCI-H23 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description S-Adenosyl-L-methionine (disulfate tosylate) perturbation in NCI-H23 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the S-Adenosyl-L-methionine (disulfate tosylate)_NCI-H23 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PABPC1 poly(A) binding protein, cytoplasmic 1 0.146955
TXNRD1 thioredoxin reductase 1 0.136249
TFPI2 tissue factor pathway inhibitor 2 0.0645539
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0629773
OGA O-GlcNAcase 0.0545776
EEF2 eukaryotic translation elongation factor 2 0.0482742
KPNA4 karyopherin alpha 4 (importin alpha 3) 0.0421702
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0420019
RTN4 reticulon 4 0.0405627
PHIP pleckstrin homology domain interacting protein 0.0392676
XPO1 exportin 1 0.0368443
MARCHF4 membrane associated ring-CH-type finger 4 0.035325
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0328761
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0317926
KDM3A lysine (K)-specific demethylase 3A 0.0317324
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0308298
ADAM17 ADAM metallopeptidase domain 17 0.0300836
CAPZA1 capping protein (actin filament) muscle Z-line, alpha 1 0.0300409
NCAPD2 non-SMC condensin I complex, subunit D2 0.0288404
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0275285
KHDC4 KH domain containing 4, pre-mRNA splicing factor 0.0273509
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0271278
RUSC2 RUN and SH3 domain containing 2 0.0262368
KMT2E lysine (K)-specific methyltransferase 2E 0.0259212
PCBP2 poly(rC) binding protein 2 0.0257275
ERBIN erbb2 interacting protein 0.0249255
IPO7 importin 7 0.0248529
SPAG9 sperm associated antigen 9 0.024402
FUS FUS RNA binding protein 0.024335
NUP153 nucleoporin 153kDa 0.0243205
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0240043
CSDE1 cold shock domain containing E1, RNA-binding 0.0235473
SINHCAF SIN3-HDAC complex associated factor 0.0230079
CLTC clathrin, heavy chain (Hc) 0.0229609
USP9X ubiquitin specific peptidase 9, X-linked 0.022882
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0227851
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0224439
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0224207
PTGES3 prostaglandin E synthase 3 (cytosolic) 0.0221783
CTTN cortactin 0.0216185
TRIO trio Rho guanine nucleotide exchange factor 0.0215771
PPFIA1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 0.0215356
STK4 serine/threonine kinase 4 0.020735
SMC4 structural maintenance of chromosomes 4 0.0205958
MIS18BP1 MIS18 binding protein 1 0.0205195
RB1CC1 RB1-inducible coiled-coil 1 0.0203958
VDAC1 voltage-dependent anion channel 1 0.0202426
NCKAP1 NCK-associated protein 1 0.0202326
NIPBL Nipped-B homolog (Drosophila) 0.0201842
RRM2 ribonucleotide reductase M2 0.0201457
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 0.0200574
TJP1 tight junction protein 1 0.0197641
ACTR2 ARP2 actin-related protein 2 homolog (yeast) 0.0196111
MATR3 matrin 3 0.0195909
UBE2H ubiquitin-conjugating enzyme E2H 0.0192371
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 0.0191931
PCNX1 pecanex 1 0.019114
EIF4B eukaryotic translation initiation factor 4B 0.0190472
SPRED2 sprouty-related, EVH1 domain containing 2 0.0189264
YES1 YES proto-oncogene 1, Src family tyrosine kinase 0.0188424
PGK1 phosphoglycerate kinase 1 0.0188182
PPM1L protein phosphatase, Mg2+/Mn2+ dependent, 1L 0.0187315
ADAM9 ADAM metallopeptidase domain 9 0.0186728
MARCHF6 membrane associated ring-CH-type finger 6 0.0186331
RAD21 RAD21 homolog (S. pombe) 0.0182385
HSPA8 heat shock 70kDa protein 8 0.0182167
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0181594
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0180969
UBE2D3 ubiquitin-conjugating enzyme E2D 3 0.0180953
GPHN gephyrin 0.0180816
CSE1L CSE1 chromosome segregation 1-like (yeast) 0.0180625
SNRNP200 small nuclear ribonucleoprotein 200kDa (U5) 0.0179291
ATAD2 ATPase family, AAA domain containing 2 0.0178614
PLCB4 phospholipase C, beta 4 0.0178005
SRPK2 SRSF protein kinase 2 0.0177312
TFG TRK-fused gene 0.0176213
MKI67 marker of proliferation Ki-67 0.0175609
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa 0.0175458
UBC ubiquitin C 0.017378
SEPTIN2 septin 2 0.0173032
RNF145 ring finger protein 145 0.0170735
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0169909
CHD1 chromodomain helicase DNA binding protein 1 0.016867
CCNT1 cyclin T1 0.016784
ZFAND3 zinc finger, AN1-type domain 3 0.016686
PER1 period circadian clock 1 0.0166703
PLEC plectin 0.0164907
ADAR adenosine deaminase, RNA-specific 0.0164109
TMPO thymopoietin 0.0163712
ZNFX1 zinc finger, NFX1-type containing 1 0.0162811
PPME1 protein phosphatase methylesterase 1 0.0161588
ETV3 ets variant 3 0.016152
ESYT2 extended synaptotagmin-like protein 2 0.0161469
ARID2 AT rich interactive domain 2 (ARID, RFX-like) 0.0161017
NEK7 NIMA-related kinase 7 0.0160637
PPP3R1 protein phosphatase 3, regulatory subunit B, alpha 0.016048
PIP5K1A phosphatidylinositol-4-phosphate 5-kinase, type I, alpha 0.0159371
RLF rearranged L-myc fusion 0.0159247
ZFC3H1 zinc finger, C3H1-type containing 0.0158883
WNK1 WNK lysine deficient protein kinase 1 0.0158708

decreased expression

Symbol Name Standardized Value
AKAP12 A kinase (PRKA) anchor protein 12 -0.403035
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.19225
THSD4 thrombospondin, type I, domain containing 4 -0.102339
YBX3 Y box binding protein 3 -0.0996219
TMSB10 thymosin beta 10 -0.0952839
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.093715
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0914298
RAD51B RAD51 paralog B -0.0859135
AFF3 AF4/FMR2 family, member 3 -0.0857982
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0763151
HMGA2 high mobility group AT-hook 2 -0.0746562
ATXN1 ataxin 1 -0.0738915
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0681328
OSMR oncostatin M receptor -0.0665331
PDE10A phosphodiesterase 10A -0.0653626
TAS2R14 taste receptor, type 2, member 14 -0.0631704
RPS3 ribosomal protein S3 -0.0631149
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0628632
HLA-B major histocompatibility complex, class I, B -0.0623509
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0617903
PDE4D phosphodiesterase 4D, cAMP-specific -0.0617085
IFI6 interferon, alpha-inducible protein 6 -0.0606675
MT2A metallothionein 2A -0.0593945
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0584041
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0575794
PRH1 proline-rich protein HaeIII subfamily 1 -0.055386
SHANK2 SH3 and multiple ankyrin repeat domains 2 -0.0530386
PTMA prothymosin, alpha -0.0510359
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0497565
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0489987
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0483701
POTEF POTE ankyrin domain family, member F -0.0482657
EGFR epidermal growth factor receptor -0.0479222
RIMS2 regulating synaptic membrane exocytosis 2 -0.0477291
RPL37A ribosomal protein L37a -0.0475103
ATRX alpha thalassemia/mental retardation syndrome X-linked -0.0469012
RYR3 ryanodine receptor 3 -0.0465797
DOCK5 dedicator of cytokinesis 5 -0.0457609
ERC1 ELKS/RAB6-interacting/CAST family member 1 -0.0448881
ZBTB20 zinc finger and BTB domain containing 20 -0.0445088
EXOC4 exocyst complex component 4 -0.0443847
MCL1 myeloid cell leukemia 1 -0.0442501
FNDC3B fibronectin type III domain containing 3B -0.0412725
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0404698
RNF213 ring finger protein 213 -0.0400506
RPL37 ribosomal protein L37 -0.0394138
ACTG1 actin gamma 1 -0.0384429
RABGAP1L RAB GTPase activating protein 1-like -0.0375739
AEBP2 AE binding protein 2 -0.0371847
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0358967
PYGL phosphorylase, glycogen, liver -0.0355633
FMNL2 formin-like 2 -0.0354983
NF1 neurofibromin 1 -0.034911
TPT1 tumor protein, translationally-controlled 1 -0.0343312
GRAMD1B GRAM domain containing 1B -0.0340878
EHBP1 EH domain binding protein 1 -0.0340326
MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2 -0.0337827
CUX1 cut-like homeobox 1 -0.0336143
RPS19 ribosomal protein S19 -0.0336053
CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 -0.0333874
WWOX WW domain containing oxidoreductase -0.0329769
DENND5B DENN/MADD domain containing 5B -0.0328398
RPS12 ribosomal protein S12 -0.0325847
ATG7 autophagy related 7 -0.0325722
TPM2 tropomyosin 2 (beta) -0.0324829
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0319664
VCL vinculin -0.0317565
FTH1 ferritin, heavy polypeptide 1 -0.03151
NLGN1 neuroligin 1 -0.0314623
NCOA7 nuclear receptor coactivator 7 -0.0314071
DIAPH2 diaphanous-related formin 2 -0.0313684
LOXL2 lysyl oxidase-like 2 -0.0313075
CCDC91 coiled-coil domain containing 91 -0.0311526
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0307854
RERE arginine-glutamic acid dipeptide (RE) repeats -0.0304742
BABAM2 BRISC and BRCA1 A complex member 2 -0.0303757
PTK2 protein tyrosine kinase 2 -0.0298407
MBD5 methyl-CpG binding domain protein 5 -0.0292004
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) -0.0291059
BASP1 brain abundant, membrane attached signal protein 1 -0.0291003
VIM vimentin -0.0290809
USP34 ubiquitin specific peptidase 34 -0.0288192
SVIL supervillin -0.0285372
PRELID2 PRELI domain containing 2 -0.0281606
MACF1 microtubule-actin crosslinking factor 1 -0.0281318
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae) -0.0278854
RSF1 remodeling and spacing factor 1 -0.0275028
EGR1 early growth response 1 -0.0272747
RPL26 ribosomal protein L26 -0.0272053
CACNA2D1 calcium channel, voltage-dependent, alpha 2/delta subunit 1 -0.0269422
PATJ PATJ crumbs cell polarity complex component -0.0267857
RPL36 ribosomal protein L36 -0.0267425
CACNA1A calcium channel, voltage-dependent, P/Q type, alpha 1A subunit -0.0265943
TRIM9 tripartite motif containing 9 -0.0265157
ADARB2 adenosine deaminase, RNA-specific, B2 (non-functional) -0.0264495
IGF2 insulin-like growth factor 2 -0.0264185
EPAS1 endothelial PAS domain protein 1 -0.0262652
RPL31 ribosomal protein L31 -0.0261491
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) -0.0258027
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0256941