S-Adenosyl-L-methionine (disulfate tosylate)_SK-MEL-2 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description S-Adenosyl-L-methionine (disulfate tosylate) perturbation in SK-MEL-2 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the S-Adenosyl-L-methionine (disulfate tosylate)_SK-MEL-2 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.116527
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0575918
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0483443
TXNRD1 thioredoxin reductase 1 0.0384324
NAV2 neuron navigator 2 0.0375632
MYH9 myosin, heavy chain 9, non-muscle 0.0356798
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0305851
CD44 CD44 molecule (Indian blood group) 0.0286387
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0283568
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0270682
HSPA8 heat shock 70kDa protein 8 0.0267389
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0244945
FLNA filamin A, alpha 0.0242369
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0229864
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0228513
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0227706
ANKRD1 ankyrin repeat domain 1 (cardiac muscle) 0.022316
ELL2 elongation factor, RNA polymerase II, 2 0.022303
MSN moesin 0.0213953
ATP13A3 ATPase type 13A3 0.0209984
AFDN afadin, adherens junction formation factor 0.0209139
EMP1 epithelial membrane protein 1 0.0208088
TPM3 tropomyosin 3 0.0204343
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.0202611
IGFN1 immunoglobulin-like and fibronectin type III domain containing 1 0.0201105
PLEC plectin 0.0197917
AHNAK AHNAK nucleoprotein 0.0195241
RASAL2 RAS protein activator like 2 0.0195149
ICAM1 intercellular adhesion molecule 1 0.0194727
MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2 0.0189391
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0188331
FAM219A family with sequence similarity 219, member A 0.0182918
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0181663
CEP128 centrosomal protein 128kDa 0.0177652
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0173998
DOCK5 dedicator of cytokinesis 5 0.0171748
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0169904
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.01695
PEAK1 pseudopodium-enriched atypical kinase 1 0.0168933
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.016598
LRRTM4 leucine rich repeat transmembrane neuronal 4 0.016503
PCBP3 poly(rC) binding protein 3 0.0164411
PSME4 proteasome (prosome, macropain) activator subunit 4 0.0160073
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0159397
HOOK2 hook microtubule-tethering protein 2 0.0159381
XRCC6 X-ray repair complementing defective repair in Chinese hamster cells 6 0.0158042
CORO1C coronin, actin binding protein, 1C 0.0156815
RANGAP1 Ran GTPase activating protein 1 0.015575
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.0152868
MCL1 myeloid cell leukemia 1 0.0150163
TLN1 talin 1 0.0147285
EXT1 exostosin glycosyltransferase 1 0.0147007
EPG5 ectopic P-granules autophagy protein 5 homolog (C. elegans) 0.0146591
ATXN1 ataxin 1 0.0145877
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0143649
OSBPL8 oxysterol binding protein-like 8 0.0142924
EIF4A2 eukaryotic translation initiation factor 4A2 0.0141853
CENPF centromere protein F, 350/400kDa 0.0139926
ATF6 activating transcription factor 6 0.0138594
DIAPH1 diaphanous-related formin 1 0.0138061
RPL3 ribosomal protein L3 0.0136626
ANLN anillin, actin binding protein 0.0134875
INTS6 integrator complex subunit 6 0.0134816
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0134471
HIPK1 homeodomain interacting protein kinase 1 0.0130578
STK4 serine/threonine kinase 4 0.0129769
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0129574
NCOA3 nuclear receptor coactivator 3 0.0126028
SEL1L sel-1 suppressor of lin-12-like (C. elegans) 0.012509
RAPGEF6 Rap guanine nucleotide exchange factor (GEF) 6 0.0124473
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.0123671
SPIRE1 spire-type actin nucleation factor 1 0.0122651
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0122397
SETX senataxin 0.0122122
AKAP13 A kinase (PRKA) anchor protein 13 0.0121806
KIF1B kinesin family member 1B 0.0121755
NIBAN2 niban apoptosis regulator 2 0.0121267
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0120873
UGGT2 UDP-glucose glycoprotein glucosyltransferase 2 0.0120376
SFPQ splicing factor proline/glutamine-rich 0.0120331
LAMP2 lysosomal-associated membrane protein 2 0.0119621
ZNF800 zinc finger protein 800 0.0118287
BRIP1 BRCA1 interacting protein C-terminal helicase 1 0.0118123
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.011589
BCKDHB branched chain keto acid dehydrogenase E1, beta polypeptide 0.0115138
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) 0.0114391
AMOTL1 angiomotin like 1 0.0113278
RPS6KA2 ribosomal protein S6 kinase, 90kDa, polypeptide 2 0.0111787
RCC1 regulator of chromosome condensation 1 0.0111621
RASA2 RAS p21 protein activator 2 0.0111254
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0110958
FRYL FRY-like 0.0110259
STARD13 StAR-related lipid transfer (START) domain containing 13 0.0110185
GMDS GDP-mannose 4,6-dehydratase 0.0109801
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 0.0109591
NAV1 neuron navigator 1 0.0109173
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0108307
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 0.0107806
CTNNBL1 catenin, beta like 1 0.0107414
USP9X ubiquitin specific peptidase 9, X-linked 0.0107259

decreased expression

Symbol Name Standardized Value
VIM vimentin -0.244209
FN1 fibronectin 1 -0.216816
LSAMP limbic system-associated membrane protein -0.206845
NRG3 neuregulin 3 -0.185177
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.15535
FNDC3B fibronectin type III domain containing 3B -0.125954
NLGN1 neuroligin 1 -0.122375
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.103822
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0789398
CHST11 carbohydrate (chondroitin 4) sulfotransferase 11 -0.0692769
FRMD4A FERM domain containing 4A -0.0689127
FHIT fragile histidine triad -0.0679676
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0647129
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0647124
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 -0.0618899
VDAC1 voltage-dependent anion channel 1 -0.0596776
MSI2 musashi RNA-binding protein 2 -0.0593729
RPL35A ribosomal protein L35a -0.0554856
FTL ferritin, light polypeptide -0.054237
TMSB10 thymosin beta 10 -0.053922
CADM1 cell adhesion molecule 1 -0.0530683
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 -0.0524257
SLC39A11 solute carrier family 39, member 11 -0.0509594
PTMA prothymosin, alpha -0.0502492
GOLGA4 golgin A4 -0.0477678
SREBF2 sterol regulatory element binding transcription factor 2 -0.046073
FMNL2 formin-like 2 -0.0445884
PMEL premelanosome protein -0.0436073
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.043313
TNNC1 troponin C type 1 (slow) -0.0415587
MAML3 mastermind-like 3 (Drosophila) -0.0407851
ZBTB20 zinc finger and BTB domain containing 20 -0.0406336
INPP5F inositol polyphosphate-5-phosphatase F -0.0400593
KPNB1 karyopherin (importin) beta 1 -0.0392227
KDM5B lysine (K)-specific demethylase 5B -0.0384388
MT2A metallothionein 2A -0.0383682
LDHA lactate dehydrogenase A -0.0378798
IGFBP3 insulin-like growth factor binding protein 3 -0.0377827
RPS6 ribosomal protein S6 -0.0367906
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0356067
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0349891
LINGO2 leucine rich repeat and Ig domain containing 2 -0.0341679
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0339335
IL1RAP interleukin 1 receptor accessory protein -0.0338533
SBF2 SET binding factor 2 -0.0338533
AKT3 v-akt murine thymoma viral oncogene homolog 3 -0.0332656
RAB7A RAB7A, member RAS oncogene family -0.0332495
SETD5 SET domain containing 5 -0.0330771
HMGA1 high mobility group AT-hook 1 -0.0328359
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) -0.0326616
CNKSR3 CNKSR family member 3 -0.0316619
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0315755
RPS3 ribosomal protein S3 -0.0310741
JMJD1C jumonji domain containing 1C -0.0309694
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0306075
APOD apolipoprotein D -0.0305884
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.0305604
LITAF lipopolysaccharide-induced TNF factor -0.0303477
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0302046
PRAME preferentially expressed antigen in melanoma -0.0299992
IFI16 interferon, gamma-inducible protein 16 -0.0287856
NF1 neurofibromin 1 -0.0287178
MT1X metallothionein 1X -0.0286921
EHBP1 EH domain binding protein 1 -0.0284908
RPLP1 ribosomal protein, large, P1 -0.0282743
WDR45B WD repeat domain 45B -0.028259
ZMYND8 zinc finger, MYND-type containing 8 -0.0281657
CNIH3 cornichon family AMPA receptor auxiliary protein 3 -0.0277053
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 -0.0267806
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 -0.0267135
SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 -0.0264637
SQSTM1 sequestosome 1 -0.0264352
CBX3 chromobox homolog 3 -0.0260244
HIBADH 3-hydroxyisobutyrate dehydrogenase -0.0257581
IGF1R insulin-like growth factor 1 receptor -0.025716
FRMD5 FERM domain containing 5 -0.0257157
LOC112694756 uncharaterized LOC112694756 -0.0255792
RAD51B RAD51 paralog B -0.025555
LEF1 lymphoid enhancer-binding factor 1 -0.0252227
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0251973
RPL34 ribosomal protein L34 -0.0250025
WSB1 WD repeat and SOCS box containing 1 -0.0248422
TPI1 triosephosphate isomerase 1 -0.024702
DOCK7 dedicator of cytokinesis 7 -0.0246655
RNF145 ring finger protein 145 -0.0245209
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0240132
MAML2 mastermind-like 2 (Drosophila) -0.0238703
ARHGEF11 Rho guanine nucleotide exchange factor (GEF) 11 -0.0237596
HILPDA hypoxia inducible lipid droplet-associated -0.0235704
ZCCHC7 zinc finger, CCHC domain containing 7 -0.023482
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.023477
RNF19A ring finger protein 19A, RBR E3 ubiquitin protein ligase -0.0233522
S100A6 S100 calcium binding protein A6 -0.0232968
ACTG1 actin gamma 1 -0.0231401
BCAS3 breast carcinoma amplified sequence 3 -0.0229868
MEF2A myocyte enhancer factor 2A -0.0229364
ANKRD28 ankyrin repeat domain 28 -0.0229267
PNISR PNN-interacting serine/arginine-rich protein -0.0229023
DLGAP1 discs, large (Drosophila) homolog-associated protein 1 -0.0228532
CDK6 cyclin-dependent kinase 6 -0.0227719