S-Adenosyl-L-methionine (disulfate tosylate)_SW 900 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description S-Adenosyl-L-methionine (disulfate tosylate) perturbation in SW 900 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the S-Adenosyl-L-methionine (disulfate tosylate)_SW 900 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
VCL vinculin 0.070263
MYH9 myosin, heavy chain 9, non-muscle 0.0481626
NTN4 netrin 4 0.0444772
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0410345
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0400297
SPRED2 sprouty-related, EVH1 domain containing 2 0.0385377
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0375619
FLNA filamin A, alpha 0.0370349
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0368373
TOP1 topoisomerase (DNA) I 0.0344568
SEPTIN9 septin 9 0.033866
NRIP1 nuclear receptor interacting protein 1 0.0321057
CORO1C coronin, actin binding protein, 1C 0.0314063
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0303451
PELO pelota homolog (Drosophila) 0.0293676
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0282671
SMAD3 SMAD family member 3 0.0282327
WDR1 WD repeat domain 1 0.02809
PLEC plectin 0.0261242
STAT1 signal transducer and activator of transcription 1, 91kDa 0.025921
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.0255192
PDLIM5 PDZ and LIM domain 5 0.0251889
TUFT1 tuftelin 1 0.0248396
PALLD palladin, cytoskeletal associated protein 0.0246453
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0227382
RIGI RNA sensor RIG-I 0.0224301
ACTN4 actinin, alpha 4 0.0213918
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0209654
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.0209562
NALF1 NALCN channel auxiliary factor 1 0.0203402
RUNX1 runt-related transcription factor 1 0.0202024
WWTR1 WW domain containing transcription regulator 1 0.0200693
USP12 ubiquitin specific peptidase 12 0.0196154
FHL2 four and a half LIM domains 2 0.0190519
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0190283
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 0.018939
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0186464
INTS6 integrator complex subunit 6 0.0183876
ACTR3 ARP3 actin-related protein 3 homolog (yeast) 0.0183524
PHC2 polyhomeotic homolog 2 (Drosophila) 0.0182546
SPSB1 splA/ryanodine receptor domain and SOCS box containing 1 0.0181117
BICD1 bicaudal D homolog 1 (Drosophila) 0.0178916
ATXN1 ataxin 1 0.0176292
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0175086
NPAS2 neuronal PAS domain protein 2 0.0174697
SPRED1 sprouty-related, EVH1 domain containing 1 0.0171591
DUSP16 dual specificity phosphatase 16 0.0170976
RNF213 ring finger protein 213 0.0170161
KIAA1217 KIAA1217 0.0168464
IL6ST interleukin 6 signal transducer 0.0167671
TSC22D2 TSC22 domain family, member 2 0.0167333
ACTN1 actinin, alpha 1 0.0166478
NXN nucleoredoxin 0.0166457
TJP1 tight junction protein 1 0.0165595
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0164756
FAT1 FAT atypical cadherin 1 0.0163425
MLPH melanophilin 0.0160272
WDR26 WD repeat domain 26 0.0157262
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0156833
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.0155811
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0154933
HSPA8 heat shock 70kDa protein 8 0.0154418
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0153359
MYO10 myosin X 0.0153152
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 0.0153114
SHB Src homology 2 domain containing adaptor protein B 0.0151901
CPEB2 cytoplasmic polyadenylation element binding protein 2 0.0151224
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0149687
RFFL ring finger and FYVE-like domain containing E3 ubiquitin protein ligase 0.0149362
AHNAK AHNAK nucleoprotein 0.0146163
YAP1 Yes-associated protein 1 0.0145694
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0144558
UBASH3B ubiquitin associated and SH3 domain containing B 0.0143559
TUSC3 tumor suppressor candidate 3 0.0143141
TRA2A transformer 2 alpha homolog (Drosophila) 0.0138922
LTBP1 latent transforming growth factor beta binding protein 1 0.0137907
ANLN anillin, actin binding protein 0.013773
RALY RALY heterogeneous nuclear ribonucleoprotein 0.0137067
AGO2 argonaute RISC catalytic component 2 0.0136816
NPTN neuroplastin 0.0136763
STK24 serine/threonine kinase 24 0.0132662
MSN moesin 0.0131909
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0131539
ABI1 abl-interactor 1 0.0131455
PMEPA1 prostate transmembrane protein, androgen induced 1 0.0130876
OGA O-GlcNAcase 0.0130785
TRA2B transformer 2 beta homolog (Drosophila) 0.0130639
ATP2C1 ATPase, Ca++ transporting, type 2C, member 1 0.0130627
IFI44 interferon-induced protein 44 0.0130472
SDC2 syndecan 2 0.0129804
SFPQ splicing factor proline/glutamine-rich 0.0128698
SEPTIN7 septin 7 0.0128036
XPO1 exportin 1 0.0126492
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0125764
LRMDA leucine rich melanocyte differentiation associated 0.0125728
JAG1 jagged 1 0.0125477
NCKAP1 NCK-associated protein 1 0.0123917
YBX3 Y box binding protein 3 0.0123813
CCNYL1 cyclin Y-like 1 0.0123224
KDM6A lysine (K)-specific demethylase 6A 0.012322

decreased expression

Symbol Name Standardized Value
FN1 fibronectin 1 -0.266774
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) -0.230731
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.187278
NRG1 neuregulin 1 -0.174181
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.138167
PTMA prothymosin, alpha -0.124265
P4HB prolyl 4-hydroxylase, beta polypeptide -0.122651
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.113115
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0992515
FTH1 ferritin, heavy polypeptide 1 -0.0899315
HMGA2 high mobility group AT-hook 2 -0.0878332
NDRG1 N-myc downstream regulated 1 -0.0813982
MRPS6 mitochondrial ribosomal protein S6 -0.0811232
RAI14 retinoic acid induced 14 -0.0805639
STC2 stanniocalcin 2 -0.0791802
TXNIP thioredoxin interacting protein -0.0759843
CANX calnexin -0.0751991
TMSB4X thymosin beta 4, X-linked -0.0751126
TMSB10 thymosin beta 10 -0.0749955
PLIN2 perilipin 2 -0.0747446
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0693244
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0685348
SQSTM1 sequestosome 1 -0.0668074
HLA-B major histocompatibility complex, class I, B -0.0651534
ENO2 enolase 2 (gamma, neuronal) -0.0638229
GLIS3 GLIS family zinc finger 3 -0.0633858
ITGA1 integrin, alpha 1 -0.0629974
S100A6 S100 calcium binding protein A6 -0.0600834
IFI27 interferon, alpha-inducible protein 27 -0.0591001
VIM vimentin -0.0588907
FTL ferritin, light polypeptide -0.0588617
TMEM165 transmembrane protein 165 -0.0570082
EFNA5 ephrin-A5 -0.0566593
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0563861
CALR calreticulin -0.0562032
ENO1 enolase 1, (alpha) -0.0560884
VEGFA vascular endothelial growth factor A -0.0538163
AKAP9 A kinase (PRKA) anchor protein 9 -0.052336
PKM pyruvate kinase, muscle -0.0522301
SFTPA2 surfactant protein A2 -0.0520258
TRIO trio Rho guanine nucleotide exchange factor -0.0518804
TPR translocated promoter region, nuclear basket protein -0.0494791
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0494272
B2M beta-2-microglobulin -0.048334
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0482278
LOC102724023 ES1 protein homolog, mitochondrial -0.0473515
LMNA lamin A/C -0.0469713
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.0464775
AKAP12 A kinase (PRKA) anchor protein 12 -0.0450615
SEC31A SEC31 homolog A (S. cerevisiae) -0.0446179
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0444194
LIMCH1 LIM and calponin homology domains 1 -0.043233
ZCCHC7 zinc finger, CCHC domain containing 7 -0.043209
FOS FBJ murine osteosarcoma viral oncogene homolog -0.0428775
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0428764
SOS1 son of sevenless homolog 1 (Drosophila) -0.0417046
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0409373
CD109 CD109 molecule -0.0405077
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0394374
PDE4D phosphodiesterase 4D, cAMP-specific -0.0350513
AHR aryl hydrocarbon receptor -0.0349245
PDIA3 protein disulfide isomerase family A, member 3 -0.034756
HILPDA hypoxia inducible lipid droplet-associated -0.0344445
SYT1 synaptotagmin I -0.0343476
ARHGAP35 Rho GTPase activating protein 35 -0.034055
TTC3 tetratricopeptide repeat domain 3 -0.0339778
BIRC6 baculoviral IAP repeat containing 6 -0.0337692
SOX4 SRY (sex determining region Y)-box 4 -0.0337429
LOC112694756 uncharaterized LOC112694756 -0.0332983
PGK1 phosphoglycerate kinase 1 -0.0327143
TNS3 tensin 3 -0.0324757
GLUL glutamate-ammonia ligase -0.032032
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0317181
NAMPT nicotinamide phosphoribosyltransferase -0.0316588
USP34 ubiquitin specific peptidase 34 -0.0314364
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0312587
GCC2 GRIP and coiled-coil domain containing 2 -0.0305509
GNPDA1 glucosamine-6-phosphate deaminase 1 -0.0303166
NFATC2 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 -0.0300009
RPS27 ribosomal protein S27 -0.0298326
ZMYND8 zinc finger, MYND-type containing 8 -0.0297729
ZBTB20 zinc finger and BTB domain containing 20 -0.0294621
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 -0.0289844
HMGA1 high mobility group AT-hook 1 -0.028827
HLA-A major histocompatibility complex, class I, A -0.028773
RFX2 regulatory factor X, 2 (influences HLA class II expression) -0.0287637
RND3 Rho family GTPase 3 -0.0287226
MBD5 methyl-CpG binding domain protein 5 -0.0283069
PRRC2C proline-rich coiled-coil 2C -0.0281757
SUCO SUN domain containing ossification factor -0.0280737
MYADM myeloid-associated differentiation marker -0.027862
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0276056
ACBD3 acyl-CoA binding domain containing 3 -0.0272904
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0271466
RUNX2 runt-related transcription factor 2 -0.027028
HDGF hepatoma-derived growth factor -0.0269948
TPI1 triosephosphate isomerase 1 -0.0269837
GOLGA4 golgin A4 -0.026623
PDIA6 protein disulfide isomerase family A, member 6 -0.026493
TFPI2 tissue factor pathway inhibitor 2 -0.0264556