SBI-0640756_A498 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description SBI-0640756 perturbation in A498 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the SBI-0640756_A498 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
TXNRD1 thioredoxin reductase 1 0.0794761
ASPH aspartate beta-hydroxylase 0.0540656
GLIS3 GLIS family zinc finger 3 0.0513169
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0470223
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0466667
IRS2 insulin receptor substrate 2 0.0464748
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0464466
CA12 carbonic anhydrase XII 0.0437832
PBX1 pre-B-cell leukemia homeobox 1 0.0430571
FTL ferritin, light polypeptide 0.0421359
MT2A metallothionein 2A 0.0414876
NAMPT nicotinamide phosphoribosyltransferase 0.0399106
GPC5 glypican 5 0.0398021
MGST1 microsomal glutathione S-transferase 1 0.0387243
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 0.0386396
CENPF centromere protein F, 350/400kDa 0.0384188
OSMR oncostatin M receptor 0.0364276
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0362152
CBX3 chromobox homolog 3 0.0345262
NRP1 neuropilin 1 0.0341496
DOCK5 dedicator of cytokinesis 5 0.0336935
TMSB10 thymosin beta 10 0.0326332
COL4A1 collagen, type IV, alpha 1 0.0311973
TSHZ2 teashirt zinc finger homeobox 2 0.031026
ETV6 ets variant 6 0.0309775
EHBP1 EH domain binding protein 1 0.0308527
ICAM1 intercellular adhesion molecule 1 0.0300718
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.029991
RPL4 ribosomal protein L4 0.0293853
RNF213 ring finger protein 213 0.0293462
EIF1 eukaryotic translation initiation factor 1 0.029345
CP ceruloplasmin (ferroxidase) 0.0291891
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0290615
MYH9 myosin, heavy chain 9, non-muscle 0.0290208
RDH10 retinol dehydrogenase 10 (all-trans) 0.0279425
VCL vinculin 0.0276995
RPL12 ribosomal protein L12 0.0265813
APOL1 apolipoprotein L, 1 0.0260201
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0259169
SMAD3 SMAD family member 3 0.0258716
NRP2 neuropilin 2 0.0254571
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0241887
FTH1 ferritin, heavy polypeptide 1 0.0241668
PARP4 poly (ADP-ribose) polymerase family, member 4 0.0234758
MKI67 marker of proliferation Ki-67 0.0228726
B2M beta-2-microglobulin 0.0226101
AFF1 AF4/FMR2 family, member 1 0.0225753
SRRM2 serine/arginine repetitive matrix 2 0.0225359
ACTN4 actinin, alpha 4 0.0223678
ADAM9 ADAM metallopeptidase domain 9 0.0220499
ZFP36L1 ZFP36 ring finger protein-like 1 0.0213372
PHLDB2 pleckstrin homology-like domain, family B, member 2 0.0212142
RPS2 ribosomal protein S2 0.0205982
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 0.0205734
RPL23 ribosomal protein L23 0.0205409
FBXL17 F-box and leucine-rich repeat protein 17 0.020293
EIF4H eukaryotic translation initiation factor 4H 0.02025
OXR1 oxidation resistance 1 0.0201977
JAK1 Janus kinase 1 0.0200367
BCL6 B-cell CLL/lymphoma 6 0.0199984
ZMYND8 zinc finger, MYND-type containing 8 0.0198725
IFITM3 interferon induced transmembrane protein 3 0.0194707
APP amyloid beta (A4) precursor protein 0.0189776
ANXA1 annexin A1 0.0189628
RBMS1 RNA binding motif, single stranded interacting protein 1 0.0189566
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 0.0189107
AHI1 Abelson helper integration site 1 0.0186533
NRIP1 nuclear receptor interacting protein 1 0.0185406
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0184791
TPI1 triosephosphate isomerase 1 0.018243
RPL13A ribosomal protein L13a 0.0179795
PFKP phosphofructokinase, platelet 0.0178439
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0176245
ACSL3 acyl-CoA synthetase long-chain family member 3 0.0175306
TGFB2 transforming growth factor, beta 2 0.0174255
HADHA hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit 0.0171787
SAA2 serum amyloid A2 0.0170129
FUS FUS RNA binding protein 0.0169395
CKAP4 cytoskeleton-associated protein 4 0.0169121
RPL35 ribosomal protein L35 0.0168548
SLC4A4 solute carrier family 4 (sodium bicarbonate cotransporter), member 4 0.0168264
LOC102724023 ES1 protein homolog, mitochondrial 0.0165599
RRBP1 ribosome binding protein 1 0.0165392
CNBP CCHC-type zinc finger, nucleic acid binding protein 0.0164053
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0162139
TMOD3 tropomodulin 3 (ubiquitous) 0.0161368
RPS19 ribosomal protein S19 0.0161256
DHRS3 dehydrogenase/reductase (SDR family) member 3 0.0161088
MYO9A myosin IXA 0.0160709
BICC1 BicC family RNA binding protein 1 0.0160464
RPS15A ribosomal protein S15a 0.0160124
HLA-C major histocompatibility complex, class I, C 0.0158713
ALDH1A1 aldehyde dehydrogenase 1 family, member A1 0.0158402
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0157828
NFE2L1 nuclear factor, erythroid 2-like 1 0.0156463
ITSN1 intersectin 1 (SH3 domain protein) 0.0156414
SKAP2 src kinase associated phosphoprotein 2 0.0155578
SRRM1 serine/arginine repetitive matrix 1 0.0154872
RPS3 ribosomal protein S3 0.0154775
MSH2 mutS homolog 2 0.0153697

decreased expression

Symbol Name Standardized Value
IGFBP3 insulin-like growth factor binding protein 3 -0.166575
CXCL8 chemokine (C-X-C motif) ligand 8 -0.126211
VIM vimentin -0.101983
GPC6 glypican 6 -0.101247
FRMD4A FERM domain containing 4A -0.0924935
TRIO trio Rho guanine nucleotide exchange factor -0.0924337
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0917321
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0867252
SOD2 superoxide dismutase 2, mitochondrial -0.0860952
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0845215
CADM1 cell adhesion molecule 1 -0.0707279
SPAG9 sperm associated antigen 9 -0.0698767
NDRG1 N-myc downstream regulated 1 -0.0689035
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0638588
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0608655
ZFAND3 zinc finger, AN1-type domain 3 -0.054813
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0546801
EXT1 exostosin glycosyltransferase 1 -0.0525418
COPA coatomer protein complex, subunit alpha -0.0510267
NAV2 neuron navigator 2 -0.050412
FMNL2 formin-like 2 -0.0503129
RAB1A RAB1A, member RAS oncogene family -0.0498147
COG5 component of oligomeric golgi complex 5 -0.0487685
IARS1 isoleucyl-tRNA synthetase 1 -0.0486014
SEC31A SEC31 homolog A (S. cerevisiae) -0.0483987
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 -0.044994
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0437681
TTC3 tetratricopeptide repeat domain 3 -0.0431509
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0427973
RAI14 retinoic acid induced 14 -0.0418022
POTEF POTE ankyrin domain family, member F -0.0416289
PAX8 paired box 8 -0.0412782
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.0406438
COG6 component of oligomeric golgi complex 6 -0.0403138
SDCBP syndecan binding protein (syntenin) -0.0400095
BIRC6 baculoviral IAP repeat containing 6 -0.039875
BLZF1 basic leucine zipper nuclear factor 1 -0.0398379
SETX senataxin -0.039249
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0386168
SND1 staphylococcal nuclease and tudor domain containing 1 -0.0384513
COPB1 coatomer protein complex, subunit beta 1 -0.0381574
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0376095
PDIA3 protein disulfide isomerase family A, member 3 -0.037459
RAB7A RAB7A, member RAS oncogene family -0.037368
PDIA6 protein disulfide isomerase family A, member 6 -0.0359924
MON2 MON2 homolog (S. cerevisiae) -0.0356841
TFPI2 tissue factor pathway inhibitor 2 -0.035428
RAB2A RAB2A, member RAS oncogene family -0.0346251
CALU calumenin -0.0340033
ACBD3 acyl-CoA binding domain containing 3 -0.0339136
ANKRD11 ankyrin repeat domain 11 -0.0337297
ANKRD33B ankyrin repeat domain 33B -0.0333112
FNIP1 folliculin interacting protein 1 -0.0329885
ANKIB1 ankyrin repeat and IBR domain containing 1 -0.0328831
SUCO SUN domain containing ossification factor -0.0324696
NDEL1 nudE neurodevelopment protein 1-like 1 -0.0322736
SBF2 SET binding factor 2 -0.0320831
MORF4L2 mortality factor 4 like 2 -0.0317672
SEC24A SEC24 family member A -0.0317505
SQSTM1 sequestosome 1 -0.0317278
PPP1R15B protein phosphatase 1, regulatory subunit 15B -0.0312185
TRA2A transformer 2 alpha homolog (Drosophila) -0.0307144
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 -0.0307083
FAM107B family with sequence similarity 107, member B -0.0306755
ATP13A3 ATPase type 13A3 -0.0305837
HMGA1 high mobility group AT-hook 1 -0.0305446
SCFD2 sec1 family domain containing 2 -0.0303848
PSME4 proteasome (prosome, macropain) activator subunit 4 -0.0300242
SPDYA speedy/RINGO cell cycle regulator family member A -0.0298842
HELZ helicase with zinc finger -0.0298014
LIMS1 LIM and senescent cell antigen-like domains 1 -0.0295138
AKT3 v-akt murine thymoma viral oncogene homolog 3 -0.0293795
TSC22D2 TSC22 domain family, member 2 -0.0293783
ITPR1 inositol 1,4,5-trisphosphate receptor, type 1 -0.0293342
MAP1B microtubule-associated protein 1B -0.0292841
RIGI RNA sensor RIG-I -0.0290609
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.02902
HSPB1 heat shock 27kDa protein 1 -0.0289969
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 -0.028945
SRP54 signal recognition particle 54kDa -0.0288135
GOLGB1 golgin B1 -0.0285045
TMEM263 transmembrane protein 263 -0.0284964
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 -0.0284759
UBAP2 ubiquitin associated protein 2 -0.0284116
ANKRD17 ankyrin repeat domain 17 -0.0284112
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0283808
MARCHF6 membrane associated ring-CH-type finger 6 -0.0282888
CLIP2 CAP-GLY domain containing linker protein 2 -0.0281204
RUNX1 runt-related transcription factor 1 -0.0280616
PNPLA8 patatin-like phospholipase domain containing 8 -0.0280596
RND3 Rho family GTPase 3 -0.028025
SAMD4A sterile alpha motif domain containing 4A -0.0280198
GOLGA4 golgin A4 -0.0278276
RNF220 ring finger protein 220 -0.027667
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0276625
CNOT1 CCR4-NOT transcription complex, subunit 1 -0.0275127
RPS6KC1 ribosomal protein S6 kinase, 52kDa, polypeptide 1 -0.0272212
CREB5 cAMP responsive element binding protein 5 -0.026789
FNDC3A fibronectin type III domain containing 3A -0.0266896
AFTPH aftiphilin -0.0266519