SBI-0640756_AN3 CA Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description SBI-0640756 perturbation in AN3 CA cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the SBI-0640756_AN3 CA drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0892427
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0526265
DNAJB1 DnaJ (Hsp40) homolog, subfamily B, member 1 0.0502366
ZFP36L1 ZFP36 ring finger protein-like 1 0.0389411
OSBPL8 oxysterol binding protein-like 8 0.0332942
PTMA prothymosin, alpha 0.0314391
LOC102724023 ES1 protein homolog, mitochondrial 0.0314045
BRD2 bromodomain containing 2 0.0295484
RPL4 ribosomal protein L4 0.0283503
DDIT4 DNA-damage-inducible transcript 4 0.028005
SQSTM1 sequestosome 1 0.027893
BCOR BCL6 corepressor 0.0277979
ZSWIM6 zinc finger, SWIM-type containing 6 0.025843
HMGB2 high mobility group box 2 0.0255326
NGLY1 N-glycanase 1 0.023469
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0234445
NR4A2 nuclear receptor subfamily 4, group A, member 2 0.02338
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0230699
CLDN4 claudin 4 0.0228809
CNOT6L CCR4-NOT transcription complex, subunit 6-like 0.0226032
ANKRD33B ankyrin repeat domain 33B 0.0225598
TAF2 TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa 0.0224763
ZEB1 zinc finger E-box binding homeobox 1 0.0223071
UBC ubiquitin C 0.022241
RAI1 retinoic acid induced 1 0.0220424
ARF1 ADP-ribosylation factor 1 0.021364
ATXN1 ataxin 1 0.0210924
TAC4 tachykinin 4 (hemokinin) 0.0207017
H3-3B H3.3 histone B 0.0198202
UBE2E2 ubiquitin-conjugating enzyme E2E 2 0.0195495
ABHD3 abhydrolase domain containing 3 0.0193944
PKM pyruvate kinase, muscle 0.0193936
FAM168A family with sequence similarity 168, member A 0.0191462
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0189912
TIPARP TCDD-inducible poly(ADP-ribose) polymerase 0.0184903
PHF3 PHD finger protein 3 0.0184503
FLNB filamin B, beta 0.0183954
ZNF292 zinc finger protein 292 0.018335
USP53 ubiquitin specific peptidase 53 0.0181162
MKI67 marker of proliferation Ki-67 0.0180697
MED13 mediator complex subunit 13 0.0177723
CTNNAL1 catenin (cadherin-associated protein), alpha-like 1 0.0175617
CENPC centromere protein C 0.0173813
KDM4C lysine (K)-specific demethylase 4C 0.017162
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0171458
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) 0.0170103
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta 0.0169003
RPL37 ribosomal protein L37 0.0167544
TACC3 transforming, acidic coiled-coil containing protein 3 0.0166574
KLF3 Kruppel-like factor 3 (basic) 0.0166476
TRPM7 transient receptor potential cation channel, subfamily M, member 7 0.016634
SENP5 SUMO1/sentrin specific peptidase 5 0.0164814
SSBP4 single stranded DNA binding protein 4 0.0164255
GYS1 glycogen synthase 1 (muscle) 0.0163182
ZC3H6 zinc finger CCCH-type containing 6 0.0159428
PPP2R3A protein phosphatase 2, regulatory subunit B'', alpha 0.0159428
TPM3 tropomyosin 3 0.0158138
MBD5 methyl-CpG binding domain protein 5 0.0156932
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.0156582
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0155741
KLF5 Kruppel-like factor 5 (intestinal) 0.0152386
PPP6R1 protein phosphatase 6, regulatory subunit 1 0.0147674
OSBPL9 oxysterol binding protein-like 9 0.0146255
USP24 ubiquitin specific peptidase 24 0.0145794
FUS FUS RNA binding protein 0.0145379
AHI1 Abelson helper integration site 1 0.0145023
TAF7 TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa 0.0144535
FILIP1L filamin A interacting protein 1-like 0.0144342
ITCH itchy E3 ubiquitin protein ligase 0.0144108
TEX10 testis expressed 10 0.0144013
FGFR1 fibroblast growth factor receptor 1 0.01438
NDUFA10 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa 0.0143434
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.0142944
XRRA1 X-ray radiation resistance associated 1 0.0142157
PTP4A2 protein tyrosine phosphatase type IVA, member 2 0.0141715
SREBF2 sterol regulatory element binding transcription factor 2 0.0141518
PLPPR4 phospholipid phosphatase related 4 0.0141311
SMIM12 small integral membrane protein 12 0.0141156
EGLN1 egl-9 family hypoxia-inducible factor 1 0.0140588
KANK1 KN motif and ankyrin repeat domains 1 0.0140551
PYCR2 pyrroline-5-carboxylate reductase family, member 2 0.0140208
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 0.0140194
WDFY1 WD repeat and FYVE domain containing 1 0.0138321
SAP30 Sin3A-associated protein, 30kDa 0.0138096
SOD1 superoxide dismutase 1, soluble 0.013749
HLA-B major histocompatibility complex, class I, B 0.0137011
MBNL2 muscleblind-like splicing regulator 2 0.0136874
ZNF318 zinc finger protein 318 0.0136369
LARP1B La ribonucleoprotein domain family, member 1B 0.013626
FLNA filamin A, alpha 0.0135889
RAD9A RAD9 homolog A (S. pombe) 0.0135139
EIF5B eukaryotic translation initiation factor 5B 0.0135049
LRRC69 leucine rich repeat containing 69 0.0134899
PCSK5 proprotein convertase subtilisin/kexin type 5 0.0134565
OSBP2 oxysterol binding protein 2 0.0134519
RPS12 ribosomal protein S12 0.0134512
GOLGB1 golgin B1 0.013443
HSPA1B heat shock 70kDa protein 1B 0.0133284
IARS2 isoleucyl-tRNA synthetase 2, mitochondrial 0.0133008
GARS1 glycyl-tRNA synthetase 1 0.0132909

decreased expression

Symbol Name Standardized Value
MEST mesoderm specific transcript -0.308841
PRKG1 protein kinase, cGMP-dependent, type I -0.14385
CADM2 cell adhesion molecule 2 -0.107639
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0962435
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0896815
VIM vimentin -0.0884333
PEG10 paternally expressed 10 -0.0879939
MGP matrix Gla protein -0.0681255
PDE4D phosphodiesterase 4D, cAMP-specific -0.0647819
B3GALT1 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 -0.0548948
TPK1 thiamin pyrophosphokinase 1 -0.0528653
COL1A2 collagen, type I, alpha 2 -0.0490065
MEOX2 mesenchyme homeobox 2 -0.0419224
TSHZ2 teashirt zinc finger homeobox 2 -0.0409878
SSBP2 single-stranded DNA binding protein 2 -0.0402269
SMYD3 SET and MYND domain containing 3 -0.0361344
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.035234
FBXL7 F-box and leucine-rich repeat protein 7 -0.0340014
ZFAND3 zinc finger, AN1-type domain 3 -0.0329482
EEF2 eukaryotic translation elongation factor 2 -0.032709
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0318128
SEPTIN11 septin 11 -0.0316435
RPS23 ribosomal protein S23 -0.0312053
FER fer (fps/fes related) tyrosine kinase -0.030367
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0288124
DLG1 discs, large homolog 1 (Drosophila) -0.0281824
TMSB10 thymosin beta 10 -0.0281263
THSD4 thrombospondin, type I, domain containing 4 -0.0272349
NFIA nuclear factor I/A -0.0268432
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0261606
RBM25 RNA binding motif protein 25 -0.0261603
NFIB nuclear factor I/B -0.0260511
PCBP2 poly(rC) binding protein 2 -0.0256622
CSDE1 cold shock domain containing E1, RNA-binding -0.0254458
MYCBP2 MYC binding protein 2, E3 ubiquitin protein ligase -0.0252289
RAD51B RAD51 paralog B -0.0251534
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 -0.0250606
BCAS3 breast carcinoma amplified sequence 3 -0.0250433
ZBTB20 zinc finger and BTB domain containing 20 -0.0249437
DIAPH3 diaphanous-related formin 3 -0.0246798
TCF12 transcription factor 12 -0.0245822
SFTPA2 surfactant protein A2 -0.0244453
HMGA2 high mobility group AT-hook 2 -0.0234901
SRPK2 SRSF protein kinase 2 -0.0234244
AK1 adenylate kinase 1 -0.0230962
TRA2A transformer 2 alpha homolog (Drosophila) -0.0229596
ACTG1 actin gamma 1 -0.0220759
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0219582
EXOC4 exocyst complex component 4 -0.0214978
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0212494
TUT4 terminal uridylyl transferase 4 -0.0209751
COL5A2 collagen, type V, alpha 2 -0.0209372
CMSS1 cms1 ribosomal small subunit homolog (yeast) -0.0209217
ANKRD17 ankyrin repeat domain 17 -0.0208595
BTBD3 BTB (POZ) domain containing 3 -0.0208584
PBX3 pre-B-cell leukemia homeobox 3 -0.0208196
RPL34 ribosomal protein L34 -0.0208085
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 -0.0207003
KMT2E lysine (K)-specific methyltransferase 2E -0.0206871
TTC28 tetratricopeptide repeat domain 28 -0.0206642
RPS24 ribosomal protein S24 -0.0205842
WASF2 WAS protein family, member 2 -0.0205119
RPL11 ribosomal protein L11 -0.0202775
CANX calnexin -0.0202715
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0201573
PRELID2 PRELI domain containing 2 -0.0201245
TXNRD1 thioredoxin reductase 1 -0.0199299
PUM2 pumilio RNA-binding family member 2 -0.0196268
HDAC8 histone deacetylase 8 -0.0195356
DHX9 DEAH (Asp-Glu-Ala-His) box helicase 9 -0.0195198
ITGAV integrin, alpha V -0.0194825
RPL32 ribosomal protein L32 -0.0193042
RPLP0 ribosomal protein, large, P0 -0.0192136
SMARCA1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 -0.0191753
SOX6 SRY (sex determining region Y)-box 6 -0.0191571
USP34 ubiquitin specific peptidase 34 -0.0190643
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide -0.0188903
TPM4 tropomyosin 4 -0.0187949
HOXA3 homeobox A3 -0.0187536
PDIA3 protein disulfide isomerase family A, member 3 -0.0186581
IGF2R insulin-like growth factor 2 receptor -0.0186508
ARID1B AT rich interactive domain 1B (SWI1-like) -0.0186264
GMDS GDP-mannose 4,6-dehydratase -0.0185598
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.018499
MSRB3 methionine sulfoxide reductase B3 -0.0184579
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 -0.0183372
RPL8 ribosomal protein L8 -0.0181715
TIMP1 TIMP metallopeptidase inhibitor 1 -0.018111
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) -0.0179125
SREK1 splicing regulatory glutamine/lysine-rich protein 1 -0.0177207
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 -0.0176701
MAML2 mastermind-like 2 (Drosophila) -0.0176672
RPS6 ribosomal protein S6 -0.0174476
UBE2D3 ubiquitin-conjugating enzyme E2D 3 -0.0173381
SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 -0.017273
RHEB Ras homolog enriched in brain -0.0172197
LPP LIM domain containing preferred translocation partner in lipoma -0.0172074
GPM6B glycoprotein M6B -0.0171323
RPS4X ribosomal protein S4, X-linked -0.0170877
TENT4A terminal nucleotidyltransferase 4A -0.0170748