SBI-0640756_C-33 A Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description SBI-0640756 perturbation in C-33 A cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the SBI-0640756_C-33 A drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PRRC2C proline-rich coiled-coil 2C 0.0349058
SMYD3 SET and MYND domain containing 3 0.0300015
RPS3 ribosomal protein S3 0.0285387
INTS6 integrator complex subunit 6 0.0253805
RPS12 ribosomal protein S12 0.0253194
BRD4 bromodomain containing 4 0.0247809
RPL9 ribosomal protein L9 0.0224958
PRPF4B pre-mRNA processing factor 4B 0.0218928
NR2F1 nuclear receptor subfamily 2, group F, member 1 0.0217362
SRSF4 serine/arginine-rich splicing factor 4 0.021498
ATF4 activating transcription factor 4 0.0202423
UBE2H ubiquitin-conjugating enzyme E2H 0.0202258
UBAP2 ubiquitin associated protein 2 0.0196321
PTPRF protein tyrosine phosphatase, receptor type, F 0.0194494
EIF1 eukaryotic translation initiation factor 1 0.0190812
KDM3B lysine (K)-specific demethylase 3B 0.0190606
ANKRD12 ankyrin repeat domain 12 0.0180822
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0180321
OGA O-GlcNAcase 0.0178969
PSPC1 paraspeckle component 1 0.0174946
MSH4 mutS homolog 4 0.0171248
HERPUD1 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 0.0170143
VCL vinculin 0.0169832
SRRM2 serine/arginine repetitive matrix 2 0.0168136
RBM25 RNA binding motif protein 25 0.0165946
RPS15A ribosomal protein S15a 0.016404
PHF14 PHD finger protein 14 0.0162621
CCSAP centriole, cilia and spindle-associated protein 0.0158288
JMJD1C jumonji domain containing 1C 0.0154822
PABPN1 poly(A) binding protein, nuclear 1 0.0151692
RPL13A ribosomal protein L13a 0.0150469
ZNF644 zinc finger protein 644 0.0149972
RPL4 ribosomal protein L4 0.01495
IGF2 insulin-like growth factor 2 0.0146362
TECPR2 tectonin beta-propeller repeat containing 2 0.0145287
KALRN kalirin, RhoGEF kinase 0.0142501
RBBP6 retinoblastoma binding protein 6 0.0140947
SPOPL speckle-type POZ protein-like 0.0139857
EPC2 enhancer of polycomb homolog 2 (Drosophila) 0.0139116
ZC3H6 zinc finger CCCH-type containing 6 0.0138792
GPATCH2L G patch domain containing 2-like 0.0138171
TPTEP2-CSNK1E TPTEP2-CSNK1E readthrough 0.0136913
DNAJC9 DnaJ (Hsp40) homolog, subfamily C, member 9 0.0136437
BRWD1 bromodomain and WD repeat domain containing 1 0.0135378
SPECC1L sperm antigen with calponin homology and coiled-coil domains 1-like 0.0134988
RSRP1 arginine/serine-rich protein 1 0.0134751
SCFD1 sec1 family domain containing 1 0.013339
GIGYF2 GRB10 interacting GYF protein 2 0.0133137
ZFYVE28 zinc finger, FYVE domain containing 28 0.0131903
ZNF34 zinc finger protein 34 0.013123
EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit 0.0130576
ANK2 ankyrin 2, neuronal 0.0130234
GPBP1 GC-rich promoter binding protein 1 0.0129956
WSB1 WD repeat and SOCS box containing 1 0.0129821
MSL2 male-specific lethal 2 homolog (Drosophila) 0.0129743
UBE2D2 ubiquitin-conjugating enzyme E2D 2 0.0129358
KDM4B lysine (K)-specific demethylase 4B 0.0127996
ZNF586 zinc finger protein 586 0.0127896
CABIN1 calcineurin binding protein 1 0.0127061
NCAPG2 non-SMC condensin II complex, subunit G2 0.0125806
TPST1 tyrosylprotein sulfotransferase 1 0.012524
YARS1 tyrosyl-tRNA synthetase 1 0.0124847
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) 0.012405
DSCAM Down syndrome cell adhesion molecule 0.0123609
CNOT6 CCR4-NOT transcription complex, subunit 6 0.0123565
HGS hepatocyte growth factor-regulated tyrosine kinase substrate 0.0122965
GABRR2 gamma-aminobutyric acid (GABA) A receptor, rho 2 0.0121895
KIAA1328 KIAA1328 0.0121185
GARS1 glycyl-tRNA synthetase 1 0.0120121
DTNB dystrobrevin, beta 0.0119812
NABP1 nucleic acid binding protein 1 0.0119128
MNMIP1 manchette microtubule inner protein 1 0.0119094
LIMA1 LIM domain and actin binding 1 0.0118912
SLIT2 slit homolog 2 (Drosophila) 0.0118689
NDUFS4 NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase) 0.0117703
PDE7A phosphodiesterase 7A 0.0117444
UBN2 ubinuclein 2 0.0115955
BBS9 Bardet-Biedl syndrome 9 0.0115945
SHISA5 shisa family member 5 0.0115636
STK38L serine/threonine kinase 38 like 0.0115585
C3 complement component 3 0.0115184
ZMYND11 zinc finger, MYND-type containing 11 0.0115104
CLCN3 chloride channel, voltage-sensitive 3 0.0114799
ATF3 activating transcription factor 3 0.0114326
CCDC32 coiled-coil domain containing 32 0.0114076
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa 0.0114036
IWS1 IWS1 homolog (S. cerevisiae) 0.0113862
SFPQ splicing factor proline/glutamine-rich 0.0113535
ZFPM2 zinc finger protein, FOG family member 2 0.0113328
MBOAT7 membrane bound O-acyltransferase domain containing 7 0.0112974
ANAPC16 anaphase promoting complex subunit 16 0.0112927
AXIN1 axin 1 0.0111515
NLRP4 NLR family, pyrin domain containing 4 0.0111382
PPP1R12A protein phosphatase 1, regulatory subunit 12A 0.011131
ASNS asparagine synthetase (glutamine-hydrolyzing) 0.0110055
CDH19 cadherin 19, type 2 0.0109204
PSAT1 phosphoserine aminotransferase 1 0.0107791
MON2 MON2 homolog (S. cerevisiae) 0.0107238
SRF serum response factor (c-fos serum response element-binding transcription factor) 0.0107066
MAP3K13 mitogen-activated protein kinase kinase kinase 13 0.0105742

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.262509
TENM3 teneurin transmembrane protein 3 -0.151203
ERBB4 erb-b2 receptor tyrosine kinase 4 -0.149661
CTNNA2 catenin (cadherin-associated protein), alpha 2 -0.135909
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 -0.11248
CTNNA3 catenin (cadherin-associated protein), alpha 3 -0.104989
SEMA3D sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D -0.101221
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0904044
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0874988
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0873791
RAD51B RAD51 paralog B -0.0817585
NPAS3 neuronal PAS domain protein 3 -0.0752326
ACTG1 actin gamma 1 -0.0741713
KTN1 kinectin 1 (kinesin receptor) -0.0700134
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0666405
ADGRG6 adhesion G protein-coupled receptor G6 -0.0650286
PRKDC protein kinase, DNA-activated, catalytic polypeptide -0.0649497
LDHA lactate dehydrogenase A -0.0643262
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.059901
RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2 -0.0591643
RPLP1 ribosomal protein, large, P1 -0.0587673
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0580074
FMNL2 formin-like 2 -0.0579252
CELF2 CUGBP, Elav-like family member 2 -0.0574967
RPS6 ribosomal protein S6 -0.0552285
RPL11 ribosomal protein L11 -0.0525493
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 -0.0520575
SOX4 SRY (sex determining region Y)-box 4 -0.051551
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0503983
CENPF centromere protein F, 350/400kDa -0.0498156
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0464989
TMSB10 thymosin beta 10 -0.0462204
PDE4D phosphodiesterase 4D, cAMP-specific -0.0452658
RAP1B RAP1B, member of RAS oncogene family -0.0445007
TPD52 tumor protein D52 -0.0437768
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0435171
PGK1 phosphoglycerate kinase 1 -0.0433682
RHOA ras homolog family member A -0.0433041
LRPPRC leucine-rich pentatricopeptide repeat containing -0.0431961
NCOR1 nuclear receptor corepressor 1 -0.0426919
SHROOM3 shroom family member 3 -0.0423869
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0421338
TOX thymocyte selection-associated high mobility group box -0.0416974
NEBL nebulette -0.0413276
EMP1 epithelial membrane protein 1 -0.0412561
COL5A2 collagen, type V, alpha 2 -0.0409885
RPS21 ribosomal protein S21 -0.0396118
RPLP0 ribosomal protein, large, P0 -0.0395793
PDIA3 protein disulfide isomerase family A, member 3 -0.0385938
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0385395
RPL7A ribosomal protein L7a -0.0371783
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 -0.0371213
CDH18 cadherin 18, type 2 -0.0371155
PTGES3 prostaglandin E synthase 3 (cytosolic) -0.0370545
CANX calnexin -0.0363285
NR5A2 nuclear receptor subfamily 5, group A, member 2 -0.0358901
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0348025
CASK calcium/calmodulin-dependent serine protein kinase (MAGUK family) -0.0344116
RPL8 ribosomal protein L8 -0.0342057
HMGA1 high mobility group AT-hook 1 -0.0341436
SERBP1 SERPINE1 mRNA binding protein 1 -0.0341238
RPS19 ribosomal protein S19 -0.0339889
TTC3 tetratricopeptide repeat domain 3 -0.0339557
SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 -0.033488
GNAS GNAS complex locus -0.033152
ARB2A ARB2 cotranscriptional regulator A -0.0330676
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0325944
KIAA1958 KIAA1958 -0.0324691
TUBA1B tubulin, alpha 1b -0.0323275
NFIA nuclear factor I/A -0.032211
TAOK1 TAO kinase 1 -0.0319736
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0318084
HHIP hedgehog interacting protein -0.0317508
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0314637
TRIO trio Rho guanine nucleotide exchange factor -0.0311781
RPS11 ribosomal protein S11 -0.0311658
FOXO3 forkhead box O3 -0.0310274
TUBB tubulin, beta class I -0.0309164
LRBA LPS-responsive vesicle trafficking, beach and anchor containing -0.0306557
DCDC2 doublecortin domain containing 2 -0.0305303
RPL23 ribosomal protein L23 -0.0303731
RPLP2 ribosomal protein, large, P2 -0.0302097
GJA1 gap junction protein, alpha 1, 43kDa -0.0299235
NF1 neurofibromin 1 -0.0298939
B2M beta-2-microglobulin -0.0298617
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.029373
ARID2 AT rich interactive domain 2 (ARID, RFX-like) -0.0293659
PFN1 profilin 1 -0.0292127
WDR45B WD repeat domain 45B -0.0289415
DEK DEK proto-oncogene -0.028932
ATP11A ATPase, class VI, type 11A -0.0288321
PTPRG protein tyrosine phosphatase, receptor type, G -0.0288122
OSBPL10 oxysterol binding protein-like 10 -0.0287312
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0284092
NRG1 neuregulin 1 -0.0280672
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 -0.0278957
IFI6 interferon, alpha-inducible protein 6 -0.0277224
HNRNPK heterogeneous nuclear ribonucleoprotein K -0.0276575
VMP1 vacuole membrane protein 1 -0.0276214
RPL19 ribosomal protein L19 -0.027582