SBI-0640756_HT-29 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description SBI-0640756 perturbation in HT-29 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the SBI-0640756_HT-29 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0929334
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0900443
FTL ferritin, light polypeptide 0.0715506
RPL4 ribosomal protein L4 0.0707582
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0631082
NTN4 netrin 4 0.0618108
RPS12 ribosomal protein S12 0.0597143
RPS3 ribosomal protein S3 0.0547117
RPL37A ribosomal protein L37a 0.0484984
SRRM2 serine/arginine repetitive matrix 2 0.0456703
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0413904
INTS6 integrator complex subunit 6 0.0407547
HKDC1 hexokinase domain containing 1 0.0405121
HSPH1 heat shock 105kDa/110kDa protein 1 0.039669
EGR1 early growth response 1 0.0394865
OGA O-GlcNAcase 0.0394214
UBXN4 UBX domain protein 4 0.0378959
KMT2C lysine (K)-specific methyltransferase 2C 0.0376659
LOC102724023 ES1 protein homolog, mitochondrial 0.0375665
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0363834
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0353446
EIF1 eukaryotic translation initiation factor 1 0.0343164
AREG amphiregulin 0.034291
VCL vinculin 0.0326253
HSPA8 heat shock 70kDa protein 8 0.0326236
ADARB1 adenosine deaminase, RNA-specific, B1 0.0325727
NFE2L2 nuclear factor, erythroid 2-like 2 0.0323802
PLAUR plasminogen activator, urokinase receptor 0.0319738
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0318399
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0318171
HLA-A major histocompatibility complex, class I, A 0.0311322
NUP58 nucleoporin 58 0.0309574
DDIT3 DNA-damage-inducible transcript 3 0.0303443
EIF2S2 eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa 0.0299412
JAK1 Janus kinase 1 0.0291118
PTPRF protein tyrosine phosphatase, receptor type, F 0.0289506
NAP1L1 nucleosome assembly protein 1-like 1 0.0274575
SEMA3B sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B 0.0266735
S100P S100 calcium binding protein P 0.0265525
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 0.0263759
UQCRB ubiquinol-cytochrome c reductase binding protein 0.0262769
YTHDC1 YTH domain containing 1 0.02624
GRB10 growth factor receptor-bound protein 10 0.0260466
BRD2 bromodomain containing 2 0.0260417
AHDC1 AT hook, DNA binding motif, containing 1 0.0253757
ARID1A AT rich interactive domain 1A (SWI-like) 0.0251843
EGFR epidermal growth factor receptor 0.0250498
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0250106
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0249397
ADM adrenomedullin 0.0247847
SKP1 S-phase kinase-associated protein 1 0.0247073
ATF3 activating transcription factor 3 0.0246238
SNX14 sorting nexin 14 0.0245495
MYO6 myosin VI 0.0245094
PRRC2C proline-rich coiled-coil 2C 0.0244948
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0244763
SRPK2 SRSF protein kinase 2 0.0241817
GARS1 glycyl-tRNA synthetase 1 0.0241624
HNRNPD heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) 0.024141
RPS18 ribosomal protein S18 0.0241102
GLCCI1 glucocorticoid induced 1 0.0240519
HBP1 HMG-box transcription factor 1 0.024012
PRPF4B pre-mRNA processing factor 4B 0.0239236
SEC62 SEC62 homolog (S. cerevisiae) 0.0234954
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric 0.02346
UBASH3B ubiquitin associated and SH3 domain containing B 0.0234427
RAB7A RAB7A, member RAS oncogene family 0.0231959
GANAB glucosidase, alpha; neutral AB 0.0226517
SRSF9 serine/arginine-rich splicing factor 9 0.0226277
MARS1 methionyl-tRNA synthetase 1 0.0223228
GAREM1 GRB2 associated regulator of MAPK1 subtype 1 0.021789
ZNFX1 zinc finger, NFX1-type containing 1 0.0213639
GOLM2 golgi membrane protein 2 0.021054
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0205507
PRAG1 PEAK1 related, kinase-activating pseudokinase 1 0.0204982
TLK1 tousled-like kinase 1 0.020414
VIM vimentin 0.0203759
SH3KBP1 SH3-domain kinase binding protein 1 0.0202358
RPL13A ribosomal protein L13a 0.020191
EPRS1 glutamyl-prolyl-tRNA synthetase 1 0.0201537
KTN1 kinectin 1 (kinesin receptor) 0.0201373
BICD1 bicaudal D homolog 1 (Drosophila) 0.0200924
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.0199693
SLMAP sarcolemma associated protein 0.0199227
GPBP1 GC-rich promoter binding protein 1 0.0198922
TPI1 triosephosphate isomerase 1 0.0198641
SRRM1 serine/arginine repetitive matrix 1 0.0197883
GGNBP2 gametogenetin binding protein 2 0.0197028
PRRC2B proline-rich coiled-coil 2B 0.0196462
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa 0.0195849
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0193733
NEDD9 neural precursor cell expressed, developmentally down-regulated 9 0.019244
LCN2 lipocalin 2 0.01916
RLF rearranged L-myc fusion 0.0191241
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0187447
RIC8A RIC8 guanine nucleotide exchange factor A 0.0186129
PARP4 poly (ADP-ribose) polymerase family, member 4 0.0185991
CTDSPL2 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 0.0185393
TOP6BL TOP6B like initiator of meiotic double strand breaks 0.0185041
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0184003

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.152007
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.123238
ANXA2 annexin A2 -0.111807
KRT20 keratin 20, type I -0.109043
LYZ lysozyme -0.107127
GMDS GDP-mannose 4,6-dehydratase -0.100323
TPT1 tumor protein, translationally-controlled 1 -0.0964907
EPS8 epidermal growth factor receptor pathway substrate 8 -0.0878162
SAMD12 sterile alpha motif domain containing 12 -0.0864074
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0863625
ACTN4 actinin, alpha 4 -0.0855072
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 -0.0846694
CCSER1 coiled-coil serine-rich protein 1 -0.0824841
PTPRK protein tyrosine phosphatase, receptor type, K -0.0781138
ATXN1 ataxin 1 -0.0759926
EZR ezrin -0.0758107
FRY furry homolog (Drosophila) -0.0737122
LMO7 LIM domain 7 -0.0726868
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0704725
PDE4D phosphodiesterase 4D, cAMP-specific -0.0699568
POTEF POTE ankyrin domain family, member F -0.0689092
DIAPH2 diaphanous-related formin 2 -0.0673873
PDIA3 protein disulfide isomerase family A, member 3 -0.0667423
NAALADL2 N-acetylated alpha-linked acidic dipeptidase-like 2 -0.0634266
DGKH diacylglycerol kinase, eta -0.0613211
CYP3A5 cytochrome P450, family 3, subfamily A, polypeptide 5 -0.0605944
FOSB FBJ murine osteosarcoma viral oncogene homolog B -0.0555114
RPL23 ribosomal protein L23 -0.0548111
NSMCE2 non-SMC element 2, MMS21 homolog (S. cerevisiae) -0.0535082
KRT18 keratin 18, type I -0.0532159
KRT8 keratin 8, type II -0.0531726
TM4SF4 transmembrane 4 L six family member 4 -0.0514544
EMP1 epithelial membrane protein 1 -0.0510062
S100A6 S100 calcium binding protein A6 -0.048938
TJP1 tight junction protein 1 -0.0480668
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0478736
LAMA4 laminin, alpha 4 -0.0477311
RPS5 ribosomal protein S5 -0.0476215
AGR2 anterior gradient 2 -0.0475539
S100A10 S100 calcium binding protein A10 -0.0474544
PRELID2 PRELI domain containing 2 -0.0473964
PTK2 protein tyrosine kinase 2 -0.04657
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) -0.046396
AHNAK AHNAK nucleoprotein -0.046304
ITGA6 integrin, alpha 6 -0.0462455
RPL21 ribosomal protein L21 -0.0462315
PDZD8 PDZ domain containing 8 -0.0458317
TMEM123 transmembrane protein 123 -0.0457838
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0456246
MAML3 mastermind-like 3 (Drosophila) -0.0447956
EXOC4 exocyst complex component 4 -0.0444054
TRAPPC9 trafficking protein particle complex 9 -0.0442842
LDHA lactate dehydrogenase A -0.0440887
NDRG1 N-myc downstream regulated 1 -0.0435211
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 -0.042343
PAN3 PAN3 poly(A) specific ribonuclease subunit -0.0421116
RPS23 ribosomal protein S23 -0.0407478
SKIL SKI-like proto-oncogene -0.040688
ZBTB20 zinc finger and BTB domain containing 20 -0.0403161
RPS6 ribosomal protein S6 -0.0400223
ASTN2 astrotactin 2 -0.0398789
WASF2 WAS protein family, member 2 -0.039706
FTH1 ferritin, heavy polypeptide 1 -0.039381
SPINT2 serine peptidase inhibitor, Kunitz type, 2 -0.0389125
ABCC3 ATP-binding cassette, sub-family C (CFTR/MRP), member 3 -0.0385956
SMAD3 SMAD family member 3 -0.0380952
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0378574
RPS21 ribosomal protein S21 -0.0366835
MYO1E myosin IE -0.0362829
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0361187
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase -0.0360826
PPDPF pancreatic progenitor cell differentiation and proliferation factor -0.0360039
TXNRD1 thioredoxin reductase 1 -0.0358975
LPP LIM domain containing preferred translocation partner in lipoma -0.0353989
CD164 CD164 molecule, sialomucin -0.035335
MLLT3 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3 -0.0353044
GCLC glutamate-cysteine ligase, catalytic subunit -0.0350628
GCNT3 glucosaminyl (N-acetyl) transferase 3, mucin type -0.035038
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) -0.0350209
FOS FBJ murine osteosarcoma viral oncogene homolog -0.0347428
BPTF bromodomain PHD finger transcription factor -0.0343885
ZNF609 zinc finger protein 609 -0.0343815
ABHD2 abhydrolase domain containing 2 -0.0342345
TMEM65 transmembrane protein 65 -0.0341404
CYSTM1 cysteine-rich transmembrane module containing 1 -0.0341346
RPL8 ribosomal protein L8 -0.0339694
ARL5B ADP-ribosylation factor-like 5B -0.0338945
MMP7 matrix metallopeptidase 7 -0.0336135
RPL27A ribosomal protein L27a -0.0335759
FNDC3B fibronectin type III domain containing 3B -0.0333343
ACTG1 actin gamma 1 -0.032718
TMBIM6 transmembrane BAX inhibitor motif containing 6 -0.0325874
ETNK1 ethanolamine kinase 1 -0.0325249
ARHGAP26 Rho GTPase activating protein 26 -0.03251
PATJ PATJ crumbs cell polarity complex component -0.0320355
MYH14 myosin, heavy chain 14, non-muscle -0.0319605
GSK3B glycogen synthase kinase 3 beta -0.0317486
SPDYA speedy/RINGO cell cycle regulator family member A -0.0316323
RTN3 reticulon 3 -0.0315272
TAOK1 TAO kinase 1 -0.0311663