SBI-0640756_LOX-IMVI Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description SBI-0640756 perturbation in LOX-IMVI cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the SBI-0640756_LOX-IMVI drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HDAC9 histone deacetylase 9 0.10017
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0737825
RPS12 ribosomal protein S12 0.0660407
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0659805
DTNA dystrobrevin, alpha 0.0624602
RPS3 ribosomal protein S3 0.0609552
FTL ferritin, light polypeptide 0.0608313
MCTP1 multiple C2 domains, transmembrane 1 0.0603517
ENO2 enolase 2 (gamma, neuronal) 0.0594341
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0547256
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0522848
CREB5 cAMP responsive element binding protein 5 0.0505854
GPHN gephyrin 0.0488458
INTS6 integrator complex subunit 6 0.0482823
ADAM32 ADAM metallopeptidase domain 32 0.0460198
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0456138
RPL4 ribosomal protein L4 0.0413519
ZSWIM6 zinc finger, SWIM-type containing 6 0.0405119
RPS2 ribosomal protein S2 0.0400075
CXCL8 chemokine (C-X-C motif) ligand 8 0.0389514
SP100 SP100 nuclear antigen 0.0384794
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0384028
TLN1 talin 1 0.0357515
EGR1 early growth response 1 0.0357025
SRRM2 serine/arginine repetitive matrix 2 0.0353052
TXNRD1 thioredoxin reductase 1 0.0347914
ITSN2 intersectin 2 0.0337154
PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 0.0327655
ARFGEF3 ARFGEF family member 3 0.0310991
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0310885
NUP58 nucleoporin 58 0.0303104
FAT1 FAT atypical cadherin 1 0.0301386
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0297769
DSCAM Down syndrome cell adhesion molecule 0.0291033
NGLY1 N-glycanase 1 0.0282329
ASPH aspartate beta-hydroxylase 0.0281375
KDM3A lysine (K)-specific demethylase 3A 0.0278824
STC1 stanniocalcin 1 0.0275462
BRD2 bromodomain containing 2 0.0266452
GPC5 glypican 5 0.0263748
FAM162A family with sequence similarity 162, member A 0.0261571
PRRC2C proline-rich coiled-coil 2C 0.0252197
NR4A3 nuclear receptor subfamily 4, group A, member 3 0.0249133
MARCHF4 membrane associated ring-CH-type finger 4 0.0242777
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0237691
ENO1 enolase 1, (alpha) 0.023416
EEF2 eukaryotic translation elongation factor 2 0.023163
CCDC50 coiled-coil domain containing 50 0.0227569
KDM6B lysine (K)-specific demethylase 6B 0.0223745
MALT1 MALT1 paracaspase 0.0221841
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0220114
LIMA1 LIM domain and actin binding 1 0.0217121
CD163L1 CD163 molecule-like 1 0.0217054
NEK10 NIMA-related kinase 10 0.0215785
EIF5B eukaryotic translation initiation factor 5B 0.0213633
RPL37A ribosomal protein L37a 0.0210725
GADD45A growth arrest and DNA-damage-inducible, alpha 0.0209925
ANO6 anoctamin 6 0.0208522
LRP6 low density lipoprotein receptor-related protein 6 0.020805
PRRC2A proline-rich coiled-coil 2A 0.0206349
SLC25A5 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 0.020484
EIF1 eukaryotic translation initiation factor 1 0.0204256
CEP350 centrosomal protein 350kDa 0.0203602
FOXO3 forkhead box O3 0.020254
ERC1 ELKS/RAB6-interacting/CAST family member 1 0.0201653
RSRC2 arginine/serine-rich coiled-coil 2 0.0201229
STARD13 StAR-related lipid transfer (START) domain containing 13 0.0200592
SON SON DNA binding protein 0.0199373
RPL35A ribosomal protein L35a 0.0198729
NBEA neurobeachin 0.0198177
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 0.0196125
ATF3 activating transcription factor 3 0.0194255
EIF4A1 eukaryotic translation initiation factor 4A1 0.0190355
TTC3 tetratricopeptide repeat domain 3 0.0189796
BRWD1 bromodomain and WD repeat domain containing 1 0.0189768
RACK1 receptor for activated C kinase 1 0.018887
GOLGB1 golgin B1 0.0187726
IMMT inner membrane protein, mitochondrial 0.0187495
WWTR1 WW domain containing transcription regulator 1 0.0187006
DIAPH1 diaphanous-related formin 1 0.0186532
TTC27 tetratricopeptide repeat domain 27 0.0184382
GLS2 glutaminase 2 (liver, mitochondrial) 0.018195
DUSP6 dual specificity phosphatase 6 0.0181585
SNX14 sorting nexin 14 0.0180709
BHLHE40 basic helix-loop-helix family, member e40 0.0180306
BIRC3 baculoviral IAP repeat containing 3 0.018005
ANK3 ankyrin 3, node of Ranvier (ankyrin G) 0.0179043
KIAA1958 KIAA1958 0.0178902
TEX14 testis expressed 14 0.0178526
WNT2B wingless-type MMTV integration site family, member 2B 0.0175155
PTPRM protein tyrosine phosphatase, receptor type, M 0.0174877
TMEM14B transmembrane protein 14B 0.0172756
GLG1 golgi glycoprotein 1 0.0172002
ACVR1C activin A receptor, type IC 0.017094
EIF4B eukaryotic translation initiation factor 4B 0.0169619
IRS2 insulin receptor substrate 2 0.0169296
TFRC transferrin receptor 0.0169039
BAZ1A bromodomain adjacent to zinc finger domain, 1A 0.016884
PSEN1 presenilin 1 0.0168222
UBXN4 UBX domain protein 4 0.0168058

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.389345
AKAP12 A kinase (PRKA) anchor protein 12 -0.233933
VIM vimentin -0.164249
SLC8A1 solute carrier family 8 (sodium/calcium exchanger), member 1 -0.136986
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.133097
PLEKHA5 pleckstrin homology domain containing, family A member 5 -0.101242
AHNAK AHNAK nucleoprotein -0.100872
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.100315
MMP12 matrix metallopeptidase 12 -0.0900671
CDH13 cadherin 13 -0.079522
FN1 fibronectin 1 -0.077503
PBX3 pre-B-cell leukemia homeobox 3 -0.0755673
ANXA2 annexin A2 -0.0707425
LIMS1 LIM and senescent cell antigen-like domains 1 -0.0677598
NALF1 NALCN channel auxiliary factor 1 -0.0644473
PRKG1 protein kinase, cGMP-dependent, type I -0.0637466
FNDC3B fibronectin type III domain containing 3B -0.0633901
GPC6 glypican 6 -0.0618123
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.0607088
KIAA1549L KIAA1549-like -0.0602968
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0589746
PHACTR1 phosphatase and actin regulator 1 -0.0570461
PTMA prothymosin, alpha -0.0540771
RPS6 ribosomal protein S6 -0.0516773
SAMD3 sterile alpha motif domain containing 3 -0.0499027
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0498729
PTCHD4 patched domain containing 4 -0.0491841
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0486532
TMSB10 thymosin beta 10 -0.0482207
NTM neurotrimin -0.0478279
CDK6 cyclin-dependent kinase 6 -0.0473167
NAV1 neuron navigator 1 -0.0472147
TPM4 tropomyosin 4 -0.0471102
PTK2 protein tyrosine kinase 2 -0.0465915
CD44 CD44 molecule (Indian blood group) -0.0464004
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 -0.0451291
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 -0.0450874
CD109 CD109 molecule -0.0448788
FOXP1 forkhead box P1 -0.0448382
MAP4 microtubule-associated protein 4 -0.0436551
RPS24 ribosomal protein S24 -0.0436151
CTSB cathepsin B -0.0429731
VCL vinculin -0.0427157
EPB41L2 erythrocyte membrane protein band 4.1-like 2 -0.0420556
RPL7 ribosomal protein L7 -0.0419694
RPLP1 ribosomal protein, large, P1 -0.0414728
ALCAM activated leukocyte cell adhesion molecule -0.0404934
SBF2 SET binding factor 2 -0.0404407
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0400462
CANX calnexin -0.0400357
SIPA1L3 signal-induced proliferation-associated 1 like 3 -0.0393567
RBMS1 RNA binding motif, single stranded interacting protein 1 -0.0392584
RPS8 ribosomal protein S8 -0.0392045
HMGA1 high mobility group AT-hook 1 -0.0380359
MAP3K20 mitogen-activated protein kinase kinase kinase 20 -0.0379755
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0374256
RTN4 reticulon 4 -0.0374245
RPL8 ribosomal protein L8 -0.0369641
GNAQ guanine nucleotide binding protein (G protein), q polypeptide -0.0366011
PDE4D phosphodiesterase 4D, cAMP-specific -0.0363782
BRIP1 BRCA1 interacting protein C-terminal helicase 1 -0.0352692
HAS2 hyaluronan synthase 2 -0.0348157
RAB1A RAB1A, member RAS oncogene family -0.0348061
RAI14 retinoic acid induced 14 -0.0346797
KYNU kynureninase -0.0345442
MAML2 mastermind-like 2 (Drosophila) -0.0341631
SSH2 slingshot protein phosphatase 2 -0.0338105
PTPRG protein tyrosine phosphatase, receptor type, G -0.0337432
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0337327
PGK1 phosphoglycerate kinase 1 -0.0331943
CAVIN1 caveolae associated protein 1 -0.032758
KLF7 Kruppel-like factor 7 (ubiquitous) -0.0321839
NRP2 neuropilin 2 -0.0321355
NLGN1 neuroligin 1 -0.0317594
ERBIN erbb2 interacting protein -0.0316366
CDK17 cyclin-dependent kinase 17 -0.0314604
SDCCAG8 serologically defined colon cancer antigen 8 -0.0313365
NSD2 nuclear receptor binding SET domain protein 2 -0.0311007
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0308779
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0308297
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0301845
RPS25 ribosomal protein S25 -0.0301491
TMEM123 transmembrane protein 123 -0.0298185
ADAM19 ADAM metallopeptidase domain 19 -0.0294879
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0293341
PICALM phosphatidylinositol binding clathrin assembly protein -0.0293028
RPL36A ribosomal protein L36a -0.0291797
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0288919
MBNL1 muscleblind-like splicing regulator 1 -0.0284001
ACTR2 ARP2 actin-related protein 2 homolog (yeast) -0.0282562
SENP6 SUMO1/sentrin specific peptidase 6 -0.0281037
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0279287
IFI16 interferon, gamma-inducible protein 16 -0.0269461
COL6A1 collagen, type VI, alpha 1 -0.0269334
DOCK4 dedicator of cytokinesis 4 -0.0267678
SCRN1 secernin 1 -0.0267231
EMP1 epithelial membrane protein 1 -0.0265795
NRP1 neuropilin 1 -0.0265443
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0264517
MSN moesin -0.0263728