SBI-0640756_NCI-H2122 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description SBI-0640756 perturbation in NCI-H2122 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the SBI-0640756_NCI-H2122 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PDE4D phosphodiesterase 4D, cAMP-specific 0.0928706
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.060434
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide 0.0543158
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0533629
KRT17 keratin 17, type I 0.0519126
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0473222
KYNU kynureninase 0.0455294
SBF2 SET binding factor 2 0.0429587
ELL2 elongation factor, RNA polymerase II, 2 0.042915
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0428138
CATSPERB catsper channel auxiliary subunit beta 0.0376742
PDE10A phosphodiesterase 10A 0.0370097
CA12 carbonic anhydrase XII 0.0368052
PDE3A phosphodiesterase 3A, cGMP-inhibited 0.0365775
MYO1E myosin IE 0.036543
GPBP1 GC-rich promoter binding protein 1 0.0342773
BCAR3 breast cancer anti-estrogen resistance 3 0.0338337
EGR1 early growth response 1 0.0334618
PATJ PATJ crumbs cell polarity complex component 0.0332481
ATRX alpha thalassemia/mental retardation syndrome X-linked 0.0321202
FMNL2 formin-like 2 0.0320438
FHIT fragile histidine triad 0.0315978
SNX9 sorting nexin 9 0.0312939
PNISR PNN-interacting serine/arginine-rich protein 0.0310447
RPL12 ribosomal protein L12 0.0310447
ATF6 activating transcription factor 6 0.0308672
DSPP dentin sialophosphoprotein 0.0302828
TJP1 tight junction protein 1 0.0302185
SREK1 splicing regulatory glutamine/lysine-rich protein 1 0.0301996
SLC6A14 solute carrier family 6 (amino acid transporter), member 14 0.0301677
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 0.0301653
KIF5B kinesin family member 5B 0.0301431
CLIP1 CAP-GLY domain containing linker protein 1 0.029814
PHLDB2 pleckstrin homology-like domain, family B, member 2 0.0298048
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.029551
GON4L gon-4-like (C. elegans) 0.0292679
PPP2R2C protein phosphatase 2, regulatory subunit B, gamma 0.0289376
GTF2IRD1 GTF2I repeat domain containing 1 0.0287407
ABI1 abl-interactor 1 0.0285488
CCDC6 coiled-coil domain containing 6 0.0285481
CAPZB capping protein (actin filament) muscle Z-line, beta 0.028214
PAFAH1B1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa) 0.0281936
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0277217
RPS27A ribosomal protein S27a 0.0275502
HOOK3 hook microtubule-tethering protein 3 0.0271512
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.0270586
FEZ2 fasciculation and elongation protein zeta 2 (zygin II) 0.0266444
IFI6 interferon, alpha-inducible protein 6 0.0264686
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0263141
ZFYVE16 zinc finger, FYVE domain containing 16 0.0263103
LDHA lactate dehydrogenase A 0.0262713
RPS27L ribosomal protein S27-like 0.0261172
CXCL8 chemokine (C-X-C motif) ligand 8 0.0259422
SOS1 son of sevenless homolog 1 (Drosophila) 0.0259168
CPEB4 cytoplasmic polyadenylation element binding protein 4 0.0259126
CSNK2A2 casein kinase 2, alpha prime polypeptide 0.025753
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 0.025644
TRAPPC9 trafficking protein particle complex 9 0.02541
XPO1 exportin 1 0.0254075
RSRC2 arginine/serine-rich coiled-coil 2 0.025407
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 0.0253264
HMGA2 high mobility group AT-hook 2 0.0252258
VMP1 vacuole membrane protein 1 0.0244923
PARD3 par-3 family cell polarity regulator 0.0244296
BLTP1 bridge-like lipid transfer protein family member 1 0.0243735
BRIP1 BRCA1 interacting protein C-terminal helicase 1 0.0243412
UBXN4 UBX domain protein 4 0.0241605
RPS6 ribosomal protein S6 0.0239727
STC1 stanniocalcin 1 0.0238399
RPL4 ribosomal protein L4 0.0236706
USP8 ubiquitin specific peptidase 8 0.0236405
CEACAM6 carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen) 0.0236315
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 0.023303
MTAP methylthioadenosine phosphorylase 0.0228081
PRPF4B pre-mRNA processing factor 4B 0.0226197
ZKSCAN1 zinc finger with KRAB and SCAN domains 1 0.0225993
ACTN4 actinin, alpha 4 0.022553
ATOSA atos homolog A 0.0223731
NLGN1 neuroligin 1 0.0222899
MAP3K20 mitogen-activated protein kinase kinase kinase 20 0.0222267
ARPC5 actin related protein 2/3 complex, subunit 5, 16kDa 0.02193
SPG11 spastic paraplegia 11 (autosomal recessive) 0.021921
RPL28 ribosomal protein L28 0.0219143
GPHN gephyrin 0.0219011
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.02182
RSL24D1 ribosomal L24 domain containing 1 0.0217632
PTPRG protein tyrosine phosphatase, receptor type, G 0.0217585
SET SET nuclear proto-oncogene 0.0217415
RPTOR regulatory associated protein of MTOR, complex 1 0.0215959
SUPT6H suppressor of Ty 6 homolog (S. cerevisiae) 0.0215616
AUTS2 autism susceptibility candidate 2 0.0213769
ATP2C2 ATPase, Ca++ transporting, type 2C, member 2 0.021355
TLN1 talin 1 0.021218
VPS13B vacuolar protein sorting 13 homolog B (yeast) 0.0212114
VCL vinculin 0.0211477
PCNX4 pecanex 4 0.0210428
DDIT4 DNA-damage-inducible transcript 4 0.0210344
FBXO32 F-box protein 32 0.0210043
OXSR1 oxidative stress responsive 1 0.0209911
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0208803

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0884754
NDRG1 N-myc downstream regulated 1 -0.082765
MT2A metallothionein 2A -0.0575976
PRKCA protein kinase C, alpha -0.0550301
FNDC3B fibronectin type III domain containing 3B -0.050854
ESYT2 extended synaptotagmin-like protein 2 -0.0504642
VIM vimentin -0.0495429
JMJD1C jumonji domain containing 1C -0.0479208
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0465695
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0459413
MARCHF6 membrane associated ring-CH-type finger 6 -0.0450698
SEC31A SEC31 homolog A (S. cerevisiae) -0.044684
TMSB10 thymosin beta 10 -0.0446707
B2M beta-2-microglobulin -0.0407369
PTMA prothymosin, alpha -0.040158
ZNF638 zinc finger protein 638 -0.0386449
S100A10 S100 calcium binding protein A10 -0.0368513
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa -0.0348868
AK1 adenylate kinase 1 -0.034675
NAMPT nicotinamide phosphoribosyltransferase -0.0344089
KRT19 keratin 19, type I -0.0336717
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0333135
RTN4 reticulon 4 -0.0324348
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0321555
GRB10 growth factor receptor-bound protein 10 -0.0320248
SMYD3 SET and MYND domain containing 3 -0.0317522
CALU calumenin -0.0316758
SND1 staphylococcal nuclease and tudor domain containing 1 -0.0316301
RPS21 ribosomal protein S21 -0.0315489
TENT5A terminal nucleotidyltransferase 5A -0.0312532
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0310767
RIGI RNA sensor RIG-I -0.030498
RPS19 ribosomal protein S19 -0.0301712
LIMA1 LIM domain and actin binding 1 -0.0301657
TPT1 tumor protein, translationally-controlled 1 -0.0298804
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0293057
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0292726
RPL35A ribosomal protein L35a -0.0289368
RAB7A RAB7A, member RAS oncogene family -0.0278996
TM4SF1 transmembrane 4 L six family member 1 -0.0275078
APP amyloid beta (A4) precursor protein -0.0273249
PAN3 PAN3 poly(A) specific ribonuclease subunit -0.0271937
ZMYND8 zinc finger, MYND-type containing 8 -0.0267591
STAU1 staufen double-stranded RNA binding protein 1 -0.0266749
CNNM2 cyclin and CBS domain divalent metal cation transport mediator 2 -0.0266556
ARHGAP12 Rho GTPase activating protein 12 -0.0264818
TMEM165 transmembrane protein 165 -0.0264763
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0264629
UBC ubiquitin C -0.0263713
ADAM17 ADAM metallopeptidase domain 17 -0.0263367
SFTPA2 surfactant protein A2 -0.0263155
RPL11 ribosomal protein L11 -0.0263018
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0261694
ANKRD12 ankyrin repeat domain 12 -0.0258894
ZNFX1 zinc finger, NFX1-type containing 1 -0.0258095
RPS3 ribosomal protein S3 -0.0257348
ARHGAP21 Rho GTPase activating protein 21 -0.0256721
RAB22A RAB22A, member RAS oncogene family -0.025408
KANSL1 KAT8 regulatory NSL complex subunit 1 -0.0251317
IBTK inhibitor of Bruton agammaglobulinemia tyrosine kinase -0.0250655
KMT2A lysine (K)-specific methyltransferase 2A -0.0247297
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 -0.0246647
NUMB numb homolog (Drosophila) -0.0245756
PPP2R5E protein phosphatase 2, regulatory subunit B', epsilon isoform -0.0245635
RPLP1 ribosomal protein, large, P1 -0.0245612
PTEN phosphatase and tensin homolog -0.0244348
CD44 CD44 molecule (Indian blood group) -0.0243583
PHF3 PHD finger protein 3 -0.0241946
NAP1L1 nucleosome assembly protein 1-like 1 -0.0239714
ENO1 enolase 1, (alpha) -0.0238124
KMT2C lysine (K)-specific methyltransferase 2C -0.023739
SEC23A Sec23 homolog A (S. cerevisiae) -0.0235091
KPNA4 karyopherin alpha 4 (importin alpha 3) -0.0231877
TBC1D22A TBC1 domain family, member 22A -0.0231389
YTHDC1 YTH domain containing 1 -0.0229903
RASA2 RAS p21 protein activator 2 -0.0226767
BBX bobby sox homolog (Drosophila) -0.0225221
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0225131
UBE2H ubiquitin-conjugating enzyme E2H -0.0223354
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0221049
RNF149 ring finger protein 149 -0.0221019
MPZL1 myelin protein zero-like 1 -0.0219275
METTL15 methyltransferase like 15 -0.021866
TMSB4X thymosin beta 4, X-linked -0.0217378
RPS11 ribosomal protein S11 -0.0215663
MNAT1 MNAT CDK-activating kinase assembly factor 1 -0.0215591
UBE3C ubiquitin protein ligase E3C -0.021405
ZBTB43 zinc finger and BTB domain containing 43 -0.0212845
OGA O-GlcNAcase -0.0209101
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0209006
FOXJ3 forkhead box J3 -0.0207309
DSCAM Down syndrome cell adhesion molecule -0.0205824
SRPK2 SRSF protein kinase 2 -0.020421
UMAD1 UBAP1-MVB12-associated (UMA) domain containing 1 -0.0203541
ITCH itchy E3 ubiquitin protein ligase -0.0202373
KIF13A kinesin family member 13A -0.0201741
PKM pyruvate kinase, muscle -0.0201735
PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 -0.0201435
UBE2O ubiquitin-conjugating enzyme E2O -0.019801
RPRD2 regulation of nuclear pre-mRNA domain containing 2 -0.0194886