SBI-0640756_SNU-1 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description SBI-0640756 perturbation in SNU-1 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the SBI-0640756_SNU-1 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
ENO2 enolase 2 (gamma, neuronal) 0.0676605
GOLGA4 golgin A4 0.0588282
RPS12 ribosomal protein S12 0.0465483
ANKRD12 ankyrin repeat domain 12 0.0448369
FTL ferritin, light polypeptide 0.0418507
RPS3 ribosomal protein S3 0.0388016
PRRC2C proline-rich coiled-coil 2C 0.0371249
AKAP9 A kinase (PRKA) anchor protein 9 0.0353513
SDK1 sidekick cell adhesion molecule 1 0.0336416
ANK2 ankyrin 2, neuronal 0.0333052
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0314461
FAF1 Fas (TNFRSF6) associated factor 1 0.029069
APLP2 amyloid beta (A4) precursor-like protein 2 0.0282672
MBD5 methyl-CpG binding domain protein 5 0.0273155
BACH2 BTB and CNC homology 1, basic leucine zipper transcription factor 2 0.0266013
GARS1 glycyl-tRNA synthetase 1 0.0259494
RPL13A ribosomal protein L13a 0.0254906
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0251032
EIF2S2 eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa 0.0246701
CTNND1 catenin (cadherin-associated protein), delta 1 0.024474
GYS1 glycogen synthase 1 (muscle) 0.0231316
SP100 SP100 nuclear antigen 0.0226973
RPL4 ribosomal protein L4 0.0226154
RPL37A ribosomal protein L37a 0.022405
ANKRD11 ankyrin repeat domain 11 0.0222861
HDAC9 histone deacetylase 9 0.0222758
GCC2 GRIP and coiled-coil domain containing 2 0.0218552
TTC3 tetratricopeptide repeat domain 3 0.0214614
MED13L mediator complex subunit 13-like 0.021393
ID3 inhibitor of DNA binding 3, dominant negative helix-loop-helix protein 0.0208269
PSAT1 phosphoserine aminotransferase 1 0.0208248
WNK1 WNK lysine deficient protein kinase 1 0.0201337
ANKHD1 ankyrin repeat and KH domain containing 1 0.0199284
RAB6A RAB6A, member RAS oncogene family 0.0197621
ERC1 ELKS/RAB6-interacting/CAST family member 1 0.0197313
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0193204
AHI1 Abelson helper integration site 1 0.0192666
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.019192
THOC2 THO complex 2 0.0191531
RALGAPA2 Ral GTPase activating protein, alpha subunit 2 (catalytic) 0.0190169
TCF12 transcription factor 12 0.0189674
UBXN4 UBX domain protein 4 0.0188474
AKAP12 A kinase (PRKA) anchor protein 12 0.0188343
EPB41 erythrocyte membrane protein band 4.1 0.0185057
RPL36 ribosomal protein L36 0.0183294
BOD1L1 biorientation of chromosomes in cell division 1-like 1 0.0182172
ALMS1 Alstrom syndrome protein 1 0.0181237
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0180524
RIC1 RAB6A GEF complex partner 1 0.0178388
NUP58 nucleoporin 58 0.0177372
WSB1 WD repeat and SOCS box containing 1 0.0177341
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0175776
TET2 tet methylcytosine dioxygenase 2 0.0171755
PDE7A phosphodiesterase 7A 0.0170906
FAM162A family with sequence similarity 162, member A 0.0170884
NAMPT nicotinamide phosphoribosyltransferase 0.0170602
MEF2A myocyte enhancer factor 2A 0.0170362
AP2B1 adaptor-related protein complex 2, beta 1 subunit 0.0170327
UIMC1 ubiquitin interaction motif containing 1 0.0170126
NACA nascent polypeptide-associated complex alpha subunit 0.0169936
ADGRA3 adhesion G protein-coupled receptor A3 0.0169754
METTL15 methyltransferase like 15 0.0169411
PER1 period circadian clock 1 0.0167606
KDELR1 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1 0.0165773
SOS1 son of sevenless homolog 1 (Drosophila) 0.0164684
TMF1 TATA element modulatory factor 1 0.0163961
GOSR2 golgi SNAP receptor complex member 2 0.0163683
PELP1 proline, glutamate and leucine rich protein 1 0.0163061
DOCK4 dedicator of cytokinesis 4 0.0162113
MYO19 myosin XIX 0.0161103
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0160579
CMIP c-Maf inducing protein 0.01602
SYF2 SYF2 pre-mRNA-splicing factor 0.0159957
PATJ PATJ crumbs cell polarity complex component 0.015995
MAP2K1 mitogen-activated protein kinase kinase 1 0.0159188
RPL17-C18ORF32 RPL17-C18orf32 readthrough 0.0158148
DDIT4 DNA-damage-inducible transcript 4 0.0156874
SET SET nuclear proto-oncogene 0.0156838
JMJD1C jumonji domain containing 1C 0.0155832
ERBIN erbb2 interacting protein 0.0155108
PTK2 protein tyrosine kinase 2 0.0154902
RYBP RING1 and YY1 binding protein 0.0154593
IGF2R insulin-like growth factor 2 receptor 0.0153744
NFE2L1 nuclear factor, erythroid 2-like 1 0.0152719
GIGYF2 GRB10 interacting GYF protein 2 0.0152262
OTUD7B OTU deubiquitinase 7B 0.0151742
UBA6 ubiquitin-like modifier activating enzyme 6 0.0151061
GPT2 glutamic pyruvate transaminase (alanine aminotransferase) 2 0.0150128
PALS2 protein associated with LIN7 2, MAGUK p55 family member 0.014994
CXCL8 chemokine (C-X-C motif) ligand 8 0.0149852
PTEN phosphatase and tensin homolog 0.0149627
UBE2E1 ubiquitin-conjugating enzyme E2E 1 0.0149558
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 0.0148898
MTREX Mtr4 exosome RNA helicase 0.0148497
RPS18 ribosomal protein S18 0.0147127
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 0.0146931
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0146454
INSIG1 insulin induced gene 1 0.0145866
CRYBG3 beta-gamma crystallin domain containing 3 0.0145315
EIF5B eukaryotic translation initiation factor 5B 0.0144901

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.324145
AHNAK AHNAK nucleoprotein -0.189622
VCL vinculin -0.123677
CPED1 cadherin-like and PC-esterase domain containing 1 -0.118156
PTMA prothymosin, alpha -0.11417
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.104442
ADAM10 ADAM metallopeptidase domain 10 -0.102894
B3GALT1 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 -0.0967391
PDE4B phosphodiesterase 4B, cAMP-specific -0.0967346
EGFR epidermal growth factor receptor -0.0934801
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa -0.0904183
TPT1 tumor protein, translationally-controlled 1 -0.0880024
TMSB4X thymosin beta 4, X-linked -0.0875042
BMP10 bone morphogenetic protein 10 -0.0834515
ZEB1 zinc finger E-box binding homeobox 1 -0.0814044
TNFRSF11B tumor necrosis factor receptor superfamily, member 11b -0.077193
DLG1 discs, large homolog 1 (Drosophila) -0.0754161
EML4 echinoderm microtubule associated protein like 4 -0.0728505
TJP1 tight junction protein 1 -0.0727217
GLI3 GLI family zinc finger 3 -0.0725625
PKM pyruvate kinase, muscle -0.0704085
PDE4D phosphodiesterase 4D, cAMP-specific -0.0641547
ACTG1 actin gamma 1 -0.0627962
GLI2 GLI family zinc finger 2 -0.0625235
ECT2 epithelial cell transforming 2 -0.0625038
NPAS2 neuronal PAS domain protein 2 -0.0619454
ANXA1 annexin A1 -0.0617903
SLC38A2 solute carrier family 38, member 2 -0.0610758
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0608161
MYO5C myosin VC -0.0601414
CYB5B cytochrome b5 type B (outer mitochondrial membrane) -0.0578442
FLNB filamin B, beta -0.0575429
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 -0.0560418
DPYD dihydropyrimidine dehydrogenase -0.0555328
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0553954
NCEH1 neutral cholesterol ester hydrolase 1 -0.0551859
NBEA neurobeachin -0.0545051
RHOA ras homolog family member A -0.0532952
MKI67 marker of proliferation Ki-67 -0.0526941
LPP LIM domain containing preferred translocation partner in lipoma -0.0514332
EZR ezrin -0.0491035
RPL34 ribosomal protein L34 -0.0486855
ARL4C ADP-ribosylation factor-like 4C -0.0475181
RPL7A ribosomal protein L7a -0.0464754
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0464738
CACNB4 calcium channel, voltage-dependent, beta 4 subunit -0.0454798
EBNA1BP2 EBNA1 binding protein 2 -0.0450067
S100A10 S100 calcium binding protein A10 -0.0434619
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) -0.0422346
FOXP1 forkhead box P1 -0.0416226
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0416222
TRERF1 transcriptional regulating factor 1 -0.0408606
ANLN anillin, actin binding protein -0.0408282
EEF2 eukaryotic translation elongation factor 2 -0.0404841
CENPE centromere protein E, 312kDa -0.0401857
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0400688
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0399398
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 -0.0398688
MICAL2 microtubule associated monooxygenase, calponin and LIM domain containing 2 -0.0394346
MYOF myoferlin -0.0391924
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0386556
CCND1 cyclin D1 -0.0376461
CENPF centromere protein F, 350/400kDa -0.0369681
BMP2K BMP2 inducible kinase -0.036364
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0358357
EFNA5 ephrin-A5 -0.0356633
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0354524
TTC28 tetratricopeptide repeat domain 28 -0.035271
SMNDC1 survival motor neuron domain containing 1 -0.0351657
HSPB1 heat shock 27kDa protein 1 -0.0349597
SMC4 structural maintenance of chromosomes 4 -0.0347523
LDHA lactate dehydrogenase A -0.0347455
HSPH1 heat shock 105kDa/110kDa protein 1 -0.0347323
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0346679
ALDH3A2 aldehyde dehydrogenase 3 family, member A2 -0.0345511
EVI5 ecotropic viral integration site 5 -0.03434
GALNT5 polypeptide N-acetylgalactosaminyltransferase 5 -0.0343113
HSPA8 heat shock 70kDa protein 8 -0.0338889
MINDY2 MINDY lysine 48 deubiquitinase 2 -0.0335767
PDE7B phosphodiesterase 7B -0.0331827
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 -0.0325899
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0324781
POTEF POTE ankyrin domain family, member F -0.0322256
TPX2 TPX2, microtubule-associated -0.0319135
RPS25 ribosomal protein S25 -0.0318698
HJURP Holliday junction recognition protein -0.0316663
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0316017
PPM1L protein phosphatase, Mg2+/Mn2+ dependent, 1L -0.0314798
RPS8 ribosomal protein S8 -0.0314116
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0313607
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 -0.0313422
RTN4 reticulon 4 -0.0310906
DIAPH3 diaphanous-related formin 3 -0.0309092
SLC1A3 solute carrier family 1 (glial high affinity glutamate transporter), member 3 -0.030897
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) -0.0307643
MBNL1 muscleblind-like splicing regulator 1 -0.0307294
IRF2BP2 interferon regulatory factor 2 binding protein 2 -0.0297762
SPTAN1 spectrin, alpha, non-erythrocytic 1 -0.029588
PRELID2 PRELI domain containing 2 -0.029543
S100A9 S100 calcium binding protein A9 -0.0294307