SBI-0640756_SNU-423 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description SBI-0640756 perturbation in SNU-423 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the SBI-0640756_SNU-423 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.142859
STC1 stanniocalcin 1 0.126413
RPS12 ribosomal protein S12 0.109322
GPC6 glypican 6 0.101037
FTL ferritin, light polypeptide 0.0900329
VIM vimentin 0.0852128
OGA O-GlcNAcase 0.0798333
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0735212
PLIN2 perilipin 2 0.071789
LDHA lactate dehydrogenase A 0.0599081
DDIT4 DNA-damage-inducible transcript 4 0.05884
MXI1 MAX interactor 1, dimerization protein 0.0559077
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0552941
ANKRD1 ankyrin repeat domain 1 (cardiac muscle) 0.0552693
BRD2 bromodomain containing 2 0.0550944
RPS3 ribosomal protein S3 0.0543345
PGK1 phosphoglycerate kinase 1 0.0534839
NDRG1 N-myc downstream regulated 1 0.051603
ENO1 enolase 1, (alpha) 0.0510353
AKAP12 A kinase (PRKA) anchor protein 12 0.0508288
IGFBP3 insulin-like growth factor binding protein 3 0.049564
RPL37A ribosomal protein L37a 0.0481567
ZNF292 zinc finger protein 292 0.0455967
PTMA prothymosin, alpha 0.0445222
ANKRD11 ankyrin repeat domain 11 0.0418328
GOLGA4 golgin A4 0.04089
HLA-A major histocompatibility complex, class I, A 0.0407885
SRRM2 serine/arginine repetitive matrix 2 0.0407877
AKAP9 A kinase (PRKA) anchor protein 9 0.0406069
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0404545
MAP1B microtubule-associated protein 1B 0.0401863
IGF2R insulin-like growth factor 2 receptor 0.0396584
G0S2 G0/G1 switch 2 0.0391305
STC2 stanniocalcin 2 0.038307
ENO2 enolase 2 (gamma, neuronal) 0.0382414
GARS1 glycyl-tRNA synthetase 1 0.0380143
SH3KBP1 SH3-domain kinase binding protein 1 0.0377152
PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 0.0376269
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0370307
APLP2 amyloid beta (A4) precursor-like protein 2 0.0364433
PHF21A PHD finger protein 21A 0.0361115
WSB1 WD repeat and SOCS box containing 1 0.0351257
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0348302
PRRC2C proline-rich coiled-coil 2C 0.0348157
TLN1 talin 1 0.0345908
EIF1 eukaryotic translation initiation factor 1 0.0345644
IFI16 interferon, gamma-inducible protein 16 0.0342652
RPL4 ribosomal protein L4 0.0338427
RAI1 retinoic acid induced 1 0.0338359
HGS hepatocyte growth factor-regulated tyrosine kinase substrate 0.0330993
ELL2 elongation factor, RNA polymerase II, 2 0.0325733
TOP1 topoisomerase (DNA) I 0.0320404
EZR ezrin 0.0320132
GNAS GNAS complex locus 0.0313756
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0310082
NAP1L1 nucleosome assembly protein 1-like 1 0.0301086
IGFN1 immunoglobulin-like and fibronectin type III domain containing 1 0.029641
ERRFI1 ERBB receptor feedback inhibitor 1 0.0296395
ARFGEF3 ARFGEF family member 3 0.0294902
DEPP1 DEPP autophagy regulator 1 0.0289397
SPAG9 sperm associated antigen 9 0.0287538
PTPRF protein tyrosine phosphatase, receptor type, F 0.0287238
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0282621
KTN1 kinectin 1 (kinesin receptor) 0.0281444
RPL13A ribosomal protein L13a 0.0280314
CLIP1 CAP-GLY domain containing linker protein 1 0.0278732
ZFP36L1 ZFP36 ring finger protein-like 1 0.0277516
CDCP1 CUB domain containing protein 1 0.0276666
ASPH aspartate beta-hydroxylase 0.0274032
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0273262
RBM25 RNA binding motif protein 25 0.0271716
ANKRD12 ankyrin repeat domain 12 0.0270683
NFE2L1 nuclear factor, erythroid 2-like 1 0.0269655
ATF4 activating transcription factor 4 0.0268303
ERC2 ELKS/RAB6-interacting/CAST family member 2 0.0266901
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0266023
SET SET nuclear proto-oncogene 0.0261935
ARID5B AT rich interactive domain 5B (MRF1-like) 0.0257581
DTNA dystrobrevin, alpha 0.0255558
TPM3 tropomyosin 3 0.0252159
SMAP1 small ArfGAP 1 0.0251859
PCLO piccolo presynaptic cytomatrix protein 0.0251298
SEPTIN7 septin 7 0.0250962
SYNJ2 synaptojanin 2 0.0248646
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0247165
OSBPL8 oxysterol binding protein-like 8 0.0246919
HMGN2 high mobility group nucleosomal binding domain 2 0.024655
RAB7A RAB7A, member RAS oncogene family 0.0246206
MARCHF1 membrane associated ring-CH-type finger 1 0.0245337
INSIG1 insulin induced gene 1 0.0244844
RPL12 ribosomal protein L12 0.024148
SESN2 sestrin 2 0.023899
AFDN afadin, adherens junction formation factor 0.0234963
DDIT3 DNA-damage-inducible transcript 3 0.0234693
RPL5 ribosomal protein L5 0.0231496
FRMPD4 FERM and PDZ domain containing 4 0.0228768
RACK1 receptor for activated C kinase 1 0.0228703
MATR3 matrin 3 0.0228317
KMT2C lysine (K)-specific methyltransferase 2C 0.0226278
SON SON DNA binding protein 0.0222911

decreased expression

Symbol Name Standardized Value
FN1 fibronectin 1 -0.182478
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.179491
SOD2 superoxide dismutase 2, mitochondrial -0.169181
FRMD4A FERM domain containing 4A -0.165419
VCL vinculin -0.115822
SMAD3 SMAD family member 3 -0.0897865
BICC1 BicC family RNA binding protein 1 -0.0852867
FNDC3B fibronectin type III domain containing 3B -0.0766905
GLIS3 GLIS family zinc finger 3 -0.0755177
GRIN2A glutamate receptor, ionotropic, N-methyl D-aspartate 2A -0.0744443
EDIL3 EGF-like repeats and discoidin I-like domains 3 -0.0664902
COL6A3 collagen, type VI, alpha 3 -0.0627847
TNS3 tensin 3 -0.060653
EXT1 exostosin glycosyltransferase 1 -0.059898
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0577026
TPT1 tumor protein, translationally-controlled 1 -0.0537106
AHNAK AHNAK nucleoprotein -0.0528892
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0514273
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0509284
RPS24 ribosomal protein S24 -0.0500942
VEGFA vascular endothelial growth factor A -0.0495515
TMSB10 thymosin beta 10 -0.0483436
MAML2 mastermind-like 2 (Drosophila) -0.0478059
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0466849
UBC ubiquitin C -0.0456002
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 -0.0451075
CADM1 cell adhesion molecule 1 -0.0448868
HMGA2 high mobility group AT-hook 2 -0.0441242
ACTG1 actin gamma 1 -0.0439951
COL1A2 collagen, type I, alpha 2 -0.0436503
RPS23 ribosomal protein S23 -0.0434447
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0427034
PTPRK protein tyrosine phosphatase, receptor type, K -0.0408299
VMP1 vacuole membrane protein 1 -0.0397198
KYNU kynureninase -0.0394985
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0394539
DPYD dihydropyrimidine dehydrogenase -0.0392043
THBS1 thrombospondin 1 -0.0389442
ATXN1 ataxin 1 -0.0384706
PRR16 proline rich 16 -0.0377212
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 -0.03702
ADAM12 ADAM metallopeptidase domain 12 -0.0365397
EGFR epidermal growth factor receptor -0.0362483
RPL36A ribosomal protein L36a -0.0357796
CASK calcium/calmodulin-dependent serine protein kinase (MAGUK family) -0.0356341
NAV2 neuron navigator 2 -0.0355323
ZBTB38 zinc finger and BTB domain containing 38 -0.0349529
IQCJ-SCHIP1 IQCJ-SCHIP1 readthrough -0.0345191
NAV1 neuron navigator 1 -0.0343003
RPLP0 ribosomal protein, large, P0 -0.0338452
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0336681
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 -0.0335581
PTPN14 protein tyrosine phosphatase, non-receptor type 14 -0.03346
UBE2H ubiquitin-conjugating enzyme E2H -0.0324049
MACF1 microtubule-actin crosslinking factor 1 -0.0322905
SRGN serglycin -0.0320802
TENT5A terminal nucleotidyltransferase 5A -0.0313578
PARD3 par-3 family cell polarity regulator -0.03117
FOXP1 forkhead box P1 -0.0310165
IL6 interleukin 6 -0.0308968
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 -0.0304979
ZFAND3 zinc finger, AN1-type domain 3 -0.0298026
MBNL1 muscleblind-like splicing regulator 1 -0.0296946
RPL23 ribosomal protein L23 -0.0294437
COL1A1 collagen, type I, alpha 1 -0.0292676
FAM20C family with sequence similarity 20, member C -0.0288748
UGCG UDP-glucose ceramide glucosyltransferase -0.0287598
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0277935
CTSD cathepsin D -0.0277452
MYOF myoferlin -0.0273956
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0273476
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0273058
EXOC4 exocyst complex component 4 -0.0272304
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 -0.0270383
DIAPH2 diaphanous-related formin 2 -0.0267941
HLA-E major histocompatibility complex, class I, E -0.0265705
LOXL2 lysyl oxidase-like 2 -0.0265323
PTK2 protein tyrosine kinase 2 -0.0262989
AKT3 v-akt murine thymoma viral oncogene homolog 3 -0.0259369
EEF2 eukaryotic translation elongation factor 2 -0.0258862
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 -0.0258346
TAPBP TAP binding protein (tapasin) -0.0256466
SLC35F3 solute carrier family 35, member F3 -0.0256316
BIRC3 baculoviral IAP repeat containing 3 -0.0251624
QKI QKI, KH domain containing, RNA binding -0.0246522
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0246484
TNIP1 TNFAIP3 interacting protein 1 -0.0245499
CNOT1 CCR4-NOT transcription complex, subunit 1 -0.0245279
RPS10 ribosomal protein S10 -0.0245215
ARRDC3 arrestin domain containing 3 -0.0244959
PAPPA pregnancy-associated plasma protein A, pappalysin 1 -0.0244709
TUBB tubulin, beta class I -0.024161
ITCH itchy E3 ubiquitin protein ligase -0.024052
ASTN2 astrotactin 2 -0.0239917
AFF4 AF4/FMR2 family, member 4 -0.0237754
MSN moesin -0.0237388
FMNL2 formin-like 2 -0.0236707
ZMYND8 zinc finger, MYND-type containing 8 -0.0235844
UTRN utrophin -0.0234793
WTAP Wilms tumor 1 associated protein -0.0234647