SCC-4 Gene Set

Dataset Sanger Dependency Map Cancer Cell Line Proteomics
Category proteomics
Type cell line
Description cell line derived from Oral Cavity Carcinoma Tumour (Cell Model Passports, SIDM01081)
External Link https://cellmodelpassports.sanger.ac.uk/passports/SIDM01081
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Genes

198 proteins associated with the cell line SCC-4 from the Sanger Dependency Map Cancer Cell Line Proteomics dataset.

Symbol Name
ABAT 4-aminobutyrate aminotransferase
ABHD14B abhydrolase domain containing 14B
ACSL3 acyl-CoA synthetase long-chain family member 3
AGRN agrin
ALCAM activated leukocyte cell adhesion molecule
APOLD1 apolipoprotein L domain containing 1
BET1 Bet1 golgi vesicular membrane trafficking protein
C3 complement component 3
CALR calreticulin
CANX calnexin
CARS2 cysteinyl-tRNA synthetase 2, mitochondrial (putative)
CCSER2 coiled-coil serine-rich protein 2
CD47 CD47 molecule
CDYL chromodomain protein, Y-like
CLDN1 claudin 1
CLDN7 claudin 7
COA3 cytochrome c oxidase assembly factor 3
COG2 component of oligomeric golgi complex 2
COL17A1 collagen, type XVII, alpha 1
COPS2 COP9 signalosome subunit 2
COX16 COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)
CTNNA2 catenin (cadherin-associated protein), alpha 2
CYB5R3 cytochrome b5 reductase 3
DCP1A decapping mRNA 1A
DHCR7 7-dehydrocholesterol reductase
DNAJB11 DnaJ (Hsp40) homolog, subfamily B, member 11
EGFR epidermal growth factor receptor
EMD emerin
FUNDC2 FUN14 domain containing 2
GBP5 guanylate binding protein 5
GLRX5 glutaredoxin 5
GLUD1 glutamate dehydrogenase 1
GM2A GM2 ganglioside activator
GOLGA5 golgin A5
GTF3C5 general transcription factor IIIC, polypeptide 5, 63kDa
HMG20A high mobility group 20A
HMGA2 high mobility group AT-hook 2
HNRNPUL2 heterogeneous nuclear ribonucleoprotein U-like 2
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)
IFT122 intraflagellar transport 122
INTS7 integrator complex subunit 7
ISCA2 iron-sulfur cluster assembly 2
ITGA6 integrin, alpha 6
JAM3 junctional adhesion molecule 3
LAMA3 laminin, alpha 3
LAMA5 laminin, alpha 5
LAMB3 laminin, beta 3
LAMC2 laminin, gamma 2
LPCAT4 lysophosphatidylcholine acyltransferase 4
LRCH4 leucine-rich repeats and calponin homology (CH) domain containing 4
LYSMD2 LysM, putative peptidoglycan-binding, domain containing 2
MGME1 mitochondrial genome maintenance exonuclease 1
MPRIP myosin phosphatase Rho interacting protein
MTPAP mitochondrial poly(A) polymerase
MYO1B myosin IB
MYOF myoferlin
NAA15 N(alpha)-acetyltransferase 15, NatA auxiliary subunit
NEO1 neogenin 1
NSDHL NAD(P) dependent steroid dehydrogenase-like
NUMA1 nuclear mitotic apparatus protein 1
OGDH oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)
ORC3 origin recognition complex, subunit 3
OS9 osteosarcoma amplified 9, endoplasmic reticulum lectin
PDCD6 programmed cell death 6
PDIA3 protein disulfide isomerase family A, member 3
PDIA6 protein disulfide isomerase family A, member 6
PET100 PET100 homolog (S. cerevisiae)
PI4KB phosphatidylinositol 4-kinase, catalytic, beta
PIGBOS1 PIGB opposite strand 1
PLEKHG3 pleckstrin homology domain containing, family G (with RhoGef domain) member 3
PNKD paroxysmal nonkinesigenic dyskinesia
PPIF peptidylprolyl isomerase F
PPP5C protein phosphatase 5, catalytic subunit
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)
RAB1B RAB1B, member RAS oncogene family
RAB6A RAB6A, member RAS oncogene family
RAI14 retinoic acid induced 14
RAP2B RAP2B, member of RAS oncogene family
RPN1 ribophorin I
SCUBE1 signal peptide, CUB domain, EGF-like 1
SDC4 syndecan 4
SLC16A1 solute carrier family 16 (monocarboxylate transporter), member 1
SNAP23 synaptosomal-associated protein, 23kDa
SNRNP27 small nuclear ribonucleoprotein 27kDa (U4/U6.U5)
SOD1 superoxide dismutase 1, soluble
SRGAP2 SLIT-ROBO Rho GTPase activating protein 2
SUN5 Sad1 and UNC84 domain containing 5
SUZ12 SUZ12 polycomb repressive complex 2 subunit
TACSTD2 tumor-associated calcium signal transducer 2
TMED10 transmembrane emp24-like trafficking protein 10 (yeast)
TMEM214 transmembrane protein 214
TMOD1 tropomodulin 1
TMSB4Y thymosin beta 4, Y-linked
TRA2B transformer 2 beta homolog (Drosophila)
TRBV7-6 T cell receptor beta variable 7-6
TSR1 TSR1, 20S rRNA accumulation, homolog (S. cerevisiae)
VN1R110P vomeronasal 1 receptor 110 pseudogene
YRDC yrdC N(6)-threonylcarbamoyltransferase domain containing

Symbol Name
ABCF1 ATP-binding cassette, sub-family F (GCN20), member 1
ACAA2 acetyl-CoA acyltransferase 2
AP3D1 adaptor-related protein complex 3, delta 1 subunit
ARHGAP17 Rho GTPase activating protein 17
ARID1B AT rich interactive domain 1B (SWI1-like)
ARL3 ADP-ribosylation factor-like 3
ATP6V1C1 ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1
ATXN2L ataxin 2-like
BRCA2 breast cancer 2, early onset
C17ORF80 chromosome 17 open reading frame 80
CHMP2A charged multivesicular body protein 2A
CLNS1A chloride channel, nucleotide-sensitive, 1A
CLUH clustered mitochondria (cluA/CLU1) homolog
CNOT1 CCR4-NOT transcription complex, subunit 1
COPS7A COP9 signalosome subunit 7A
CUL3 cullin 3
DDX3X DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked
DDX46 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46
DHX33 DEAH (Asp-Glu-Ala-His) box polypeptide 33
DNM1L dynamin 1-like
EEF1A2 eukaryotic translation elongation factor 1 alpha 2
EIF2S1 eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
EIF3J eukaryotic translation initiation factor 3, subunit J
EML4 echinoderm microtubule associated protein like 4
ETF1 eukaryotic translation termination factor 1
EXOC2 exocyst complex component 2
EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit
FAM114A2 family with sequence similarity 114, member A2
FAM8A1 family with sequence similarity 8, member A1
FARSB phenylalanyl-tRNA synthetase, beta subunit
GAPVD1 GTPase activating protein and VPS9 domains 1
GART phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase
GEMIN6 gem (nuclear organelle) associated protein 6
GIGYF2 GRB10 interacting GYF protein 2
GLCE glucuronic acid epimerase
GPATCH8 G patch domain containing 8
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1
HSF1 heat shock transcription factor 1
IPO7 importin 7
IQGAP2 IQ motif containing GTPase activating protein 2
IRGQ immunity-related GTPase family, Q
KIF5B kinesin family member 5B
KLC2 kinesin light chain 2
LARP4B La ribonucleoprotein domain family, member 4B
LSM1 LSM1, U6 small nuclear RNA associated
LUC7L2 LUC7-like 2 (S. cerevisiae)
MAPK1 mitogen-activated protein kinase 1
MCTS1 malignant T cell amplified sequence 1
MED30 mediator complex subunit 30
METAP2 methionyl aminopeptidase 2
MIR6812 microRNA 6812
NAA25 N(alpha)-acetyltransferase 25, NatB auxiliary subunit
NACA nascent polypeptide-associated complex alpha subunit
NAE1 NEDD8 activating enzyme E1 subunit 1
NOB1 NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)
NOM1 nucleolar protein with MIF4G domain 1
OLA1 Obg-like ATPase 1
PAFAH1B2 platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)
PAFAH1B3 platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)
PCBP1 poly(rC) binding protein 1
PDCD5 programmed cell death 5
PELO pelota homolog (Drosophila)
PEX1 peroxisomal biogenesis factor 1
PPIL4 peptidylprolyl isomerase (cyclophilin)-like 4
PRCC papillary renal cell carcinoma (translocation-associated)
PRKAB1 protein kinase, AMP-activated, beta 1 non-catalytic subunit
PRR12 proline rich 12
PSMC3 proteasome (prosome, macropain) 26S subunit, ATPase, 3
PSMC4 proteasome (prosome, macropain) 26S subunit, ATPase, 4
PSMC5 proteasome (prosome, macropain) 26S subunit, ATPase, 5
PSMC6 proteasome (prosome, macropain) 26S subunit, ATPase, 6
PSMD1 proteasome (prosome, macropain) 26S subunit, non-ATPase, 1
PSMD11 proteasome (prosome, macropain) 26S subunit, non-ATPase, 11
PSMD12 proteasome (prosome, macropain) 26S subunit, non-ATPase, 12
PSMD13 proteasome (prosome, macropain) 26S subunit, non-ATPase, 13
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14
PSMD7 proteasome (prosome, macropain) 26S subunit, non-ATPase, 7
PSMD8 proteasome (prosome, macropain) 26S subunit, non-ATPase, 8
RAB29 RAB29, member RAS oncogene family
RAB3GAP1 RAB3 GTPase activating protein subunit 1 (catalytic)
REPS1 RALBP1 associated Eps domain containing 1
RIC8A RIC8 guanine nucleotide exchange factor A
RPAP1 RNA polymerase II associated protein 1
SART3 squamous cell carcinoma antigen recognized by T cells 3
SEPHS1 selenophosphate synthetase 1
SMC2 structural maintenance of chromosomes 2
SMS spermine synthase
SNAPIN SNAP-associated protein
SUMO2 small ubiquitin-like modifier 2
UBA1 ubiquitin-like modifier activating enzyme 1
UBR4 ubiquitin protein ligase E3 component n-recognin 4
USP14 ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase)
USP24 ubiquitin specific peptidase 24
USP5 ubiquitin specific peptidase 5 (isopeptidase T)
XPO5 exportin 5
XPOT exportin, tRNA
YTHDF2 YTH N(6)-methyladenosine RNA binding protein 2
YY1 YY1 transcription factor
ZNF593 zinc finger protein 593
ZNF598 zinc finger protein 598