SCC-9 Gene Set

Dataset COSMIC Cell Line Gene Mutation Profiles
Category genomics
Type cell line
Description disease: squamous cell carcinoma (Cell Line Ontology, CLO_0008969)
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Genes

337 genes mutated in the SCC-9 cell line from the COSMIC Cell Line Gene Mutation Profiles dataset.

Symbol Name
AADAT aminoadipate aminotransferase
AASDH aminoadipate-semialdehyde dehydrogenase
ABCA3 ATP-binding cassette, sub-family A (ABC1), member 3
ABCC8 ATP-binding cassette, sub-family C (CFTR/MRP), member 8
ACSM2A acyl-CoA synthetase medium-chain family member 2A
ADAMTSL2 ADAMTS-like 2
ADGRE2 adhesion G protein-coupled receptor E2
ADGRF5 adhesion G protein-coupled receptor F5
AFP alpha-fetoprotein
AGAP7P ArfGAP with GTPase domain, ankyrin repeat and PH domain 7, pseudogene
AHNAK AHNAK nucleoprotein
AHNAK2 AHNAK nucleoprotein 2
ALDH1L1 aldehyde dehydrogenase 1 family, member L1
ALG10B ALG10B, alpha-1,2-glucosyltransferase
ANKS1B ankyrin repeat and sterile alpha motif domain containing 1B
AP2B1 adaptor-related protein complex 2, beta 1 subunit
ARHGEF38 Rho guanine nucleotide exchange factor (GEF) 38
ARID2 AT rich interactive domain 2 (ARID, RFX-like)
ASRGL1 asparaginase like 1
ASXL2 additional sex combs like transcriptional regulator 2
ATG2B autophagy related 2B
ATP13A5 ATPase type 13A5
ATP1A2 ATPase, Na+/K+ transporting, alpha 2 polypeptide
ATR ATR serine/threonine kinase
BAZ1A bromodomain adjacent to zinc finger domain, 1A
BIRC6 baculoviral IAP repeat containing 6
BRDT bromodomain, testis-specific
BRICD5 BRICHOS domain containing 5
C1S complement component 1, s subcomponent
CABP2 calcium binding protein 2
CACNG5 calcium channel, voltage-dependent, gamma subunit 5
CARD9 caspase recruitment domain family, member 9
CASP12 caspase 12 (gene/pseudogene)
CCDC112 coiled-coil domain containing 112
CCDC116 coiled-coil domain containing 116
CCDC129 coiled-coil domain containing 129
CCDC138 coiled-coil domain containing 138
CCDC27 coiled-coil domain containing 27
CCDC83 coiled-coil domain containing 83
CCHCR1 coiled-coil alpha-helical rod protein 1
CD109 CD109 molecule
CD5 CD5 molecule
CDH11 cadherin 11, type 2, OB-cadherin (osteoblast)
CEP290 centrosomal protein 290kDa
CFAP43 cilia and flagella associated protein 43
CHD6 chromodomain helicase DNA binding protein 6
CHMP6 charged multivesicular body protein 6
CHRNA5 cholinergic receptor, nicotinic, alpha 5 (neuronal)
CHRNB2 cholinergic receptor, nicotinic, beta 2 (neuronal)
CHST9 carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9
CHTF18 CTF18, chromosome transmission fidelity factor 18 homolog (S. cerevisiae)
CIAPIN1 cytokine induced apoptosis inhibitor 1
CLCN6 chloride channel, voltage-sensitive 6
COG5 component of oligomeric golgi complex 5
COL6A3 collagen, type VI, alpha 3
CORO1A coronin, actin binding protein, 1A
CRABP1 cellular retinoic acid binding protein 1
CTNNA2 catenin (cadherin-associated protein), alpha 2
CYP11B1 cytochrome P450, family 11, subfamily B, polypeptide 1
CYP1A1 cytochrome P450, family 1, subfamily A, polypeptide 1
DCC DCC netrin 1 receptor
DDO D-aspartate oxidase
DECR1 2,4-dienoyl CoA reductase 1, mitochondrial
DECR2 2,4-dienoyl CoA reductase 2, peroxisomal
DGKQ diacylglycerol kinase, theta 110kDa
DNA2 DNA replication helicase/nuclease 2
DNAH10 dynein, axonemal, heavy chain 10
DNAH12 dynein, axonemal, heavy chain 12
DNAH14 dynein, axonemal, heavy chain 14
DNAH3 dynein, axonemal, heavy chain 3
DNAJC17 DnaJ (Hsp40) homolog, subfamily C, member 17
DNAL1 dynein, axonemal, light chain 1
DOCK7 dedicator of cytokinesis 7
DSP desmoplakin
DYM dymeclin
E2F4 E2F transcription factor 4, p107/p130-binding
E2F8 E2F transcription factor 8
EAF1 ELL associated factor 1
ECHDC3 enoyl CoA hydratase domain containing 3
EEPD1 endonuclease/exonuclease/phosphatase family domain containing 1
EP300 E1A binding protein p300
EPB42 erythrocyte membrane protein band 4.2
ERC2 ELKS/RAB6-interacting/CAST family member 2
ERF Ets2 repressor factor
EVI5 ecotropic viral integration site 5
EVPL envoplakin
EXOSC10 exosome component 10
FAAH2 fatty acid amide hydrolase 2
FAM13C family with sequence similarity 13, member C
FAM169A family with sequence similarity 169, member A
FAM171B family with sequence similarity 171, member B
FAM181A family with sequence similarity 181, member A
FAM65B family with sequence similarity 65, member B
FAM84B family with sequence similarity 84, member B
FAT4 FAT atypical cadherin 4
FGD5 FYVE, RhoGEF and PH domain containing 5
FLCN folliculin
FLG filaggrin
FLG2 filaggrin family member 2
FNDC1 fibronectin type III domain containing 1
FNDC3B fibronectin type III domain containing 3B
FRMD4A FERM domain containing 4A
FUBP3 far upstream element (FUSE) binding protein 3
GBAP1 glucosidase, beta, acid pseudogene 1
GCKR glucokinase (hexokinase 4) regulator
GHR growth hormone receptor
GLB1L galactosidase, beta 1-like
GLRA3 glycine receptor, alpha 3
GOLIM4 golgi integral membrane protein 4
GPD2 glycerol-3-phosphate dehydrogenase 2 (mitochondrial)
GPR149 G protein-coupled receptor 149
HEMGN hemogen
HFM1 HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)
HIPK4 homeodomain interacting protein kinase 4
HLA-DQB2 major histocompatibility complex, class II, DQ beta 2
HLA-DRB1 major histocompatibility complex, class II, DR beta 1
HOGA1 4-hydroxy-2-oxoglutarate aldolase 1
HRAS Harvey rat sarcoma viral oncogene homolog
HSPG2 heparan sulfate proteoglycan 2
ICE1 interactor of little elongation complex ELL subunit 1
IFITM10 interferon induced transmembrane protein 10
IGSF10 immunoglobulin superfamily, member 10
IMPG2 interphotoreceptor matrix proteoglycan 2
INTS10 integrator complex subunit 10
ITGA7 integrin, alpha 7
IZUMO2 IZUMO family member 2
JMJD1C jumonji domain containing 1C
JMJD7-PLA2G4B JMJD7-PLA2G4B readthrough
JMJD8 jumonji domain containing 8
KATNB1 katanin p80 (WD repeat containing) subunit B 1
KAZN kazrin, periplakin interacting protein
KCNH7 potassium channel, voltage gated eag related subfamily H, member 7
KCNJ1 potassium channel, inwardly rectifying subfamily J, member 1
KCNK1 potassium channel, two pore domain subfamily K, member 1
KCNMB3 potassium channel subfamily M regulatory beta subunit 3
KCNT2 potassium channel, sodium activated subfamily T, member 2
KDM3A lysine (K)-specific demethylase 3A
KEAP1 kelch-like ECH-associated protein 1
KIAA0368 KIAA0368
KIAA1671 KIAA1671
KRTAP10-11 keratin associated protein 10-11
KRTAP5-4 keratin associated protein 5-4
KSR2 kinase suppressor of ras 2
LAMC1 laminin, gamma 1 (formerly LAMB2)
LGALS8 lectin, galactoside-binding, soluble, 8
LMO7 LIM domain 7
LMOD3 leiomodin 3 (fetal)
LMTK1 lemur tail kinase 1
LOH12CR1 loss of heterozygosity, 12, chromosomal region 1
LRGUK leucine-rich repeats and guanylate kinase domain containing
LRP1B low density lipoprotein receptor-related protein 1B
LRRC8E leucine rich repeat containing 8 family, member E
LTV1 LTV1 ribosome biogenesis factor
MAP7D1 MAP7 domain containing 1
MAPK13 mitogen-activated protein kinase 13
MASP1 mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)
MC2R melanocortin 2 receptor (adrenocorticotropic hormone)
MCM7 minichromosome maintenance complex component 7
MED1 mediator complex subunit 1
MFSD10 major facilitator superfamily domain containing 10
MLXIP MLX interacting protein
MOV10L1 Mov10 RISC complex RNA helicase like 1
MPHOSPH10 M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)
MRC2 mannose receptor, C type 2
MRPL49 mitochondrial ribosomal protein L49
MRPS2 mitochondrial ribosomal protein S2
MS4A5 membrane-spanning 4-domains, subfamily A, member 5
MTCL1 microtubule crosslinking factor 1
MUC4 mucin 4, cell surface associated
MUC6 mucin 6, oligomeric mucus/gel-forming
MXRA5 matrix-remodelling associated 5
MYBPC2 myosin binding protein C, fast type
MYH6 myosin, heavy chain 6, cardiac muscle, alpha
MYLK2 myosin light chain kinase 2
MYO15A myosin XVA
MYOM1 myomesin 1
N4BP3 NEDD4 binding protein 3
NBPF14 neuroblastoma breakpoint family, member 14
NBPF20 neuroblastoma breakpoint family, member 20
NBPF9 neuroblastoma breakpoint family, member 9
NCEH1 neutral cholesterol ester hydrolase 1
NEB nebulin
NELL1 NEL-like 1 (chicken)
NF1 neurofibromin 1
NFATC4 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4
NFE2L1 nuclear factor, erythroid 2-like 1
NFKB2 nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)
NFYC nuclear transcription factor Y, gamma
NIF3L1 NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)
NIN ninein (GSK3B interacting protein)
NIPBL Nipped-B homolog (Drosophila)
NOTUM notum pectinacetylesterase homolog (Drosophila)
NSD1 nuclear receptor binding SET domain protein 1
NSMCE2 non-SMC element 2, MMS21 homolog (S. cerevisiae)
NT5C1A 5'-nucleotidase, cytosolic IA
NT5DC2 5'-nucleotidase domain containing 2
NUP160 nucleoporin 160kDa
NUSAP1 nucleolar and spindle associated protein 1
OAS1 2'-5'-oligoadenylate synthetase 1, 40/46kDa
OIT3 oncoprotein induced transcript 3
OR13C3 olfactory receptor, family 13, subfamily C, member 3
OR2D2 olfactory receptor, family 2, subfamily D, member 2
OR2M2 olfactory receptor, family 2, subfamily M, member 2
OR51T1 olfactory receptor, family 51, subfamily T, member 1
OR52I1 olfactory receptor, family 52, subfamily I, member 1
OR56B4 olfactory receptor, family 56, subfamily B, member 4
OR8J1 olfactory receptor, family 8, subfamily J, member 1
OSGIN1 oxidative stress induced growth inhibitor 1
OTUB2 OTU deubiquitinase, ubiquitin aldehyde binding 2
P3H3 prolyl 3-hydroxylase 3
PAPSS2 3'-phosphoadenosine 5'-phosphosulfate synthase 2
PARL presenilin associated, rhomboid-like
PAXIP1 PAX interacting (with transcription-activation domain) protein 1
PCDH10 protocadherin 10
PCDH18 protocadherin 18
PCDHB11 protocadherin beta 11
PCDHB3 protocadherin beta 3
PCNX pecanex homolog (Drosophila)
PDE4DIP phosphodiesterase 4D interacting protein
PDIA3 protein disulfide isomerase family A, member 3
PDZD2 PDZ domain containing 2
PER1 period circadian clock 1
PES1 pescadillo ribosomal biogenesis factor 1
PHB prohibitin
PHF3 PHD finger protein 3
PHLPP1 PH domain and leucine rich repeat protein phosphatase 1
PIBF1 progesterone immunomodulatory binding factor 1
PIK3C2B phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta
PKHD1L1 polycystic kidney and hepatic disease 1 (autosomal recessive)-like 1
PLCB2 phospholipase C, beta 2
PLEKHG2 pleckstrin homology domain containing, family G (with RhoGef domain) member 2
PLIN5 perilipin 5
PLK4 polo-like kinase 4
PLSCR3 phospholipid scramblase 3
PMS2 PMS2 postmeiotic segregation increased 2 (S. cerevisiae)
PRAMEF10 PRAME family member 10
PRDM10 PR domain containing 10
PREX2 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2
PRUNE2 prune homolog 2 (Drosophila)
PTPRB protein tyrosine phosphatase, receptor type, B
PUM2 pumilio RNA-binding family member 2
RAG1 recombination activating gene 1
RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2
RBM7 RNA binding motif protein 7
RFX3 regulatory factor X, 3 (influences HLA class II expression)
RFX7 regulatory factor X, 7
RIMBP3 RIMS binding protein 3
RIMS1 regulating synaptic membrane exocytosis 1
RIN2 Ras and Rab interactor 2
RNF31 ring finger protein 31
ROR2 receptor tyrosine kinase-like orphan receptor 2
RSPO3 R-spondin 3
RSRC1 arginine/serine-rich coiled-coil 1
RTTN rotatin
SALL1 spalt-like transcription factor 1
SART3 squamous cell carcinoma antigen recognized by T cells 3
SASH1 SAM and SH3 domain containing 1
SBNO2 strawberry notch homolog 2 (Drosophila)
SCGB1C1 secretoglobin, family 1C, member 1
SEC23IP SEC23 interacting protein
SEMA6A sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
SERINC2 serine incorporator 2
SERPINA11 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 11
SERPINB11 serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)
SERPINB13 serpin peptidase inhibitor, clade B (ovalbumin), member 13
SFXN2 sideroflexin 2
SGK494 uncharacterized serine/threonine-protein kinase SgK494
SH2B3 SH2B adaptor protein 3
SH3D19 SH3 domain containing 19
SHF Src homology 2 domain containing F
SHROOM3 shroom family member 3
SLC28A1 solute carrier family 28 (concentrative nucleoside transporter), member 1
SLC34A2 solute carrier family 34 (type II sodium/phosphate cotransporter), member 2
SLC35C2 solute carrier family 35 (GDP-fucose transporter), member C2
SLCO2A1 solute carrier organic anion transporter family, member 2A1
SMAD3 SMAD family member 3
SNTA1 syntrophin, alpha 1
SP140L SP140 nuclear body protein-like
SPAG6 sperm associated antigen 6
SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1
SPRED1 sprouty-related, EVH1 domain containing 1
SPTBN1 spectrin, beta, non-erythrocytic 1
SPTBN5 spectrin, beta, non-erythrocytic 5
SSX1 synovial sarcoma, X breakpoint 1
STIL SCL/TAL1 interrupting locus
STK32C serine/threonine kinase 32C
STOML2 stomatin (EPB72)-like 2
STRA13 stimulated by retinoic acid 13
SULT1A1 sulfotransferase family, cytosolic, 1A, phenol-preferring, member 1
SYNE2 spectrin repeat containing, nuclear envelope 2
SYNJ2 synaptojanin 2
TBATA thymus, brain and testes associated
TBC1D9 TBC1 domain family, member 9 (with GRAM domain)
TEX10 testis expressed 10
TG thyroglobulin
TGIF2 TGFB-induced factor homeobox 2
TGM6 transglutaminase 6
TMC2 transmembrane channel-like 2
TP53 tumor protein p53
TP53BP1 tumor protein p53 binding protein 1
TRAFD1 TRAF-type zinc finger domain containing 1
TRAK1 trafficking protein, kinesin binding 1
TRPA1 transient receptor potential cation channel, subfamily A, member 1
TRPC5 transient receptor potential cation channel, subfamily C, member 5
TSPAN13 tetraspanin 13
TTC26 tetratricopeptide repeat domain 26
TTLL13P tubulin tyrosine ligase-like family member 13, pseudogene
TTLL6 tubulin tyrosine ligase-like family member 6
TUBGCP5 tubulin, gamma complex associated protein 5
TVP23A trans-golgi network vesicle protein 23 homolog A (S. cerevisiae)
TYW5 tRNA-yW synthesizing protein 5
UBE2T ubiquitin-conjugating enzyme E2T
UMODL1 uromodulin-like 1
UNC5B unc-5 homolog B (C. elegans)
URB1 URB1 ribosome biogenesis 1 homolog (S. cerevisiae)
USH2A Usher syndrome 2A (autosomal recessive, mild)
USP48 ubiquitin specific peptidase 48
VWA3A von Willebrand factor A domain containing 3A
WDFY3 WD repeat and FYVE domain containing 3
WDR7 WD repeat domain 7
WDR81 WD repeat domain 81
WNK2 WNK lysine deficient protein kinase 2
WRAP73 WD repeat containing, antisense to TP73
WWOX WW domain containing oxidoreductase
XAF1 XIAP associated factor 1
ZBTB32 zinc finger and BTB domain containing 32
ZKSCAN4 zinc finger with KRAB and SCAN domains 4
ZNF462 zinc finger protein 462
ZNF479 zinc finger protein 479
ZNF543 zinc finger protein 543
ZNF551 zinc finger protein 551
ZNF566 zinc finger protein 566
ZNF618 zinc finger protein 618
ZNF638 zinc finger protein 638
ZNF646 zinc finger protein 646
ZNF708 zinc finger protein 708
ZNF831 zinc finger protein 831