SH-4 Gene Set

Dataset Sanger Dependency Map Cancer Cell Line Proteomics
Category proteomics
Type cell line
Description cell line derived from Melanoma Tumour (Cell Model Passports, SIDM01079)
External Link https://cellmodelpassports.sanger.ac.uk/passports/SIDM01079
Similar Terms
Downloads & Tools

Genes

194 proteins associated with the cell line SH-4 from the Sanger Dependency Map Cancer Cell Line Proteomics dataset.

Symbol Name
AAK1 AP2 associated kinase 1
AARS2 alanyl-tRNA synthetase 2, mitochondrial
AGA aspartylglucosaminidase
ANKS1A ankyrin repeat and sterile alpha motif domain containing 1A
ARMC9 armadillo repeat containing 9
ASAH1 N-acylsphingosine amidohydrolase (acid ceramidase) 1
ATOX1 antioxidant 1 copper chaperone
ATP6V1F ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F
ATP6V1G1 ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1
BOLA1 bolA family member 1
CCDC167 coiled-coil domain containing 167
CCDC43 coiled-coil domain containing 43
CD320 CD320 molecule
CGGBP1 CGG triplet repeat binding protein 1
COL9A3 collagen, type IX, alpha 3
COMMD6 COMM domain containing 6
COMMD8 COMM domain containing 8
COMMD9 COMM domain containing 9
COX5B cytochrome c oxidase subunit Vb
CTHRC1 collagen triple helix repeat containing 1
CUL4B cullin 4B
CUTA cutA divalent cation tolerance homolog (E. coli)
CYCS cytochrome c, somatic
DPY30 dpy-30 homolog (C. elegans)
EIF1 eukaryotic translation initiation factor 1
EIF4EBP1 eukaryotic translation initiation factor 4E binding protein 1
EPS15L1 epidermal growth factor receptor pathway substrate 15-like 1
FAM193B family with sequence similarity 193, member B
FIS1 fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae)
FKBP1A FK506 binding protein 1A, 12kDa
GM2A GM2 ganglioside activator
GNPTAB N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits
HBD hemoglobin, delta
HS1BP3 HCLS1 binding protein 3
HSPE1 heat shock 10kDa protein 1
HYPK huntingtin interacting protein K
INIP INTS3 and NABP interacting protein
ISCA2 iron-sulfur cluster assembly 2
ISCU iron-sulfur cluster assembly enzyme
KIF20B kinesin family member 20B
LAMP2 lysosomal-associated membrane protein 2
LAMTOR5 late endosomal/lysosomal adaptor, MAPK and MTOR activator 5
LINC01254 long intergenic non-protein coding RNA 1254
LOC105374084 uncharacterized LOC105374084
LSM3 LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)
LSM8 LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae)
MANF mesencephalic astrocyte-derived neurotrophic factor
MED10 mediator complex subunit 10
METTL9 methyltransferase like 9
MRPL12 mitochondrial ribosomal protein L12
MRPS28 mitochondrial ribosomal protein S28
MYCBP MYC binding protein
NDE1 nudE neurodevelopment protein 1
NDUFA2 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 2, 8kDa
NDUFA5 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5
NDUFA8 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8, 19kDa
NDUFAB1 NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1, 8kDa
NEU1 sialidase 1 (lysosomal sialidase)
NFU1 NFU1 iron-sulfur cluster scaffold
NUP50 nucleoporin 50kDa
NUP62 nucleoporin 62kDa
OR52N2 olfactory receptor, family 52, subfamily N, member 2
OTUD6B OTU domain containing 6B
PACSIN2 protein kinase C and casein kinase substrate in neurons 2
PBDC1 polysaccharide biosynthesis domain containing 1
PEA15 phosphoprotein enriched in astrocytes 15
PEX19 peroxisomal biogenesis factor 19
PIR pirin (iron-binding nuclear protein)
POLR1D polymerase (RNA) I polypeptide D, 16kDa
PRDX3 peroxiredoxin 3
QDPR quinoid dihydropteridine reductase
RPLP1 ribosomal protein, large, P1
RPLP2 ribosomal protein, large, P2
RSRC2 arginine/serine-rich coiled-coil 2
S100A1 S100 calcium binding protein A1
S100A13 S100 calcium binding protein A13
SDCBP syndecan binding protein (syntenin)
SF3B4 splicing factor 3b, subunit 4, 49kDa
SKP1 S-phase kinase-associated protein 1
SLC39A10 solute carrier family 39 (zinc transporter), member 10
SMS spermine synthase
SNAP29 synaptosomal-associated protein, 29kDa
SORT1 sortilin 1
SPRY4 sprouty homolog 4 (Drosophila)
STAM signal transducing adaptor molecule (SH3 domain and ITAM motif) 1
SUPT20HL1 suppressor of Ty 20 homolog (S. cerevisiae)-like 1
SYAP1 synapse associated protein 1
TACC1 transforming, acidic coiled-coil containing protein 1
TAF10 TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 30kDa
TBCA tubulin folding cofactor A
TIMM8A translocase of inner mitochondrial membrane 8 homolog A (yeast)
TOMM6 translocase of outer mitochondrial membrane 6 homolog (yeast)
TOX4 TOX high mobility group box family member 4
TPM3 tropomyosin 3
UBQLN1 ubiquilin 1
VAT1 vesicle amine transport 1
ZFAND6 zinc finger, AN1-type domain 6
ZNF706 zinc finger protein 706

Symbol Name
ABCB6 ATP-binding cassette, sub-family B (MDR/TAP), member 6 (Langereis blood group)
ADRM1 adhesion regulating molecule 1
ANO6 anoctamin 6
APOL4 apolipoprotein L, 4
BCLAF1 BCL2-associated transcription factor 1
C19ORF53 chromosome 19 open reading frame 53
CAV1 caveolin 1, caveolae protein, 22kDa
CBX5 chromobox homolog 5
CD109 CD109 molecule
CDC40 cell division cycle 40
CHTOP chromatin target of PRMT1
CTCF CCCTC-binding factor (zinc finger protein)
DAPK3 death-associated protein kinase 3
DDX52 DEAD (Asp-Glu-Ala-Asp) box polypeptide 52
DNAJC21 DnaJ (Hsp40) homolog, subfamily C, member 21
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3
ERGIC3 ERGIC and golgi 3
ERO1B endoplasmic reticulum oxidoreductase 1 beta
EXOC1 exocyst complex component 1
EXOSC3 exosome component 3
FECH ferrochelatase
FHL2 four and a half LIM domains 2
FLNB filamin B, beta
FSCN1 fascin actin-bundling protein 1
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1
HNRNPH3 heterogeneous nuclear ribonucleoprotein H3 (2H9)
HNRNPL heterogeneous nuclear ribonucleoprotein L
HNRNPR heterogeneous nuclear ribonucleoprotein R
HOMER3 homer scaffolding protein 3
HSPA6 heat shock 70kDa protein 6 (HSP70B')
IMP4 IMP4, U3 small nucleolar ribonucleoprotein
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1
LDB3 LIM domain binding 3
LINC00176 long intergenic non-protein coding RNA 176
MAN2C1 mannosidase, alpha, class 2C, member 1
MAP1B microtubule-associated protein 1B
MAP2K7 mitogen-activated protein kinase kinase 7
MECR mitochondrial trans-2-enoyl-CoA reductase
MFAP1 microfibrillar-associated protein 1
MORF4L1 mortality factor 4 like 1
NBAS neuroblastoma amplified sequence
NDUFB11 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 11, 17.3kDa
NOL8 nucleolar protein 8
NOP56 NOP56 ribonucleoprotein
NRGN neurogranin (protein kinase C substrate, RC3)
NUB1 negative regulator of ubiquitin-like proteins 1
NUP133 nucleoporin 133kDa
NUP43 nucleoporin 43kDa
NXF1 nuclear RNA export factor 1
PAF1 Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)
PCYT1B phosphate cytidylyltransferase 1, choline, beta
PHPT1 phosphohistidine phosphatase 1
PLRG1 pleiotropic regulator 1
POLR2B polymerase (RNA) II (DNA directed) polypeptide B, 140kDa
PRCC papillary renal cell carcinoma (translocation-associated)
PRPF19 pre-mRNA processing factor 19
PSMD5 proteasome (prosome, macropain) 26S subunit, non-ATPase, 5
RAE1 ribonucleic acid export 1
RBM39 RNA binding motif protein 39
RBM7 RNA binding motif protein 7
RBMX RNA binding motif protein, X-linked
RFC5 replication factor C (activator 1) 5, 36.5kDa
RPL10 ribosomal protein L10
RPL28 ribosomal protein L28
RPL3 ribosomal protein L3
RPL34 ribosomal protein L34
RTTN rotatin
SAP18 Sin3A-associated protein, 18kDa
SEH1L SEH1-like (S. cerevisiae)
SF3B3 splicing factor 3b, subunit 3, 130kDa
SFN stratifin
SLTM SAFB-like, transcription modulator
SNRNP70 small nuclear ribonucleoprotein 70kDa (U1)
SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 16kDa
SRSF1 serine/arginine-rich splicing factor 1
SRSF2 serine/arginine-rich splicing factor 2
SRSF7 serine/arginine-rich splicing factor 7
SS18 synovial sarcoma translocation, chromosome 18
STK38 serine/threonine kinase 38
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein
TAOK1 TAO kinase 1
TBC1D23 TBC1 domain family, member 23
TBK1 TANK-binding kinase 1
THRAP3 thyroid hormone receptor associated protein 3
THUMPD1 THUMP domain containing 1
TNC tenascin C
TPPP tubulin polymerization promoting protein
TTC22 tetratricopeptide repeat domain 22
UBXN4 UBX domain protein 4
UTP3 UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)
WAPL WAPL cohesin release factor
WDR5 WD repeat domain 5
WDR75 WD repeat domain 75
YTHDC1 YTH domain containing 1
ZC3H18 zinc finger CCCH-type containing 18
ZNF292 zinc finger protein 292