SHD Gene Set

Dataset CM4AI KOLF21J CRISPRi Gene Perturbation Atlas
Category transcriptomics
Type gene perturbation
Description Src homology 2 domain containing transforming protein D| (NCBI Entrez Gene Database, 56961)
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Genes

348 genes differentially expressed following the SHD gene perturbation from the CM4AI KOLF21J CRISPRi Gene Perturbation Atlas.

increased expression

Symbol Name Standardized Value
PCDHA6 protocadherin alpha 6 2.27988
GBP7 guanylate binding protein 7 2.27988
AHNAK2 AHNAK nucleoprotein 2 2.27988
MRPL53 mitochondrial ribosomal protein L53 2.27988
BATF3 basic leucine zipper transcription factor, ATF-like 3 2.27988
ADRB2 adrenoceptor beta 2, surface 2.27988
RDH16 retinol dehydrogenase 16 (all-trans) 2.27988
DCST1 DC-STAMP domain containing 1 2.27988
SLC41A1 solute carrier family 41 (magnesium transporter), member 1 2.27988
SHBG sex hormone-binding globulin 2.27988
OR56A1 olfactory receptor, family 56, subfamily A, member 1 2.27988
GABRB2 gamma-aminobutyric acid (GABA) A receptor, beta 2 2.27988
DOC2B double C2-like domains, beta 2.27988
NKX3-1 NK3 homeobox 1 2.27988
FGF18 fibroblast growth factor 18 2.27988
FZD9 frizzled class receptor 9 2.27988
ABCA10 ATP-binding cassette, sub-family A (ABC1), member 10 2.27988
BMP8B bone morphogenetic protein 8b 2.27988
MEPE matrix extracellular phosphoglycoprotein 2.27988
LOC112694756 uncharaterized LOC112694756 2.27988
CD68 CD68 molecule 2.27988
CD27 CD27 molecule 2.27988
ETFBKMT electron transfer flavoprotein subunit beta lysine methyltransferase 2.27988
KLB klotho beta 2.27988
NIBAN3 niban apoptosis regulator 3 2.27988
SYCP1 synaptonemal complex protein 1 2.22173
B3GALT2 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2 2.22173
PLAUR plasminogen activator, urokinase receptor 2.22173
NCKAP1L NCK-associated protein 1-like 2.22173
JOSD2 Josephin domain containing 2 2.22173
ZNF16 zinc finger protein 16 2.22173
EGFLAM EGF-like, fibronectin type III and laminin G domains 2.22173
SLC22A14 solute carrier family 22, member 14 2.22173
HBA2 hemoglobin, alpha 2 2.22173
TAS2R31 taste receptor, type 2, member 31 2.22173
OR5H6 olfactory receptor, family 5, subfamily H, member 6 (gene/pseudogene) 2.22173
ATP13A4 ATPase type 13A4 2.22173
C2ORF80 chromosome 2 open reading frame 80 2.22173
HCST hematopoietic cell signal transducer 2.22173
RS1 retinoschisin 1 2.22173
CPED1 cadherin-like and PC-esterase domain containing 1 2.22173
PTGER2 prostaglandin E receptor 2 (subtype EP2), 53kDa 2.22173
IGFBPL1 insulin-like growth factor binding protein-like 1 2.22173
NOTO notochord homeobox 2.22173
TNFRSF13C tumor necrosis factor receptor superfamily, member 13C 2.22173
SLC6A3 solute carrier family 6 (neurotransmitter transporter), member 3 2.22173
SLC9C2 solute carrier family 9, member C2 (putative) 2.22173
HORMAD1 HORMA domain containing 1 2.22173
SLC4A9 solute carrier family 4, sodium bicarbonate cotransporter, member 9 2.22173
C19ORF38 chromosome 19 open reading frame 38 2.22173
CLEC19A C-type lectin domain family 19, member A 2.22173
SPOCD1 SPOC domain containing 1 2.22173
SLC25A41 solute carrier family 25, member 41 2.22173
FREM1 FRAS1 related extracellular matrix 1 2.22173
NME8 NME/NM23 family member 8 2.22173
NXPH3 neurexophilin 3 2.22173
SPINK6 serine peptidase inhibitor, Kazal type 6 2.22173
SPINK4 serine peptidase inhibitor, Kazal type 4 2.22173
RGL4 ral guanine nucleotide dissociation stimulator-like 4 2.22173
USP26 ubiquitin specific peptidase 26 2.22173
WDR87 WD repeat domain 87 2.22173
MS4A4E membrane-spanning 4-domains, subfamily A, member 4E 2.22173
SLC26A7 solute carrier family 26 (anion exchanger), member 7 2.22173
CELF2 CUGBP, Elav-like family member 2 2.22173
CREBL2 cAMP responsive element binding protein-like 2 2.22173
THRSP thyroid hormone responsive 2.22173
RFPL3 ret finger protein-like 3 2.22173
LILRB3 leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3 2.22173
LY6S lymphocyte antigen 6 family member S 2.22173
CARMIL1 capping protein regulator and myosin 1 linker 1 2.22173
SPATS1 spermatogenesis associated, serine-rich 1 2.22173
CES4A carboxylesterase 4A 2.22173
ALX1 ALX homeobox 1 2.22173
RHCE Rh blood group, CcEe antigens 2.22173
FOXN4 forkhead box N4 2.22173
C1QTNF9B C1q and tumor necrosis factor related protein 9B 2.22173
SPMIP7 sperm microtubule inner protein 7 2.22173
BDKRB2 bradykinin receptor B2 2.22173
WNT16 wingless-type MMTV integration site family, member 16 2.22173
DOK2 docking protein 2, 56kDa 2.22173
PHF24 PHD finger protein 24 2.22173
GPAT3 glycerol-3-phosphate acyltransferase 3 2.22173
LRRC8C-DT LRRC8C divergent transcript 2.22173
CPNE8-AS1 CPNE8 antisense RNA 1 2.22173
CIMAP1B ciliary microtubule associated protein 1B 2.22173
LOC124906010 uncharacterized LOC124906010 2.22173
CCNP cyclin P 2.22173
BNIP5 BCL2 interacting protein 5 2.22173
CBLIF cobalamin binding intrinsic factor 2.22173
DEPP1 DEPP autophagy regulator 1 2.22173
SMIM38 small integral membrane protein 38 2.22173
CRYZL2P-SEC16B CRYZL2P-SEC16B readthrough 2.22173
SLF2 SMC5-SMC6 complex localization factor 2 2.22173
FCMR Fc fragment of IgM receptor 2.22173
ZNF441 zinc finger protein 441 2.22173
OR52E5 olfactory receptor, family 52, subfamily E, member 5 2.22173
IAPP islet amyloid polypeptide 2.22173
TLR6 toll-like receptor 6 2.22173
NHLRC4 NHL repeat containing 4 2.22173
TMEM236 transmembrane protein 236 2.22173
CD79A CD79a molecule, immunoglobulin-associated alpha 2.22173
CALCA calcitonin-related polypeptide alpha 2.22173
FAM43B family with sequence similarity 43, member B 2.22173
POLR2J2 polymerase (RNA) II (DNA directed) polypeptide J2 2.22173
TLE2 transducin-like enhancer of split 2 2.22173
PRB2 proline-rich protein BstNI subfamily 2 2.22173
OASL 2'-5'-oligoadenylate synthetase-like 2.22173
C1QL2 complement component 1, q subcomponent-like 2 2.22173
INSRR insulin receptor-related receptor 2.22173
GPR37L1 G protein-coupled receptor 37 like 1 2.22173
ARMCX5-GPRASP2 ARMCX5-GPRASP2 readthrough 2.22173
KCND3 potassium channel, voltage gated Shal related subfamily D, member 3 2.22173
FAM228A family with sequence similarity 228, member A 2.22173
GATA3 GATA binding protein 3 2.22173
LRRC70 leucine rich repeat containing 70 2.22173
ALG10B ALG10B, alpha-1,2-glucosyltransferase 2.22173
BARX2 BARX homeobox 2 2.22173
CNTFR ciliary neurotrophic factor receptor 2.22173
KDM4A lysine (K)-specific demethylase 4A 2.22173
RASAL3 RAS protein activator like 3 2.22173
FOXD1 forkhead box D1 2.22173
TDRKH tudor and KH domain containing 2.22173
RNF222 ring finger protein 222 2.22173
CST7 cystatin F (leukocystatin) 2.22173
KRT222 keratin 222, type II 2.22173
NOX1 NADPH oxidase 1 2.22173
EVX2 even-skipped homeobox 2 2.22173
TIGD3 tigger transposable element derived 3 2.22173
KLF1 Kruppel-like factor 1 (erythroid) 2.22173
ADAM7 ADAM metallopeptidase domain 7 2.22173
LAIR1 leukocyte-associated immunoglobulin-like receptor 1 2.22173
ABTB1 ankyrin repeat and BTB (POZ) domain containing 1 2.22173
SLC6A13 solute carrier family 6 (neurotransmitter transporter), member 13 2.22173
DNAH12 dynein, axonemal, heavy chain 12 2.22173
OXGR1 oxoglutarate (alpha-ketoglutarate) receptor 1 2.22173
PCDHGB2 protocadherin gamma subfamily B, 2 2.22173
MGAT1 mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase 2.22173
SLITRK1 SLIT and NTRK-like family, member 1 2.22173
DDX4 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 2.22173
PSORS1C2 psoriasis susceptibility 1 candidate 2 2.22173
IER5L immediate early response 5-like 2.22173
SCGB1A1 secretoglobin, family 1A, member 1 (uteroglobin) 2.22173
ZMYND12 zinc finger, MYND-type containing 12 2.22173
OR3A1 olfactory receptor, family 3, subfamily A, member 1 2.22173
CAV2 caveolin 2 2.22173
GP1BA glycoprotein Ib (platelet), alpha polypeptide 2.22173
TREH trehalase (brush-border membrane glycoprotein) 2.22173
CDH13 cadherin 13 2.22173
CLEC4G C-type lectin domain family 4, member G 2.22173
CDH17 cadherin 17, LI cadherin (liver-intestine) 2.22173
DND1 DND microRNA-mediated repression inhibitor 1 2.22173
SLC38A8 solute carrier family 38, member 8 2.22173
CDH26 cadherin 26 2.22173
SLC25A34 solute carrier family 25, member 34 2.22173
TSPAN16 tetraspanin 16 2.22173
RIN1 Ras and Rab interactor 1 2.22173
PCDHAC1 protocadherin alpha subfamily C, 1 2.22173
XRCC2 X-ray repair complementing defective repair in Chinese hamster cells 2 2.22173
LAMB4 laminin, beta 4 2.22173
SPHKAP SPHK1 interactor, AKAP domain containing 2.22173
ITGB7 integrin, beta 7 2.22173
AICDA activation-induced cytidine deaminase 2.22173
CBX8 chromobox homolog 8 2.22173
HSD17B1 hydroxysteroid (17-beta) dehydrogenase 1 2.22173
FAM209A family with sequence similarity 209, member A 2.22173
C2CD4A C2 calcium-dependent domain containing 4A 2.22173
P2RY13 purinergic receptor P2Y, G-protein coupled, 13 2.22173
IL1A interleukin 1, alpha 2.22173
ZFP92 ZFP92 zinc finger protein 2.22173
FSHR follicle stimulating hormone receptor 2.22173
CALR3 calreticulin 3 2.22173
ITGA11 integrin, alpha 11 2.22173
SEZ6L seizure related 6 homolog (mouse)-like 2.22173
KCNJ15 potassium channel, inwardly rectifying subfamily J, member 15 2.22173
RNASE1 ribonuclease, RNase A family, 1 (pancreatic) 2.22173
SSPN sarcospan 2.22173
PLS1 plastin 1 2.22173
CHRNB2 cholinergic receptor, nicotinic, beta 2 (neuronal) 2.22173
NLRP3 NLR family, pyrin domain containing 3 2.22173
CHRNA10 cholinergic receptor, nicotinic, alpha 10 (neuronal) 2.22173
GALNT9 polypeptide N-acetylgalactosaminyltransferase 9 2.22173
GMPR2 guanosine monophosphate reductase 2 2.22173
ATOH7 atonal homolog 7 (Drosophila) 2.22173
CCDC138 coiled-coil domain containing 138 2.22173
PSD4 pleckstrin and Sec7 domain containing 4 2.22173
TPRX1 tetra-peptide repeat homeobox 1 2.22173
BTBD18 BTB (POZ) domain containing 18 2.22173
BTBD19 BTB (POZ) domain containing 19 2.22173
RHOJ ras homolog family member J 2.22173
SLC22A6 solute carrier family 22 (organic anion transporter), member 6 2.22173
SPON2 spondin 2, extracellular matrix protein 2.22173
NLRP14 NLR family, pyrin domain containing 14 2.22173
GALP galanin-like peptide 2.22173
POPDC2 popeye domain containing 2 2.22173
COPZ2 coatomer protein complex, subunit zeta 2 2.22173
TMEM86B transmembrane protein 86B 2.22173
SMIM1 small integral membrane protein 1 (Vel blood group) 2.22173
LCP1 lymphocyte cytosolic protein 1 (L-plastin) 2.22173
CHAD chondroadherin 2.22173
ALDH1A1 aldehyde dehydrogenase 1 family, member A1 2.22173
ACVRL1 activin A receptor type II-like 1 2.22173
MS4A12 membrane-spanning 4-domains, subfamily A, member 12 2.22173
CLCNKB chloride channel, voltage-sensitive Kb 2.22173
ALLC allantoicase 2.22173
OR10G3 olfactory receptor, family 10, subfamily G, member 3 2.22173
GNG13 guanine nucleotide binding protein (G protein), gamma 13 2.22173
RNF5 ring finger protein 5, E3 ubiquitin protein ligase 2.22173
NAA11 N(alpha)-acetyltransferase 11, NatA catalytic subunit 2.22173
PADI3 peptidyl arginine deiminase, type III 2.22173
ANGPTL4 angiopoietin-like 4 2.22173
ANKRD7 ankyrin repeat domain 7 2.22173
B3GNT3 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3 2.22173
ITPKA inositol-trisphosphate 3-kinase A 2.22173
CPVL carboxypeptidase, vitellogenic-like 2.21704
CUL4B cullin 4B 2.21001
SORBS1 sorbin and SH3 domain containing 1 2.20229
NKIRAS1 NFKB inhibitor interacting Ras-like 1 2.20229
ZNF3 zinc finger protein 3 2.20229
PPCDC phosphopantothenoylcysteine decarboxylase 2.19869
RNF103 ring finger protein 103 2.15481
MAT2B methionine adenosyltransferase II, beta 2.14471
CCNG1 cyclin G1 2.14368
KCNIP2 Kv channel interacting protein 2 2.14368
COCH cochlin 2.12476
CDC14B cell division cycle 14B 2.12426
ZDHHC13 zinc finger, DHHC-type containing 13 2.10592
ERCC8 excision repair cross-complementation group 8 2.08168
LGR4 leucine-rich repeat containing G protein-coupled receptor 4 2.0805
MEGF9 multiple EGF-like-domains 9 2.07887
NFKBIE nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon 2.06549
GRIK3 glutamate receptor, ionotropic, kainate 3 2.06116
EIF2A eukaryotic translation initiation factor 2A, 65kDa 2.06116
TTC7B tetratricopeptide repeat domain 7B 2.03447
PLEKHJ1 pleckstrin homology domain containing, family J member 1 2.03447
HACL1 2-hydroxyacyl-CoA lyase 1 2.0229
WIZ widely interspaced zinc finger motifs 2.0229
DNAJC15 DnaJ (Hsp40) homolog, subfamily C, member 15 2.0229
PPTC7 PTC7 protein phosphatase homolog (S. cerevisiae) 2.02076
MMP9 matrix metallopeptidase 9 2.02023
SULF1 sulfatase 1 2.01755
PHACTR1 phosphatase and actin regulator 1 2.01467
MFAP2 microfibrillar-associated protein 2 2.01023

decreased expression

Symbol Name Standardized Value
CBX7 chromobox homolog 7 -2.27988
ETV3 ets variant 3 -2.27988
SEMA3D sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D -2.27988
CAMSAP3 calmodulin regulated spectrin-associated protein family, member 3 -2.27988
SYNE1 spectrin repeat containing, nuclear envelope 1 -2.27988
SOD3 superoxide dismutase 3, extracellular -2.27988
RAD51 RAD51 recombinase -2.22173
TBX19 T-box 19 -2.22173
ZNF780A zinc finger protein 780A -2.22173
LIAT1 ligand of ATE1 -2.22173
NRK Nik related kinase -2.22173
ATP6V0A4 ATPase, H+ transporting, lysosomal V0 subunit a4 -2.22173
MATN1 matrilin 1, cartilage matrix protein -2.22173
RAI1 retinoic acid induced 1 -2.22173
MICB MHC class I polypeptide-related sequence B -2.22173
XPA xeroderma pigmentosum, complementation group A -2.22173
DBNL drebrin-like -2.22173
DNAH5 dynein, axonemal, heavy chain 5 -2.22173
TPMT thiopurine S-methyltransferase -2.22173
MANBA mannosidase, beta A, lysosomal -2.22173
AP4M1 adaptor-related protein complex 4, mu 1 subunit -2.22173
ESRRB estrogen-related receptor beta -2.22173
CTBS chitobiase, di-N-acetyl- -2.22173
SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 -2.22173
TMEM256 transmembrane protein 256 -2.22173
SLC7A14 solute carrier family 7, member 14 -2.22173
SOCS2 suppressor of cytokine signaling 2 -2.22173
CAMKK1 calcium/calmodulin-dependent protein kinase kinase 1, alpha -2.22173
ZSCAN22 zinc finger and SCAN domain containing 22 -2.22173
NARS2 asparaginyl-tRNA synthetase 2, mitochondrial (putative) -2.22173
POU5F1B POU class 5 homeobox 1B -2.22173
FAM91A1 family with sequence similarity 91, member A1 -2.22173
TAS2R20 taste receptor, type 2, member 20 -2.22173
LIN7B lin-7 homolog B (C. elegans) -2.22173
SCML1 sex comb on midleg-like 1 (Drosophila) -2.21531
HSD17B7 hydroxysteroid (17-beta) dehydrogenase 7 -2.21001
SOD1 superoxide dismutase 1, soluble -2.20755
RTL8A retrotransposon Gag like 8A -2.20754
NUDT18 nudix (nucleoside diphosphate linked moiety X)-type motif 18 -2.20229
TEKTIP1 tektin bundle interacting protein 1 -2.20229
NLRP10 NLR family, pyrin domain containing 10 -2.20229
SYT15B synaptotagmin 15B -2.20229
CSP2 CS pseudogene 2 -2.20229
JHY junctional cadherin complex regulator -2.20229
CUBN cubilin (intrinsic factor-cobalamin receptor) -2.20229
SPINK2 serine peptidase inhibitor, Kazal type 2 (acrosin-trypsin inhibitor) -2.20229
SHC2 SHC (Src homology 2 domain containing) transforming protein 2 -2.20229
FAM131C family with sequence similarity 131, member C -2.20229
FBXO4 F-box protein 4 -2.20229
FBLN5 fibulin 5 -2.20229
SLC5A11 solute carrier family 5 (sodium/inositol cotransporter), member 11 -2.20229
BRINP3 bone morphogenetic protein/retinoic acid inducible neural-specific 3 -2.20229
LINGO3 leucine rich repeat and Ig domain containing 3 -2.20229
TP53INP2 tumor protein p53 inducible nuclear protein 2 -2.20229
ATAD3C ATPase family, AAA domain containing 3C -2.20229
XKRX XK, Kell blood group complex subunit-related, X-linked -2.20229
ADGRD1 adhesion G protein-coupled receptor D1 -2.20229
ACAN aggrecan -2.20229
TRPM5 transient receptor potential cation channel, subfamily M, member 5 -2.20229
SEMA7A semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group) -2.20229
HPD 4-hydroxyphenylpyruvate dioxygenase -2.20229
NPIPB15 nuclear pore complex interacting protein family, member B15 -2.20229
ANKFN1 ankyrin-repeat and fibronectin type III domain containing 1 -2.20229
GSTT2B glutathione S-transferase theta 2B (gene/pseudogene) -2.20229
C11ORF42 chromosome 11 open reading frame 42 -2.20229
LGALS14 lectin, galactoside-binding, soluble, 14 -2.20229
NABP1 nucleic acid binding protein 1 -2.20229
SLC22A2 solute carrier family 22 (organic cation transporter), member 2 -2.20229
WNK4 WNK lysine deficient protein kinase 4 -2.20229
NXN nucleoredoxin -2.20229
GPR179 G protein-coupled receptor 179 -2.20229
DNAH1 dynein, axonemal, heavy chain 1 -2.20229
EFCAB12 EF-hand calcium binding domain 12 -2.20229
DKKL1 dickkopf-like 1 -2.20229
AP1S3 adaptor-related protein complex 1, sigma 3 subunit -2.19869
BBIP1 BBSome interacting protein 1 -2.18111
PDSS1 prenyl (decaprenyl) diphosphate synthase, subunit 1 -2.18111
ADD2 adducin 2 (beta) -2.17872
BRSK2 BR serine/threonine kinase 2 -2.17872
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) -2.16023
PRKG2 protein kinase, cGMP-dependent, type II -2.15772
FAM13A family with sequence similarity 13, member A -2.15772
CASR calcium-sensing receptor -2.15481
TUBB2A tubulin, beta 2A class IIa -2.14799
GNAI1 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1 -2.14375
AK5 adenylate kinase 5 -2.13995
EIF2S1 eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa -2.13995
DNAJC19 DnaJ (Hsp40) homolog, subfamily C, member 19 -2.11653
EFHC2 EF-hand domain (C-terminal) containing 2 -2.09395
KIZ kizuna centrosomal protein -2.08757
CDC34 cell division cycle 34 -2.0868
PDIA3 protein disulfide isomerase family A, member 3 -2.0844
SDHAF2 succinate dehydrogenase complex assembly factor 2 -2.08135
RUSC1 RUN and SH3 domain containing 1 -2.07679
ZNF300 zinc finger protein 300 -2.06466
ARID5B AT rich interactive domain 5B (MRF1-like) -2.0486
RBP5 retinol binding protein 5, cellular -2.0486
BBOF1 basal body orientation factor 1 -2.0486
GPBP1 GC-rich promoter binding protein 1 -2.03846
AMACR alpha-methylacyl-CoA racemase -2.03246
TMEM106A transmembrane protein 106A -2.0229
AVIL advillin -2.02063
OLA1 Obg-like ATPase 1 -2.02023
ARRDC3 arrestin domain containing 3 -2.01956
SCAMP3 secretory carrier membrane protein 3 -2.01755
WNK2 WNK lysine deficient protein kinase 2 -2.01023