SHP-77 Gene Set

Dataset COSMIC Cell Line Gene CNV Profiles
Category genomics
Type cell line
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Genes

74 genes with high or low copy number in SHP-77 relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.

high copy number

Symbol Name Standardized Value
XAGE2 X antigen family, member 2 2.14731
SSX7 synovial sarcoma, X breakpoint 7 2.14731
XAGE1B X antigen family, member 1B 2.14731
SSX8 synovial sarcoma, X breakpoint 8 2.14731
USP32P1 ubiquitin specific peptidase 32 pseudogene 1 2.12484
ZNF287 zinc finger protein 287 2.12439
CENPV centromere protein V 2.12439
TNFRSF13B tumor necrosis factor receptor superfamily, member 13B 2.12439
TRPV2 transient receptor potential cation channel, subfamily V, member 2 2.12439
FAM106CP family with sequence similarity 106, member C, pseudogene 2.12439
KRT16P2 keratin 16 pseudogene 2 2.12439
UBB ubiquitin B 2.12439
CCDC144A coiled-coil domain containing 144A 2.12439
ZNF624 zinc finger protein 624 2.12439
MIR1288 microRNA 1288 2.12439
MPRIP myosin phosphatase Rho interacting protein 2.12439
SNORD49A small nucleolar RNA, C/D box 49A 2.12439
SNORD49B small nucleolar RNA, C/D box 49B 2.12439
RASD1 RAS, dexamethasone-induced 1 2.12225
NT5M 5',3'-nucleotidase, mitochondrial 2.12225
MED9 mediator complex subunit 9 2.12225
FLCN folliculin 2.12225
PLD6 phospholipase D family, member 6 2.12225
COPS3 COP9 signalosome subunit 3 2.12225
PIGL phosphatidylinositol glycan anchor biosynthesis, class L 2.11167
NCOR1 nuclear receptor corepressor 1 2.10317
ZSWIM7 zinc finger, SWIM-type containing 7 2.10038
ADORA2B adenosine A2b receptor 2.10038
TTC19 tetratricopeptide repeat domain 19 2.10038
SNORD65 small nucleolar RNA, C/D box 65 2.08391

low copy number

Symbol Name Standardized Value
MIR1305 microRNA 1305 -3.61078
MGC45800 -3.57558
TENM3 teneurin transmembrane protein 3 -3.56449
ABCC6 ATP-binding cassette, sub-family C (CFTR/MRP), member 6 -3.24687
BMS1P6 BMS1 ribosome biogenesis factor pseudogene 6 -3.05881
FAM25C family with sequence similarity 25, member C -3.05881
LINC00842 long intergenic non-protein coding RNA 842 -3.05881
HNRNPA1P33 heterogeneous nuclear ribonucleoprotein A1 pseudogene 33 -3.05881
AGAP9 ArfGAP with GTPase domain, ankyrin repeat and PH domain 9 -3.05881
NPY4R neuropeptide Y receptor Y4 -3.05881
NOMO3 NODAL modulator 3 -3.05196
MIR3156-3 microRNA 3156-3 -3.03592
GLUD1P7 glutamate dehydrogenase 1 pseudogene 7 -3.03082
SYT15 synaptotagmin XV -3.03082
ANXA8 annexin A8 -3.00044
GPRIN2 G protein regulated inducer of neurite outgrowth 2 -2.99615
TEKT4P2 tektin 4 pseudogene 2 -2.9644
FAM35BP family with sequence similarity 35, member A pseudogene -2.9644
CHODL chondrolectin -2.94975
TMPRSS15 transmembrane protease, serine 15 -2.94975
SAMSN1 SAM domain, SH3 domain and nuclear localization signals 1 -2.92126
USP25 ubiquitin specific peptidase 25 -2.91868
MIRLET7C microRNA let-7c -2.91612
ANKRD20A11P ankyrin repeat domain 20 family, member A11, pseudogene -2.91612
C21ORF91 chromosome 21 open reading frame 91 -2.91612
ABCC13 ATP-binding cassette, sub-family C (CFTR/MRP), member 13, pseudogene -2.91612
POTED POTE ankyrin domain family, member D -2.91612
MIR99A microRNA 99a -2.91612
C21ORF91-OT1 C21orf91 overlapping transcript 1 -2.91612
BTG3 BTG family, member 3 -2.91612
CHODL-AS1 CHODL antisense RNA 1 -2.91612
MIR125B2 microRNA 125b-2 -2.91612
HSPA13 heat shock protein 70kDa family, member 13 -2.91612
RBM11 RNA binding motif protein 11 -2.91268
SAMSN1-AS1 SAMSN1 antisense RNA 1 -2.89373
LOC388813 uncharacterized protein ENSP00000383407-like -2.89373
CXADR coxsackie virus and adenovirus receptor -2.89201
LINC01549 long intergenic non-protein coding RNA 1549 -2.89201
LIPI lipase, member I -2.88947
NRIP1 nuclear receptor interacting protein 1 -2.8792
SNORD74 small nucleolar RNA, C/D box 74 -2.86885
TPTE transmembrane phosphatase with tensin homology -2.86003
FFAR3 free fatty acid receptor 3 -2.76158
BTNL3 butyrophilin-like 3 -2.72661