SK-CO-1 Gene Set

Dataset Sanger Dependency Map Cancer Cell Line Proteomics
Category proteomics
Type cell line
Description cell line derived from Colorectal Carcinoma Metastasis (Cell Model Passports, SIDM01096)
External Link https://cellmodelpassports.sanger.ac.uk/passports/SIDM01096
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Genes

196 proteins associated with the cell line SK-CO-1 from the Sanger Dependency Map Cancer Cell Line Proteomics dataset.

Symbol Name
ACAA1 acetyl-CoA acyltransferase 1
ACAA2 acetyl-CoA acyltransferase 2
ACOX1 acyl-CoA oxidase 1, palmitoyl
AK3 adenylate kinase 3
ALDH1B1 aldehyde dehydrogenase 1 family, member B1
ALDH2 aldehyde dehydrogenase 2 family (mitochondrial)
ALDH3A2 aldehyde dehydrogenase 3 family, member A2
AMACR alpha-methylacyl-CoA racemase
ANKHD1 ankyrin repeat and KH domain containing 1
ANKRD22 ankyrin repeat domain 22
ATG16L1 autophagy related 16-like 1 (S. cerevisiae)
ATP1A1 ATPase, Na+/K+ transporting, alpha 1 polypeptide
BRCC3 BRCA1/BRCA2-containing complex, subunit 3
C1D C1D nuclear receptor corepressor
C2CD2 C2 calcium-dependent domain containing 2
CAMKK2 calcium/calmodulin-dependent protein kinase kinase 2, beta
CANT1 calcium activated nucleotidase 1
CDCA2 cell division cycle associated 2
CEACAM1 carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5
CROCC ciliary rootlet coiled-coil, rootletin
DDT D-dopachrome tautomerase
DHRS4 dehydrogenase/reductase (SDR family) member 4
DHRS7 dehydrogenase/reductase (SDR family) member 7
DLD dihydrolipoamide dehydrogenase
DLST dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)
DNAJC1 DnaJ (Hsp40) homolog, subfamily C, member 1
DOCK6 dedicator of cytokinesis 6
EIF1B eukaryotic translation initiation factor 1B
FDXR ferredoxin reductase
FIS1 fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae)
FURIN furin (paired basic amino acid cleaving enzyme)
FXN frataxin
GFM1 G elongation factor, mitochondrial 1
GGH gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)
GMDS GDP-mannose 4,6-dehydratase
GNPNAT1 glucosamine-phosphate N-acetyltransferase 1
HIBCH 3-hydroxyisobutyryl-CoA hydrolase
HIST1H2APS2 histone cluster 1, H2a, pseudogene 2
HPDL 4-hydroxyphenylpyruvate dioxygenase-like
INF2 inverted formin, FH2 and WH2 domain containing
KIAA0319L KIAA0319-like
KIAA1671 KIAA1671
L2HGDH L-2-hydroxyglutarate dehydrogenase
LAMP1 lysosomal-associated membrane protein 1
LAMTOR3 late endosomal/lysosomal adaptor, MAPK and MTOR activator 3
LGALS3BP lectin, galactoside-binding, soluble, 3 binding protein
LOC105375028 uncharacterized LOC105375028
LOC442389 interferon induced transmembrane protein pseudogene
MBD1 methyl-CpG binding domain protein 1
ME2 malic enzyme 2, NAD(+)-dependent, mitochondrial
MED12 mediator complex subunit 12
MED13 mediator complex subunit 13
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase
MIA2 melanoma inhibitory activity 2
MIF macrophage migration inhibitory factor (glycosylation-inhibiting factor)
MIPEP mitochondrial intermediate peptidase
MLEC malectin
MYO5B myosin VB
NIPSNAP1 nipsnap homolog 1 (C. elegans)
NR2C2 nuclear receptor subfamily 2, group C, member 2
NT5C3A 5'-nucleotidase, cytosolic IIIA
PCCA propionyl CoA carboxylase, alpha polypeptide
PCCB propionyl CoA carboxylase, beta polypeptide
PDIA4 protein disulfide isomerase family A, member 4
PEX19 peroxisomal biogenesis factor 19
PLEKHG3 pleckstrin homology domain containing, family G (with RhoGef domain) member 3
POLR1B polymerase (RNA) I polypeptide B, 128kDa
POR P450 (cytochrome) oxidoreductase
PTCD1 pentatricopeptide repeat domain 1
RAF1 Raf-1 proto-oncogene, serine/threonine kinase
RANBP2 RAN binding protein 2
RDH11 retinol dehydrogenase 11 (all-trans/9-cis/11-cis)
RNF149 ring finger protein 149
RNY3P9 RNA, Ro-associated Y3 pseudogene 9
SBF1 SET binding factor 1
SEC62 SEC62 homolog (S. cerevisiae)
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2
SLC12A9 solute carrier family 12, member 9
STXBP4 syntaxin binding protein 4
SUCLA2 succinate-CoA ligase, ADP-forming, beta subunit
SYNJ2BP synaptojanin 2 binding protein
SYPL1 synaptophysin-like 1
TARS2 threonyl-tRNA synthetase 2, mitochondrial (putative)
TBCD tubulin folding cofactor D
TCP11L1 t-complex 11, testis-specific-like 1
TM7SF3 transmembrane 7 superfamily member 3
TMEM201 transmembrane protein 201
TMEM59 transmembrane protein 59
TMEM63A transmembrane protein 63A
TMX1 thioredoxin-related transmembrane protein 1
TRMT5 tRNA methyltransferase 5
TTC19 tetratricopeptide repeat domain 19
VN1R110P vomeronasal 1 receptor 110 pseudogene
VTI1B vesicle transport through interaction with t-SNAREs 1B
VWA8 von Willebrand factor A domain containing 8
WDR13 WD repeat domain 13
ZBTB32 zinc finger and BTB domain containing 32
ZDHHC20 zinc finger, DHHC-type containing 20

Symbol Name
AAMP angio-associated, migratory cell protein
AASTH16 Allergic/atopic asthma related QTL 16
ALPPL2 alkaline phosphatase, placental-like 2
ANAPC16 anaphase promoting complex subunit 16
AQR aquarius intron-binding spliceosomal factor
ARFGEF3 ARFGEF family member 3
ARID1B AT rich interactive domain 1B (SWI1-like)
ATAD3B ATPase family, AAA domain containing 3B
ATP2A3 ATPase, Ca++ transporting, ubiquitous
BCAS2 breast carcinoma amplified sequence 2
C5ORF15 chromosome 5 open reading frame 15
C5ORF22 chromosome 5 open reading frame 22
C7ORF50 chromosome 7 open reading frame 50
CCDC43 coiled-coil domain containing 43
CHMP7 charged multivesicular body protein 7
CHORDC1 cysteine and histidine-rich domain (CHORD) containing 1
CKAP2 cytoskeleton associated protein 2
CLCN3 chloride channel, voltage-sensitive 3
CMSS1 cms1 ribosomal small subunit homolog (yeast)
COX19 COX19 cytochrome c oxidase assembly factor
CRELD1 cysteine-rich with EGF-like domains 1
CSTF1 cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa
CTNNBL1 catenin, beta like 1
DBR1 debranching RNA lariats 1
DCAF8 DDB1 and CUL4 associated factor 8
DNAJC8 DnaJ (Hsp40) homolog, subfamily C, member 8
DNASE1L1 deoxyribonuclease I-like 1
ELL elongation factor RNA polymerase II
ELMO2 engulfment and cell motility 2
EPB41 erythrocyte membrane protein band 4.1
EPN1 epsin 1
EXOSC3 exosome component 3
F3 coagulation factor III (thromboplastin, tissue factor)
FCRLA Fc receptor-like A
FILIP1 filamin A interacting protein 1
FOXC1 forkhead box C1
FXR1 fragile X mental retardation, autosomal homolog 1
GLMN glomulin, FKBP associated protein
GPATCH11 G patch domain containing 11
GTF3C2 general transcription factor IIIC, polypeptide 2, beta 110kDa
HBS1L HBS1-like translational GTPase
HDAC6 histone deacetylase 6
IRF3 interferon regulatory factor 3
IRF4 interferon regulatory factor 4
ISY1 ISY1 splicing factor homolog (S. cerevisiae)
LAMA1 laminin, alpha 1
LMAN1 lectin, mannose-binding, 1
MAD2L1 MAD2 mitotic arrest deficient-like 1 (yeast)
MAEA macrophage erythroblast attacher
MAP3K20 mitogen-activated protein kinase kinase kinase 20
MGAT1 mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase
MIR3910-2 microRNA 3910-2
MLST8 MTOR associated protein, LST8 homolog (S. cerevisiae)
MMAA methylmalonic aciduria (cobalamin deficiency) cblA type
MOCS1 molybdenum cofactor synthesis 1
MYO5C myosin VC
NCAPD2 non-SMC condensin I complex, subunit D2
NLRP1 NLR family, pyrin domain containing 1
NOL8 nucleolar protein 8
NOTCH2 notch 2
NPHS1 nephrosis 1, congenital, Finnish type (nephrin)
NR2C2AP nuclear receptor 2C2-associated protein
NRGN neurogranin (protein kinase C substrate, RC3)
OAS3 2'-5'-oligoadenylate synthetase 3, 100kDa
OPA3 optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)
PARVA parvin, alpha
PFN2 profilin 2
PLCL2 phospholipase C-like 2
PLD2 phospholipase D2
POLDIP3 polymerase (DNA-directed), delta interacting protein 3
POLR2B polymerase (RNA) II (DNA directed) polypeptide B, 140kDa
PPP2R5D protein phosphatase 2, regulatory subunit B', delta
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1
RECQL RecQ helicase-like
RFC2 replication factor C (activator 1) 2, 40kDa
RUNX2 runt-related transcription factor 2
SETD7 SET domain containing (lysine methyltransferase) 7
SIRT5 sirtuin 5
SNAPC4 small nuclear RNA activating complex, polypeptide 4, 190kDa
SP100 SP100 nuclear antigen
SPEN spen family transcriptional repressor
SRXN1 sulfiredoxin 1
TAOK2 TAO kinase 2
TERF2IP telomeric repeat binding factor 2, interacting protein
TRAJ9 T cell receptor alpha joining 9
TRIM21 tripartite motif containing 21
TRMT61A tRNA methyltransferase 61A
TRMT61B tRNA methyltransferase 61B
TUBB8 tubulin, beta 8 class VIII
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1
VAMP3 vesicle-associated membrane protein 3
XYLB xylulokinase homolog (H. influenzae)
ZC3H18 zinc finger CCCH-type containing 18
ZNF557 zinc finger protein 557
ZNF622 zinc finger protein 622
ZWILCH zwilch kinetochore protein