SK-MEL-28 Gene Set

Dataset Sanger Dependency Map Cancer Cell Line Proteomics
Category proteomics
Type cell line
External Link https://cellmodelpassports.sanger.ac.uk/passports/SIDM00081
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Genes

198 proteins associated with the cell line SK-MEL-28 from the Sanger Dependency Map Cancer Cell Line Proteomics dataset.

Symbol Name
ACO2 aconitase 2, mitochondrial
ACOT7 acyl-CoA thioesterase 7
ACSL3 acyl-CoA synthetase long-chain family member 3
ARL6IP5 ADP-ribosylation factor-like 6 interacting protein 5
ASAH1 N-acylsphingosine amidohydrolase (acid ceramidase) 1
ATAD3A ATPase family, AAA domain containing 3A
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide
B3GAT3 beta-1,3-glucuronyltransferase 3
BCL2L13 BCL2-like 13 (apoptosis facilitator)
BCS1L BC1 (ubiquinol-cytochrome c reductase) synthesis-like
CAMSAP2 calmodulin regulated spectrin-associated protein family, member 2
CD109 CD109 molecule
CD63 CD63 molecule
CD81 CD81 molecule
CEACAM1 carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)
CLCN7 chloride channel, voltage-sensitive 7
CYB5R1 cytochrome b5 reductase 1
CYP27A1 cytochrome P450, family 27, subfamily A, polypeptide 1
CYP51A1 cytochrome P450, family 51, subfamily A, polypeptide 1
DHRS1 dehydrogenase/reductase (SDR family) member 1
DNAJC11 DnaJ (Hsp40) homolog, subfamily C, member 11
DPM1 dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit
EFL1 elongation factor like GTPase 1
ERGIC3 ERGIC and golgi 3
FAM210B family with sequence similarity 210, member B
FBLL1 fibrillarin-like 1
GCLC glutamate-cysteine ligase, catalytic subunit
GGCX gamma-glutamyl carboxylase
GHRH growth hormone releasing hormone
GLA galactosidase, alpha
GNAI3 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3
GRIPAP1 GRIP1 associated protein 1
HADHA hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit
HADHB hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit
HEXA hexosaminidase A (alpha polypeptide)
HNRNPA3 heterogeneous nuclear ribonucleoprotein A3
HSD17B12 hydroxysteroid (17-beta) dehydrogenase 12
IGSF8 immunoglobulin superfamily, member 8
IL1RAP interleukin 1 receptor accessory protein
IMMT inner membrane protein, mitochondrial
KIAA2013 KIAA2013
LMF2 lipase maturation factor 2
LOC100129636 uncharacterized LOC100129636
LOC105378547 uncharacterized LOC105378547
MAP2K6 mitogen-activated protein kinase kinase 6
MCAM melanoma cell adhesion molecule
METTL9 methyltransferase like 9
MICALL1 MICAL-like 1
MKKS McKusick-Kaufman syndrome
MTX1 metaxin 1
MTX2 metaxin 2
MYO5A myosin VA (heavy chain 12, myoxin)
NARS2 asparaginyl-tRNA synthetase 2, mitochondrial (putative)
NCOR1 nuclear receptor corepressor 1
NDUFA10 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa
NDUFA8 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8, 19kDa
NDUFA9 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa
NDUFAF3 NADH dehydrogenase (ubiquinone) complex I, assembly factor 3
NDUFAF4 NADH dehydrogenase (ubiquinone) complex I, assembly factor 4
NDUFB3 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 3, 12kDa
NDUFC2 NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2, 14.5kDa
NDUFS2 NADH dehydrogenase (ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q reductase)
NDUFS7 NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase)
OPA1 optic atrophy 1 (autosomal dominant)
OTUD6B OTU domain containing 6B
PDIA5 protein disulfide isomerase family A, member 5
POLG polymerase (DNA directed), gamma
PRNP prion protein
QPCTL glutaminyl-peptide cyclotransferase-like
RAB27A RAB27A, member RAS oncogene family
RAB32 RAB32, member RAS oncogene family
RAB7A RAB7A, member RAS oncogene family
RETSAT retinol saturase (all-trans-retinol 13,14-reductase)
RPL36AP9 ribosomal protein L36a pseudogene 9
RSRC2 arginine/serine-rich coiled-coil 2
SACM1L SAC1 suppressor of actin mutations 1-like (yeast)
SAMM50 SAMM50 sorting and assembly machinery component
SEC22B SEC22 vesicle trafficking protein homolog B (S. cerevisiae) (gene/pseudogene)
SEC61G Sec61 gamma subunit
SIRPA signal-regulatory protein alpha
SLC1A4 solute carrier family 1 (glutamate/neutral amino acid transporter), member 4
SLC22A18 solute carrier family 22, member 18
SLC27A3 solute carrier family 27 (fatty acid transporter), member 3
SLC35B2 solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B2
SOAT1 sterol O-acyltransferase 1
SORT1 sortilin 1
SSR1 signal sequence receptor, alpha
STRBP spermatid perinuclear RNA binding protein
STX7 syntaxin 7
SYNGR1 synaptogyrin 1
TCN1 transcobalamin I (vitamin B12 binding protein, R binder family)
TIMM50 translocase of inner mitochondrial membrane 50 homolog (S. cerevisiae)
TIMMDC1 translocase of inner mitochondrial membrane domain containing 1
TMEM214 transmembrane protein 214
TMX4 thioredoxin-related transmembrane protein 4
TRABD TraB domain containing
UQCRFS1 ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1
VKORC1 vitamin K epoxide reductase complex, subunit 1
WAPL WAPL cohesin release factor
WDFY1 WD repeat and FYVE domain containing 1

Symbol Name
ABI1 abl-interactor 1
ALDH5A1 aldehyde dehydrogenase 5 family, member A1
ARCN1 archain 1
ARL3 ADP-ribosylation factor-like 3
ASCC2 activating signal cointegrator 1 complex subunit 2
ATN1 atrophin 1
ATXN2 ataxin 2
CAMK4 calcium/calmodulin-dependent protein kinase IV
CAMKV CaM kinase-like vesicle-associated
CBX5 chromobox homolog 5
CCS copper chaperone for superoxide dismutase
CELF1 CUGBP, Elav-like family member 1
CERCAM cerebral endothelial cell adhesion molecule
CHMP1A charged multivesicular body protein 1A
CHRAC1 chromatin accessibility complex 1
COG6 component of oligomeric golgi complex 6
CORO7 coronin 7
CPSF7 cleavage and polyadenylation specific factor 7, 59kDa
CSRP2 cysteine and glycine-rich protein 2
DBNL drebrin-like
DCTN5 dynactin 5 (p25)
DDX42 DEAD (Asp-Glu-Ala-Asp) box helicase 42
DNAJA2 DnaJ (Hsp40) homolog, subfamily A, member 2
DNAJC2 DnaJ (Hsp40) homolog, subfamily C, member 2
DYNC2H1 dynein, cytoplasmic 2, heavy chain 1
EDC3 enhancer of mRNA decapping 3
EDC4 enhancer of mRNA decapping 4
EPB41L1 erythrocyte membrane protein band 4.1-like 1
ERI1 exoribonuclease 1
FAM114A2 family with sequence similarity 114, member A2
FKBP15 FK506 binding protein 15, 133kDa
FNBP4 formin binding protein 4
FOXK1 forkhead box K1
GABPA GA binding protein transcription factor, alpha subunit 60kDa
GAPVD1 GTPase activating protein and VPS9 domains 1
GEMIN5 gem (nuclear organelle) associated protein 5
GTF2I general transcription factor IIi
HSP90AB2P heat shock protein 90kDa alpha (cytosolic), class B member 2, pseudogene
IDE insulin-degrading enzyme
ISY1 ISY1 splicing factor homolog (S. cerevisiae)
KRT75 keratin 75, type II
LSM1 LSM1, U6 small nuclear RNA associated
MOCS1 molybdenum cofactor synthesis 1
NCK2 NCK adaptor protein 2
NCOR2 nuclear receptor corepressor 2
NELFA negative elongation factor complex member A
NEMF nuclear export mediator factor
NFYC nuclear transcription factor Y, gamma
NLGN1 neuroligin 1
NTF3 neurotrophin 3
NTMT1 N-terminal Xaa-Pro-Lys N-methyltransferase 1
NUDCD2 NudC domain containing 2
NXN nucleoredoxin
PCYT1A phosphate cytidylyltransferase 1, choline, alpha
PEX19 peroxisomal biogenesis factor 19
PLSCR3 phospholipid scramblase 3
POLD2 polymerase (DNA directed), delta 2, accessory subunit
PPA1 pyrophosphatase (inorganic) 1
PPM1G protein phosphatase, Mg2+/Mn2+ dependent, 1G
PPP1R12A protein phosphatase 1, regulatory subunit 12A
PPP6C protein phosphatase 6, catalytic subunit
PRDX2 peroxiredoxin 2
PRRC2A proline-rich coiled-coil 2A
PTPRK protein tyrosine phosphatase, receptor type, K
PUM1 pumilio RNA-binding family member 1
RAVER1 ribonucleoprotein, PTB-binding 1
RIF1 replication timing regulatory factor 1
RMI2 RecQ mediated genome instability 2
RNF167 ring finger protein 167
RNF40 ring finger protein 40, E3 ubiquitin protein ligase
RNY3P9 RNA, Ro-associated Y3 pseudogene 9
RPAP3 RNA polymerase II associated protein 3
RTF1 Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
SAMD1 sterile alpha motif domain containing 1
SEPHS1 selenophosphate synthetase 1
SF1 splicing factor 1
SLAIN2 SLAIN motif family, member 2
SLC4A1AP solute carrier family 4 (anion exchanger), member 1, adaptor protein
SMYD3 SET and MYND domain containing 3
STRIP1 striatin interacting protein 1
STX17 syntaxin 17
STX2 syntaxin 2
SZRD1 SUZ RNA binding domain containing 1
TAF5 TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa
TERF2IP telomeric repeat binding factor 2, interacting protein
THYN1 thymocyte nuclear protein 1
TMPPE transmembrane protein with metallophosphoesterase domain
TRIO trio Rho guanine nucleotide exchange factor
TSNAX translin-associated factor X
TTC22 tetratricopeptide repeat domain 22
TTC4 tetratricopeptide repeat domain 4
TUBAL3 tubulin, alpha-like 3
UBE2B ubiquitin-conjugating enzyme E2B
UBR5 ubiquitin protein ligase E3 component n-recognin 5
USP10 ubiquitin specific peptidase 10
YJU2 YJU2 splicing factor homolog
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma
ZNF830 zinc finger protein 830