SKG-IIIa Gene Set

Dataset Sanger Dependency Map Cancer Cell Line Proteomics
Category proteomics
Type cell line
Description cell line derived from Cervical Carcinoma Tumour (Cell Model Passports, SIDM00381)
External Link https://cellmodelpassports.sanger.ac.uk/passports/SIDM00381
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Genes

194 proteins associated with the cell line SKG-IIIa from the Sanger Dependency Map Cancer Cell Line Proteomics dataset.

Symbol Name
AAMDC adipogenesis associated, Mth938 domain containing
ACADS acyl-CoA dehydrogenase, C-2 to C-3 short chain
ACADVL acyl-CoA dehydrogenase, very long chain
ACSF2 acyl-CoA synthetase family member 2
AGL amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase
ALDH3B1 aldehyde dehydrogenase 3 family, member B1
ALDH5A1 aldehyde dehydrogenase 5 family, member A1
ALDH6A1 aldehyde dehydrogenase 6 family, member A1
AP1B1 adaptor-related protein complex 1, beta 1 subunit
APOLD1 apolipoprotein L domain containing 1
ATP1A3 ATPase, Na+/K+ transporting, alpha 3 polypeptide
BAD BCL2-associated agonist of cell death
BCAM basal cell adhesion molecule (Lutheran blood group)
BCL2L13 BCL2-like 13 (apoptosis facilitator)
BLVRB biliverdin reductase B
BPHL biphenyl hydrolase-like (serine hydrolase)
BRINP1 bone morphogenetic protein/retinoic acid inducible neural-specific 1
CAPN1 calpain 1, (mu/I) large subunit
CCDC90B coiled-coil domain containing 90B
CCS copper chaperone for superoxide dismutase
CLINT1 clathrin interactor 1
CLPB ClpB homolog, mitochondrial AAA ATPase chaperonin
CLTB clathrin, light chain B
CYB5A cytochrome b5 type A (microsomal)
CYB5B cytochrome b5 type B (outer mitochondrial membrane)
DCXR dicarbonyl/L-xylulose reductase
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17
DEL1Q43Q44 Chromosome 1q42-q44 deletion syndrome
DHRS1 dehydrogenase/reductase (SDR family) member 1
DHTKD1 dehydrogenase E1 and transketolase domain containing 1
DHX40 DEAH (Asp-Glu-Ala-His) box polypeptide 40
DNM3 dynamin 3
DNMT3A DNA (cytosine-5-)-methyltransferase 3 alpha
DTNBP1 dystrobrevin binding protein 1
ECHS1 enoyl CoA hydratase, short chain, 1, mitochondrial
ECI2 enoyl-CoA delta isomerase 2
EHBP1L1 EH domain binding protein 1-like 1
EML2 echinoderm microtubule associated protein like 2
EPN3 epsin 3
EPPK1 epiplakin 1
ERH enhancer of rudimentary homolog (Drosophila)
EXD2 exonuclease 3'-5' domain containing 2
FAM169A family with sequence similarity 169, member A
FARS2 phenylalanyl-tRNA synthetase 2, mitochondrial
FGFR1OP2 FGFR1 oncogene partner 2
FLOT2 flotillin 2
GLG1 golgi glycoprotein 1
GM2A GM2 ganglioside activator
HADHB hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit
HNRNPH3 heterogeneous nuclear ribonucleoprotein H3 (2H9)
HNRNPUL1 heterogeneous nuclear ribonucleoprotein U-like 1
HPDL 4-hydroxyphenylpyruvate dioxygenase-like
HSPA2 heat shock 70kDa protein 2
HSPA4L heat shock 70kDa protein 4-like
INTS7 integrator complex subunit 7
LLGL1 lethal giant larvae homolog 1 (Drosophila)
LOC105375028 uncharacterized LOC105375028
MACROD1 MACRO domain containing 1
MAPKAPK5 mitogen-activated protein kinase-activated protein kinase 5
MECR mitochondrial trans-2-enoyl-CoA reductase
MPRIP myosin phosphatase Rho interacting protein
MRPS18B mitochondrial ribosomal protein S18B
MTX2 metaxin 2
NARS2 asparaginyl-tRNA synthetase 2, mitochondrial (putative)
NCF4 neutrophil cytosolic factor 4, 40kDa
NUDT8 nudix (nucleoside diphosphate linked moiety X)-type motif 8
NUF2 NUF2, NDC80 kinetochore complex component
NUMA1 nuclear mitotic apparatus protein 1
OPA3 optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)
PC pyruvate carboxylase
PCBD2 pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2
PI4KB phosphatidylinositol 4-kinase, catalytic, beta
PLD3 phospholipase D family, member 3
PPP1CA protein phosphatase 1, catalytic subunit, alpha isozyme
PPP1R13L protein phosphatase 1, regulatory subunit 13 like
PRCP prolylcarboxypeptidase (angiotensinase C)
PRDX5 peroxiredoxin 5
PRKRA protein kinase, interferon-inducible double stranded RNA dependent activator
PTBP2 polypyrimidine tract binding protein 2
QSER1 glutamine and serine rich 1
RSF1 remodeling and spacing factor 1
RTN3 reticulon 3
SARS2 seryl-tRNA synthetase 2, mitochondrial
SIRT5 sirtuin 5
SLC1A3 solute carrier family 1 (glial high affinity glutamate transporter), member 3
SLC7A6OS solute carrier family 7, member 6 opposite strand
SMPDL3B sphingomyelin phosphodiesterase, acid-like 3B
SRCIN1 SRC kinase signaling inhibitor 1
SRSF9 serine/arginine-rich splicing factor 9
STEAP4 STEAP family member 4
SYNE2 spectrin repeat containing, nuclear envelope 2
TMED1 transmembrane emp24 protein transport domain containing 1
TNFAIP2 tumor necrosis factor, alpha-induced protein 2
TST thiosulfate sulfurtransferase (rhodanese)
USP16 ubiquitin specific peptidase 16
WRNIP1 Werner helicase interacting protein 1
XRCC1 X-ray repair complementing defective repair in Chinese hamster cells 1

Symbol Name
ABLIM1 actin binding LIM protein 1
ACSL4 acyl-CoA synthetase long-chain family member 4
AKAP12 A kinase (PRKA) anchor protein 12
ALDH7A1 aldehyde dehydrogenase 7 family, member A1
AMPH amphiphysin
ANKRD30B ankyrin repeat domain 30B
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1
ASPSCR1 alveolar soft part sarcoma chromosome region, candidate 1
AURKB aurora kinase B
BCL10 B-cell CLL/lymphoma 10
BLOC1S6 biogenesis of lysosomal organelles complex-1, subunit 6, pallidin
BYSL bystin-like
C5ORF22 chromosome 5 open reading frame 22
CCDC117 coiled-coil domain containing 117
CCNT1 cyclin T1
CHMP2A charged multivesicular body protein 2A
CPS1 carbamoyl-phosphate synthase 1, mitochondrial
DAD1 defender against cell death 1
DAXX death-domain associated protein
DIDO1 death inducer-obliterator 1
DUSP12 dual specificity phosphatase 12
EOGT EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase
EPHB2 EPH receptor B2
GNG2 guanine nucleotide binding protein (G protein), gamma 2
GPATCH8 G patch domain containing 8
GRN granulin
GRWD1 glutamate-rich WD repeat containing 1
GTF2E2 general transcription factor IIE, polypeptide 2, beta 34kDa
H1-1 H1.1 linker histone, cluster member
HMGN3 high mobility group nucleosomal binding domain 3
HSP90AB2P heat shock protein 90kDa alpha (cytosolic), class B member 2, pseudogene
INTS1 integrator complex subunit 1
ITCH itchy E3 ubiquitin protein ligase
JAGN1 jagunal homolog 1 (Drosophila)
LOC105369341 uncharacterized LOC105369341
LRRC8D leucine rich repeat containing 8 family, member D
LSM14B LSM14B, SCD6 homolog B (S. cerevisiae)
MCRIP2 MAPK regulated corepressor interacting protein 2
MORF4L1 mortality factor 4 like 1
MPP1 membrane protein, palmitoylated 1, 55kDa
MPP6 membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)
MPPE1 metallophosphoesterase 1
MREG melanoregulin
MRM1 mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae)
MTG1 mitochondrial ribosome-associated GTPase 1
MUL1 mitochondrial E3 ubiquitin protein ligase 1
MYO5C myosin VC
NAB2 NGFI-A binding protein 2 (EGR1 binding protein 2)
NDUFAF3 NADH dehydrogenase (ubiquinone) complex I, assembly factor 3
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive
NME7 NME/NM23 family member 7
PARS2 prolyl-tRNA synthetase 2, mitochondrial (putative)
PDE3A phosphodiesterase 3A, cGMP-inhibited
PIP4P1 phosphatidylinositol-4,5-bisphosphate 4-phosphatase 1
PODXL2 podocalyxin-like 2
POLR1C polymerase (RNA) I polypeptide C, 30kDa
POLR1D polymerase (RNA) I polypeptide D, 16kDa
PPM1B protein phosphatase, Mg2+/Mn2+ dependent, 1B
PRNP prion protein
QSOX1 quiescin Q6 sulfhydryl oxidase 1
RAB6B RAB6B, member RAS oncogene family
RARS2 arginyl-tRNA synthetase 2, mitochondrial
RBM7 RNA binding motif protein 7
RGS22 regulator of G-protein signaling 22
RNF113A ring finger protein 113A
RPAP1 RNA polymerase II associated protein 1
RPF2 ribosome production factor 2 homolog (S. cerevisiae)
RPIA ribose 5-phosphate isomerase A
RPL37A ribosomal protein L37a
SAFB2 scaffold attachment factor B2
SCEL sciellin
SDHAF3 succinate dehydrogenase complex assembly factor 3
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3
SMG9 SMG9 nonsense mediated mRNA decay factor
SNAP23 synaptosomal-associated protein, 23kDa
SNF8 SNF8, ESCRT-II complex subunit
SNUPN snurportin 1
SNX29P2 sorting nexin 29 pseudogene 2
SRSF2 serine/arginine-rich splicing factor 2
STEAP3 STEAP family member 3, metalloreductase
SUGP2 SURP and G patch domain containing 2
SYF2 SYF2 pre-mRNA-splicing factor
TCEAL4 transcription elongation factor A (SII)-like 4
TIMM8B translocase of inner mitochondrial membrane 8 homolog B (yeast)
TMEM199 transmembrane protein 199
TNIK TRAF2 and NCK interacting kinase
TRAPPC4 trafficking protein particle complex 4
TRIM72 tripartite motif containing 72, E3 ubiquitin protein ligase
TSPAN6 tetraspanin 6
TTTY16 testis-specific transcript, Y-linked 16 (non-protein coding)
UBE2T ubiquitin-conjugating enzyme E2T
VPS37B vacuolar protein sorting 37 homolog B (S. cerevisiae)
WRAP53 WD repeat containing, antisense to TP53
YTHDF1 YTH N(6)-methyladenosine RNA binding protein 1
ZC3H6 zinc finger CCCH-type containing 6
ZHX2 zinc fingers and homeoboxes 2
ZNF592 zinc finger protein 592